FC930800

Overview
NameFC930800
Unique NameFC930800
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length695
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930800 vs. ExPASy Swiss-Prot
Match: MPCP_YEAST (Mitochondrial phosphate carrier protein OS=Saccharomyces cerevisiae GN=MIR1 PE=1 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 2.246e-32
Identity = 76/215 (35.35%), Postives = 115/215 (53.49%), Query Frame = 2
Query:   53 VVAAPSEPGKIEMYSPAFYAACTVGGILSCGLTHTAVTPLDLVKCNMQIDPVKY-KSISSGFGVLLKEQGIRGFFRGWVPTLLGYSAQGACXXXXXXXXXXXXSDIAGPEYAAKYKTLIYLAGSASAEFIADVALCPFEAVKVRVQTQPGFARGLGDGLPKFVKSEGALGLYKGIVPLWGRQIPYTMMKVASFETLLR*STSMQFPHQGPVQQTS 694
            V AAP+ P     YS + Y    + G + CG TH+++ P+D+VK  +Q++P  Y K +   F  ++  +G      G+ PTLLGYS QGA              D  G + A++YK  +Y+  +A AEF+AD+ALCP EA ++R+ +QP FA GL  G  + +K EG    Y G  P+  +QIPY + K   FE     ++   +   GP ++ S
Sbjct:    3 VSAAPAIP----QYSVSDYMKFALAGAIGCGSTHSSMVPIDVVKTRIQLEPTVYNKGMVGSFKQIIAGEGAGALLTGFGPTLLGYSIQGAFKFGGYEVFKKFFIDNLGYDTASRYKNSVYMGSAAMAEFLADIALCPLEATRIRLVSQPQFANGLVGGFSRILKEEGIGSFYSGFTPILFKQIPYNIAKFLVFER----ASEFYYGFAGPKEKLS 209          
BLAST of FC930800 vs. ExPASy Swiss-Prot
Match: UCPB_DICDI (Mitochondrial substrate carrier family protein ucpB OS=Dictyostelium discoideum GN=ucpB PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.159e-12
Identity = 57/184 (30.98%), Postives = 83/184 (45.11%), Query Frame = 2
Query:  128 GILSCGLTHTAVTPLDLVKCNMQIDP--VKYKSISSGFGVLLKEQGIRGFFRGWVPT-----LLGYSAQGACXXXXXXXXXXXXSDIAGPEYAAKYKTLIYLAGSASAEFIADVALCPFEAVKVRVQTQPGFARGLG-------DGLPKFVKSEGALGLYKGIVPLWGRQIPYTMMKVASFETL 637
            G LS  L     +P DL+K  MQ     VKY SISS F  ++ ++GI+G ++G  PT     LL  S   +               + G +        +++  S  A  IA +   P + VK R+  QP  + G+G       D   K  +SEG  GLYKG +P W R  P+T++    +E L
Sbjct:  110 GALSGALGACITSPTDLIKVRMQASSKGVKYDSISSAFKEIIAKEGIKGLWKGVGPTTQRAALLTASQIPSYDHIKHMILDHGIIQVDGLQ--------VHIVSSIFAGLIASITTSPVDLVKTRIMNQPFDSNGVGLIYKSSYDCFKKTFQSEGISGLYKGFLPNWFRIGPHTIVTFILYEYL 285          
The following BLAST results are available for this feature:
BLAST of FC930800 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
MPCP_YEAST2.246e-3235.35Mitochondrial phosphate carrier protein OS=Sacchar... [more]
UCPB_DICDI1.159e-1230.98Mitochondrial substrate carrier family protein ucp... [more]

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Properties
Property NameValue
Genbank descriptionC34109B09EF PostHarvP1 Citrus clementina cDNA clone C34109B09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930800 ID=FC930800; Name=FC930800; organism=Citrus clementina; type=EST; length=695bp
GGCAGCAGCCGCCACGTCGCCGGCTACTCCATCCACGGCGAGGAGGAGCT
TCGTTGTTGCGGCACCGAGCGAGCCAGGGAAGATAGAGATGTACTCCCCT
GCATTCTACGCCGCTTGTACCGTCGGCGGGATCCTCAGCTGCGGTCTCAC
TCACACGGCCGTCACTCCTCTTGACCTCGTCAAGTGCAATATGCAGATTG
ATCCTGTTAAGTATAAAAGCATATCATCTGGTTTTGGAGTTTTGCTCAAG
GAACAGGGAATCAGGGGCTTCTTCAGGGGATGGGTACCTACCTTGCTTGG
TTACAGCGCCCAAGGTGCTTGCAAGTTTGGATTCTACGAGTTCTTCAAGA
AGTACTACTCTGACATTGCTGGTCCAGAGTATGCTGCTAAGTACAAGACT
TTAATCTACCTTGCTGGCTCTGCTTCTGCTGAGTTCATTGCTGATGTTGC
TCTTTGCCCCTTTGAGGCCGTGAAGGTCCGTGTTCAGACTCAGCCTGGTT
TTGCCAGAGGTTTGGGTGATGGACTTCCCAAGTTTGTTAAATCTGAGGGC
GCTCTTGGTTTGTACAAGGGTATTGTTCCTCTTTGGGGGCGTCAGATTCC
ATATACTATGATGAAAGTTGCGTCTTTTGAAACATTGTTGAGATGATCTA
CAAGCATGCAGTTCCCACACCAAGGACCAGTGCAGCAAACCTCTG
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