FC930799
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930799 vs. ExPASy Swiss-Prot
Match: CSN3_XENLA (COP9 signalosome complex subunit 3 OS=Xenopus laevis GN=cops3 PE=2 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 5.003e-33 Identity = 85/237 (35.86%), Postives = 128/237 (54.01%), Query Frame = 1 Query: 1 TALKDYLKAGEDLLRSESTRLLSFLDQLDPSKHSLGYLYFLEPCMYCSITKERANTLVPIIARFITSCSAEQIRYVPEKFINVCKRYKDQVLLLEAPIRGVGPMLTAIRKIQSSTEHLTTLHPEFLQLCLLAKCYKAGLSVLEDDIYEINL------PRDFFLYCYYGGMIFIGQKRFRKALELLHNVVTAPMSSINAIAVEAYKKYILVSLIHHGQFSSTLPKYTSSAAQRNLKNL 693 T L + + +LL + L + L LD +HSLG L L + + TL + FI++C+ E IRY + F +C + + ++ + P+RG+ + AI K+Q + LT++H + QL LLAKC+K L+ L+ D+ +I + F Y YYGGMI+ G K F +A+ +T P +++ I +EAYKKYILVSLI HG+ LPKYTS R +K L Sbjct: 22 TQLCELINKSGELLAKNLSHLDTVLGALDVQEHSLGVLAVLF-VKFSMPSIPDFETLFSQVQLFISTCNGEHIRYATDTFAGLCHQLTNALVERKQPLRGICVIRQAIDKMQMNANQLTSIHGDLCQLSLLAKCFKPALAYLDVDMMDICKENGAYDAKPFLCYYYYGGMIYTGLKNFERAMYFYEQAITTPAMAVSHIMLEAYKKYILVSLILHGKVQQ-LPKYTSQVVGRFIKPL 256
BLAST of FC930799 vs. ExPASy Swiss-Prot
Match: CSN3_DICDI (COP9 signalosome complex subunit 3 OS=Dictyostelium discoideum GN=csn3 PE=1 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 1.901e-32 Identity = 87/236 (36.86%), Postives = 128/236 (54.24%), Query Frame = 1 Query: 7 LKDYLKAGEDLLRSESTRLLSFLDQLDPSKHSLGYLYFLEPCMYCSITKERANTLVPIIARFITSCSAEQIRYVPEKFINVCKRYKDQVLLLEAPIRGVGPMLTAIRKIQSS--TEHLTTLHPEFLQLCLLAKCYKAGLSVLEDDIYEINLP------RDFFLYCYYGGMIFIGQKRFRKALELLHNVVTAPMSSINAIAVEAYKKYILVSLIHHGQFSSTLPKYTSSAAQRNLKN 690 LK+ LK E L R + L + L LD HSLG L L+ S + + + F +C+ EQ+R P + + K Y + + L+ PIRGV + A+ + + T LT +H +FLQLC+L+KCY L ++E +I IN +D Y YY G+IF K+++KA+E V+TAP S+++AI VEAYKKY++V LI G PK T + QRN+K+ Sbjct: 16 LKNLLKYEEQLER-QHVSLDNILGALDVRNHSLGQLLVLKA--KGSDQGKNRSVFIDQCNNFFRNCNVEQVRLAPAQLSQLSKFYTEALYELKQPIRGVAVLKDALNILSDNKPTTTLTPIHTDFLQLCILSKCYHQALPLIESNITHINPEQSSIAIKDILCYFYYSGIIFTAFKKYKKAIEAFKFVITAPASALSAITVEAYKKYLIVYLIQFGSVQH-FPKCTPAVVQRNIKS 247
BLAST of FC930799 vs. ExPASy Swiss-Prot
Match: CSN3_DROME (COP9 signalosome complex subunit 3 OS=Drosophila melanogaster GN=CSN3 PE=1 SV=2) HSP 1 Score: 95.1301 bits (235), Expect = 4.112e-19 Identity = 71/240 (29.58%), Postives = 112/240 (46.67%), Query Frame = 1 Query: 7 LKDYLKAGEDLLRSESTRLLSFLDQLDPSKHSLGYLYFLEPCMYCSITKERANT-LVPIIARFITSCSAEQIRYVPEKFINVCKRYKDQVLLLEAPIRGVGPMLTAIRKIQSSTEHLTTLHPEFLQLCLLAKCYKAGLSVLEDDIYEI---------------------NLPRDFFLYCYYGGMIFIGQKRFRKALELLHNVVTAPMSSINAIAVEAYKKYILVSLIHHGQFSSTLPKYT 660 L + L LL + L + L+ LD +HSLG LY L ++ + T L+ ++ F+ + EQ+RY F C + + V+ I G+ + AI +I+ LT +H + L L AK + L L+ DI +I N + F LY YYGGMI+ K + +AL +T P +++ I +EAYKK+++VSLI G+ + +PK T Sbjct: 24 LAEELPESLSLLARNWSILDNVLETLDMQQHSLGVLYVLLAKLHSASTANPEPVQLIQLMRDFVQRNNNEQLRYAVCAFYETCHLFTEFVVQKNLSILGIRIISRAIDQIRQLETQLTPIHADLCLLSLKAKNFSVVLPYLDADITDISTVAAECKTQQQQQSQHADANNDAKYFLLYFYYGGMIYTAVKNYERALYFFEVCITTPAMAMSHIMLEAYKKFLMVSLIVEGKI-AYIPKNT 262 The following BLAST results are available for this feature:
BLAST of FC930799 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 13
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930799 ID=FC930799; Name=FC930799; organism=Citrus clementina; type=EST; length=736bpback to top |