FC930796

Overview
NameFC930796
Unique NameFC930796
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length674
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930796 vs. ExPASy Swiss-Prot
Match: KPRS_RHOBA (Ribose-phosphate pyrophosphokinase OS=Rhodopirellula baltica GN=prs PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 4.894e-13
Identity = 34/68 (50.00%), Postives = 51/68 (75.00%), Query Frame = 1
Query:  466 IKLFSGTANPALSQEIACYMGVELGKINIKRFADGEIYVQLQESVRGCDVYLVQPTCPPGNENLMELL 669
            +K+FSG AN  L++++  ++ ++  +I + +F DGE Y +L E VRG DV+LVQPTCPP N+NL+ELL
Sbjct:    4 LKIFSGRANHDLAEKLCRHLHLKPARITLGQFPDGENYCKLDEDVRGRDVFLVQPTCPPVNDNLIELL 71          
BLAST of FC930796 vs. ExPASy Swiss-Prot
Match: KPRS_PHOLL (Ribose-phosphate pyrophosphokinase OS=Photorhabdus luminescens subsp. laumondii GN=prs PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 6.391e-13
Identity = 33/69 (47.83%), Postives = 50/69 (72.46%), Query Frame = 1
Query:  466 IKLFSGTANPALSQEIACYMGVELGKINIKRFADGEIYVQLQESVRGCDVYLVQPTCPPGNENLMELLI 672
            +KLF+G A P L+Q +A  +   LG   + RF+DGE+ VQ+ E+VRG D++++Q TC P N+NLMEL++
Sbjct:    4 MKLFAGNAIPELAQRVANRLYTNLGDAAVGRFSDGEVSVQVNENVRGGDIFIIQSTCAPTNDNLMELVV 72          
BLAST of FC930796 vs. ExPASy Swiss-Prot
Match: KPRS_MARMS (Ribose-phosphate pyrophosphokinase OS=Marinomonas sp. (strain MWYL1) GN=prs PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 6.391e-13
Identity = 29/71 (40.85%), Postives = 52/71 (73.24%), Query Frame = 1
Query:  460 NRIKLFSGTANPALSQEIACYMGVELGKINIKRFADGEIYVQLQESVRGCDVYLVQPTCPPGNENLMELLI 672
            +++ +F+G ANP L++ +   +G+ +G   + +F+D EI V++ E+VRG DV+++Q TC P N+NLMEL++
Sbjct:    2 SKLMVFTGNANPELARRVVRRLGLPIGNATVGKFSDSEITVEINENVRGKDVFIIQSTCAPSNDNLMELIV 72          
BLAST of FC930796 vs. ExPASy Swiss-Prot
Match: KPRS_CLOTE (Ribose-phosphate pyrophosphokinase OS=Clostridium tetani GN=prs PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 6.391e-13
Identity = 34/69 (49.28%), Postives = 50/69 (72.46%), Query Frame = 1
Query:  466 IKLFSGTANPALSQEIACYMGVELGKINIKRFADGEIYVQLQESVRGCDVYLVQPTCPPGNENLMELLI 672
            +K+F+G +N  L+++IA  +GV LG   + RF+DGEI V + E+VRG D +++Q T  P N+NLMELLI
Sbjct:   10 LKIFAGNSNDKLAKDIADIVGVPLGSAEVGRFSDGEITVNINETVRGIDAFIIQSTSAPVNDNLMELLI 78          
BLAST of FC930796 vs. ExPASy Swiss-Prot
Match: KPRS2_STRP6 (Ribose-phosphate pyrophosphokinase 2 OS=Streptococcus pyogenes serotype M6 GN=prs2 PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 6.391e-13
Identity = 35/75 (46.67%), Postives = 56/75 (74.67%), Query Frame = 1
Query:  448 RTTNNRIKLFSGTANPALSQEIACYMGVELGKINIKRFADGEIYVQLQESVRGCDVYLVQPTCPPGNENLMELLI 672
            R  + +IKLFS T+N  ++++IA   G+ LGK++ ++F+DGEI + ++E+VRG D+Y++Q T  P N+NL ELLI
Sbjct:    4 RYADKQIKLFSLTSNLPIAEKIAKAAGIPLGKMSSRQFSDGEIMINIEETVRGDDIYIIQSTSFPVNDNLWELLI 78          
BLAST of FC930796 vs. ExPASy Swiss-Prot
Match: KPRS2_STRP3 (Ribose-phosphate pyrophosphokinase 2 OS=Streptococcus pyogenes serotype M3 GN=prs2 PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 6.391e-13
Identity = 35/75 (46.67%), Postives = 56/75 (74.67%), Query Frame = 1
Query:  448 RTTNNRIKLFSGTANPALSQEIACYMGVELGKINIKRFADGEIYVQLQESVRGCDVYLVQPTCPPGNENLMELLI 672
            R  + +IKLFS T+N  ++++IA   G+ LGK++ ++F+DGEI + ++E+VRG D+Y++Q T  P N+NL ELLI
Sbjct:    4 RYADKQIKLFSLTSNLPIAEKIAKAAGIPLGKMSSRQFSDGEIMINIEETVRGDDIYIIQSTSFPVNDNLWELLI 78          
BLAST of FC930796 vs. ExPASy Swiss-Prot
Match: PRPS1_RAT (Ribose-phosphate pyrophosphokinase 1 OS=Rattus norvegicus GN=Prps1 PE=1 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 8.347e-13
Identity = 38/69 (55.07%), Postives = 53/69 (76.81%), Query Frame = 1
Query:  466 IKLFSGTANPALSQEIACYMGVELGKINIKRFADGEIYVQLQESVRGCDVYLVQPTCPPGNENLMELLI 672
            IK+FSG+++  LSQ+IA  +G+ELGK+  K+F++ E  V++ ESVRG DVY+VQ  C   N+NLMELLI
Sbjct:    4 IKIFSGSSHQDLSQKIADRLGLELGKVVTKKFSNQETCVEIGESVRGEDVYIVQSGCGEINDNLMELLI 72          
BLAST of FC930796 vs. ExPASy Swiss-Prot
Match: PRPS1_PONAB (Ribose-phosphate pyrophosphokinase 1 OS=Pongo abelii GN=PRPS1 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 8.347e-13
Identity = 38/69 (55.07%), Postives = 53/69 (76.81%), Query Frame = 1
Query:  466 IKLFSGTANPALSQEIACYMGVELGKINIKRFADGEIYVQLQESVRGCDVYLVQPTCPPGNENLMELLI 672
            IK+FSG+++  LSQ+IA  +G+ELGK+  K+F++ E  V++ ESVRG DVY+VQ  C   N+NLMELLI
Sbjct:    4 IKIFSGSSHQDLSQKIADRLGLELGKVVTKKFSNQETCVEIGESVRGEDVYIVQSGCGEINDNLMELLI 72          
BLAST of FC930796 vs. ExPASy Swiss-Prot
Match: PRPS1_MOUSE (Ribose-phosphate pyrophosphokinase 1 OS=Mus musculus GN=Prps1 PE=1 SV=3)

HSP 1 Score: 73.9442 bits (180), Expect = 8.347e-13
Identity = 38/69 (55.07%), Postives = 53/69 (76.81%), Query Frame = 1
Query:  466 IKLFSGTANPALSQEIACYMGVELGKINIKRFADGEIYVQLQESVRGCDVYLVQPTCPPGNENLMELLI 672
            IK+FSG+++  LSQ+IA  +G+ELGK+  K+F++ E  V++ ESVRG DVY+VQ  C   N+NLMELLI
Sbjct:    4 IKIFSGSSHQDLSQKIADRLGLELGKVVTKKFSNQETCVEIGESVRGEDVYIVQSGCGEINDNLMELLI 72          
BLAST of FC930796 vs. ExPASy Swiss-Prot
Match: PRPS1_MACFA (Ribose-phosphate pyrophosphokinase 1 OS=Macaca fascicularis GN=PRPS1 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 8.347e-13
Identity = 38/69 (55.07%), Postives = 53/69 (76.81%), Query Frame = 1
Query:  466 IKLFSGTANPALSQEIACYMGVELGKINIKRFADGEIYVQLQESVRGCDVYLVQPTCPPGNENLMELLI 672
            IK+FSG+++  LSQ+IA  +G+ELGK+  K+F++ E  V++ ESVRG DVY+VQ  C   N+NLMELLI
Sbjct:    4 IKIFSGSSHQDLSQKIADRLGLELGKVVTKKFSNQETCVEIGESVRGEDVYIVQSGCGEINDNLMELLI 72          
The following BLAST results are available for this feature:
BLAST of FC930796 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 144
Match NameE-valueIdentityDescription
KPRS_RHOBA4.894e-1350.00Ribose-phosphate pyrophosphokinase OS=Rhodopirellu... [more]
KPRS_PHOLL6.391e-1347.83Ribose-phosphate pyrophosphokinase OS=Photorhabdus... [more]
KPRS_MARMS6.391e-1340.85Ribose-phosphate pyrophosphokinase OS=Marinomonas ... [more]
KPRS_CLOTE6.391e-1349.28Ribose-phosphate pyrophosphokinase OS=Clostridium ... [more]
KPRS2_STRP66.391e-1346.67Ribose-phosphate pyrophosphokinase 2 OS=Streptococ... [more]
KPRS2_STRP36.391e-1346.67Ribose-phosphate pyrophosphokinase 2 OS=Streptococ... [more]
PRPS1_RAT8.347e-1355.07Ribose-phosphate pyrophosphokinase 1 OS=Rattus nor... [more]
PRPS1_PONAB8.347e-1355.07Ribose-phosphate pyrophosphokinase 1 OS=Pongo abel... [more]
PRPS1_MOUSE8.347e-1355.07Ribose-phosphate pyrophosphokinase 1 OS=Mus muscul... [more]
PRPS1_MACFA8.347e-1355.07Ribose-phosphate pyrophosphokinase 1 OS=Macaca fas... [more]

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Properties
Property NameValue
Genbank descriptionC34109B05EF PostHarvP1 Citrus clementina cDNA clone C34109B05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930796 ID=FC930796; Name=FC930796; organism=Citrus clementina; type=EST; length=674bp
GATGAAAATCCAAAGCGACGAAGCAAAATAGCCAAAGAAGAAGAAAAAGC
AACCGAAGCTCTCTCTGCCTCCTCACCGTCACCACAAAAACAAAAGGAAA
GAAAGAAAGAGAGTGAGTGAGAGAAAGAGAGATCAAAAGGAGAGAGAGCT
GAAACAACACAACAGATAACAATGGCTTCGCTGACGATGCCGCGCCCTTC
ACAATCCACGTCAGCTTCTTGCTCTTCGCCTATCCCCAGTCGCTGTTCTT
TCGGTGACCAAAACCCAACTTTTTCATTCAGTTTCAGGGACTCTCGCTCT
CGGGTTCACGTCTGTAATGCCGCCGCCGTTAGATGTGACATGGCTGAGGC
ATTGAATTTTCCAAATGGGAAGCCTAATATTCCAGTTCTAAACGAACGGA
CGCTGCCCAAATTTTTGGAAACGGCGCGTATGGAGAAAACTGTCAACAGA
ACTACAAATAACAGGATCAAATTGTTCTCTGGCACCGCCAATCCTGCTCT
TTCCCAGGAAATTGCTTGCTACATGGGCGTGGAACTGGGAAAGATCAACA
TAAAGCGATTTGCTGATGGTGAAATTTATGTTCAGCTGCAAGAGAGTGTT
AGAGGATGTGATGTTTATTTGGTGCAGCCCACCTGTCCTCCCGGCAATGA
AAATCTCATGGAGCTTTTGATAAT
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