FC930796

Overview
NameFC930796
Unique NameFC930796
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length674
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930796 vs. ExPASy Swiss-Prot
Match: KPRS_SALTI (Ribose-phosphate pyrophosphokinase OS=Salmonella typhi GN=prs PE=3 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 1.682e-13
Identity = 34/69 (49.28%), Postives = 50/69 (72.46%), Query Frame = 1
Query:  466 IKLFSGTANPALSQEIACYMGVELGKINIKRFADGEIYVQLQESVRGCDVYLVQPTCPPGNENLMELLI 672
            +KLF+G A P L+Q IA  +   LG   + RF+DGE+ VQ+ E+VRG D++++Q TC P N+NLMEL++
Sbjct:    4 MKLFAGNATPELAQRIANRLYTSLGDAAVGRFSDGEVSVQINENVRGGDIFIIQSTCAPTNDNLMELVV 72          
BLAST of FC930796 vs. ExPASy Swiss-Prot
Match: KPRS_ECOLI (Ribose-phosphate pyrophosphokinase OS=Escherichia coli (strain K12) GN=prs PE=1 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 1.682e-13
Identity = 34/69 (49.28%), Postives = 50/69 (72.46%), Query Frame = 1
Query:  466 IKLFSGTANPALSQEIACYMGVELGKINIKRFADGEIYVQLQESVRGCDVYLVQPTCPPGNENLMELLI 672
            +KLF+G A P L+Q IA  +   LG   + RF+DGE+ VQ+ E+VRG D++++Q TC P N+NLMEL++
Sbjct:    4 MKLFAGNATPELAQRIANRLYTSLGDAAVGRFSDGEVSVQINENVRGGDIFIIQSTCAPTNDNLMELVV 72          
BLAST of FC930796 vs. ExPASy Swiss-Prot
Match: KPRS_ECOL6 (Ribose-phosphate pyrophosphokinase OS=Escherichia coli O6 GN=prs PE=3 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 1.682e-13
Identity = 34/69 (49.28%), Postives = 50/69 (72.46%), Query Frame = 1
Query:  466 IKLFSGTANPALSQEIACYMGVELGKINIKRFADGEIYVQLQESVRGCDVYLVQPTCPPGNENLMELLI 672
            +KLF+G A P L+Q IA  +   LG   + RF+DGE+ VQ+ E+VRG D++++Q TC P N+NLMEL++
Sbjct:    4 MKLFAGNATPELAQRIANRLYTSLGDAAVGRFSDGEVSVQINENVRGGDIFIIQSTCAPTNDNLMELVV 72          
BLAST of FC930796 vs. ExPASy Swiss-Prot
Match: KPRS_ECO57 (Ribose-phosphate pyrophosphokinase OS=Escherichia coli O157:H7 GN=prs PE=3 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 1.682e-13
Identity = 34/69 (49.28%), Postives = 50/69 (72.46%), Query Frame = 1
Query:  466 IKLFSGTANPALSQEIACYMGVELGKINIKRFADGEIYVQLQESVRGCDVYLVQPTCPPGNENLMELLI 672
            +KLF+G A P L+Q IA  +   LG   + RF+DGE+ VQ+ E+VRG D++++Q TC P N+NLMEL++
Sbjct:    4 MKLFAGNATPELAQRIANRLYTSLGDAAVGRFSDGEVSVQINENVRGGDIFIIQSTCAPTNDNLMELVV 72          
BLAST of FC930796 vs. ExPASy Swiss-Prot
Match: KPRS_BUCBP (Ribose-phosphate pyrophosphokinase OS=Buchnera aphidicola subsp. Baizongia pistaciae GN=prs PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.682e-13
Identity = 35/69 (50.72%), Postives = 52/69 (75.36%), Query Frame = 1
Query:  466 IKLFSGTANPALSQEIACYMGVELGKINIKRFADGEIYVQLQESVRGCDVYLVQPTCPPGNENLMELLI 672
            +KLFSG + P L++ IA  + V LG  ++ +F+DGEI VQ+ E+VRG DV+++Q TC P N+NLMEL++
Sbjct:    4 MKLFSGNSVPKLAESIANKLYVNLGNASVGKFSDGEINVQINENVRGSDVFIIQSTCFPTNDNLMELVV 72          
BLAST of FC930796 vs. ExPASy Swiss-Prot
Match: KPRS_BLOFL (Ribose-phosphate pyrophosphokinase OS=Blochmannia floridanus GN=prs PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.682e-13
Identity = 33/69 (47.83%), Postives = 52/69 (75.36%), Query Frame = 1
Query:  466 IKLFSGTANPALSQEIACYMGVELGKINIKRFADGEIYVQLQESVRGCDVYLVQPTCPPGNENLMELLI 672
            +KLF+G A P L+Q IA  + + LG  ++ RF+DGE+ VQ+ E+VRG D++++Q TC P N+NL+EL++
Sbjct:    1 MKLFTGNAIPELAQRIADKLYITLGNASVGRFSDGEVSVQINENVRGGDIFIIQSTCAPTNDNLIELIV 69          
BLAST of FC930796 vs. ExPASy Swiss-Prot
Match: KPRS_RALSO (Ribose-phosphate pyrophosphokinase OS=Ralstonia solanacearum GN=prs PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.197e-13
Identity = 31/69 (44.93%), Postives = 52/69 (75.36%), Query Frame = 1
Query:  466 IKLFSGTANPALSQEIACYMGVELGKINIKRFADGEIYVQLQESVRGCDVYLVQPTCPPGNENLMELLI 672
            + +F+G ANP L++ +  ++ + LGK  + RF+DGE+ V++QE+VRG  V+++Q TC P N+NLMEL++
Sbjct:    6 LMVFTGNANPKLAEAVVKHLNIPLGKALVGRFSDGEVQVEIQENVRGKHVFILQSTCAPTNDNLMELMV 74          
BLAST of FC930796 vs. ExPASy Swiss-Prot
Match: KPRS2_STRMU (Ribose-phosphate pyrophosphokinase 2 OS=Streptococcus mutans GN=prs2 PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.197e-13
Identity = 36/76 (47.37%), Postives = 56/76 (73.68%), Query Frame = 1
Query:  445 NRTTNNRIKLFSGTANPALSQEIACYMGVELGKINIKRFADGEIYVQLQESVRGCDVYLVQPTCPPGNENLMELLI 672
            N   +  +KLFS T+N A++++IA  +GV LGK++ ++F+DGEI + ++ESVRG D+Y++Q T  P N +L ELLI
Sbjct:    3 NAYPDKHLKLFSLTSNTAIAEKIAKVVGVPLGKLSSRQFSDGEIMINIEESVRGNDIYVIQSTSYPVNNHLWELLI 78          
BLAST of FC930796 vs. ExPASy Swiss-Prot
Match: KPRS_BRAJA (Ribose-phosphate pyrophosphokinase OS=Bradyrhizobium japonicum GN=prs PE=3 SV=2)

HSP 1 Score: 75.485 bits (184), Expect = 2.869e-13
Identity = 37/72 (51.39%), Postives = 53/72 (73.61%), Query Frame = 1
Query:  457 NNRIKLFSGTANPALSQEIACYMGVELGKINIKRFADGEIYVQLQESVRGCDVYLVQPTCPPGNENLMELLI 672
            N  IKL +G +NPAL+Q IA  + + L K  ++RFAD EI+V++QE+VRG D +++Q T  P N++LMELLI
Sbjct:    5 NGSIKLVAGNSNPALAQAIAQGLHLPLTKAVVRRFADMEIFVEIQENVRGSDAFIIQSTSFPANDHLMELLI 76          
BLAST of FC930796 vs. ExPASy Swiss-Prot
Match: KPRS1_LACPL (Ribose-phosphate pyrophosphokinase 1 OS=Lactobacillus plantarum GN=prs1 PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 2.869e-13
Identity = 34/70 (48.57%), Postives = 54/70 (77.14%), Query Frame = 1
Query:  463 RIKLFSGTANPALSQEIACYMGVELGKINIKRFADGEIYVQLQESVRGCDVYLVQPTCPPGNENLMELLI 672
            ++K+F+  +N  L+++IA  +GV+LGK ++ RF+DGEI + ++ES+RG  VY++Q T  P N+NLMELLI
Sbjct:    9 KLKIFALNSNKPLAEKIADAVGVKLGKTSVDRFSDGEIRINIEESIRGDQVYIIQSTSAPVNDNLMELLI 78          
The following BLAST results are available for this feature:
BLAST of FC930796 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 144
Match NameE-valueIdentityDescription
KPRS_SALTI1.682e-1349.28Ribose-phosphate pyrophosphokinase OS=Salmonella t... [more]
KPRS_ECOLI1.682e-1349.28Ribose-phosphate pyrophosphokinase OS=Escherichia ... [more]
KPRS_ECOL61.682e-1349.28Ribose-phosphate pyrophosphokinase OS=Escherichia ... [more]
KPRS_ECO571.682e-1349.28Ribose-phosphate pyrophosphokinase OS=Escherichia ... [more]
KPRS_BUCBP1.682e-1350.72Ribose-phosphate pyrophosphokinase OS=Buchnera aph... [more]
KPRS_BLOFL1.682e-1347.83Ribose-phosphate pyrophosphokinase OS=Blochmannia ... [more]
KPRS_RALSO2.197e-1344.93Ribose-phosphate pyrophosphokinase OS=Ralstonia so... [more]
KPRS2_STRMU2.197e-1347.37Ribose-phosphate pyrophosphokinase 2 OS=Streptococ... [more]
KPRS_BRAJA2.869e-1351.39Ribose-phosphate pyrophosphokinase OS=Bradyrhizobi... [more]
KPRS1_LACPL2.869e-1348.57Ribose-phosphate pyrophosphokinase 1 OS=Lactobacil... [more]

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Properties
Property NameValue
Genbank descriptionC34109B05EF PostHarvP1 Citrus clementina cDNA clone C34109B05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930796 ID=FC930796; Name=FC930796; organism=Citrus clementina; type=EST; length=674bp
GATGAAAATCCAAAGCGACGAAGCAAAATAGCCAAAGAAGAAGAAAAAGC
AACCGAAGCTCTCTCTGCCTCCTCACCGTCACCACAAAAACAAAAGGAAA
GAAAGAAAGAGAGTGAGTGAGAGAAAGAGAGATCAAAAGGAGAGAGAGCT
GAAACAACACAACAGATAACAATGGCTTCGCTGACGATGCCGCGCCCTTC
ACAATCCACGTCAGCTTCTTGCTCTTCGCCTATCCCCAGTCGCTGTTCTT
TCGGTGACCAAAACCCAACTTTTTCATTCAGTTTCAGGGACTCTCGCTCT
CGGGTTCACGTCTGTAATGCCGCCGCCGTTAGATGTGACATGGCTGAGGC
ATTGAATTTTCCAAATGGGAAGCCTAATATTCCAGTTCTAAACGAACGGA
CGCTGCCCAAATTTTTGGAAACGGCGCGTATGGAGAAAACTGTCAACAGA
ACTACAAATAACAGGATCAAATTGTTCTCTGGCACCGCCAATCCTGCTCT
TTCCCAGGAAATTGCTTGCTACATGGGCGTGGAACTGGGAAAGATCAACA
TAAAGCGATTTGCTGATGGTGAAATTTATGTTCAGCTGCAAGAGAGTGTT
AGAGGATGTGATGTTTATTTGGTGCAGCCCACCTGTCCTCCCGGCAATGA
AAATCTCATGGAGCTTTTGATAAT
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