FC930801

Overview
NameFC930801
Unique NameFC930801
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length684
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930801 vs. ExPASy Swiss-Prot
Match: EF1G_PIG (Elongation factor 1-gamma (Fragment) OS=Sus scrofa GN=EEF1G PE=2 SV=2)

HSP 1 Score: 127.872 bits (320), Expect = 5.047e-29
Identity = 75/189 (39.68%), Postives = 100/189 (52.91%), Query Frame = 1
Query:  130 NKNAFKALITAEYTGVNVELVK---NFEMGVTNKTPEFLKMNPIGKVPVLETPDG-PIFESNAIARYVARLKAVNPLLGSSLIDSAHIEQWIDFSSLEIDTNILRWFIPRVGFAVYLPQAEEXXXXXXXXXXXXXNTHLASNTYLVGHSVTLADIIMTCNLTLGFSRILTKSFTSEFPHVERYFWTMVN 684
            N  AFKALI A+Y+G  V ++    +F  G TN TPEFL+  P GKVP  E  DG  +FESNAIA YV+       L GS+   +A + QW+ F+  +I      W  P +G   Y  QA E             + HL + T+LVG  VTLADI + C L   + ++L  SF   FP+  R+F T +N
Sbjct:    7 NWRAFKALIAAQYSGAQVRVLSAPPHFHFGQTNHTPEFLRKFPAGKVPAFEGDDGFCVFESNAIAYYVSN----EELRGSTPEAAAQVVQWVSFADSDIVPPASTWVFPTLGIMHYNKQATENAKDEVRRVLGLLDAHLKTRTFLVGERVTLADITVVCTLLWLYKQVLEPSFRQAFPNTNRWFLTCIN 191          
BLAST of FC930801 vs. ExPASy Swiss-Prot
Match: EF1G_RABIT (Elongation factor 1-gamma OS=Oryctolagus cuniculus GN=EEF1G PE=2 SV=3)

HSP 1 Score: 127.487 bits (319), Expect = 6.591e-29
Identity = 76/198 (38.38%), Postives = 104/198 (52.53%), Query Frame = 1
Query:  103 AMVLHAGNTNKNAFKALITAEYTGVNVELVK---NFEMGVTNKTPEFLKMNPIGKVPVLETPDG-PIFESNAIARYVARLKAVNPLLGSSLIDSAHIEQWIDFSSLEIDTNILRWFIPRVGFAVYLPQAEEXXXXXXXXXXXXXNTHLASNTYLVGHSVTLADIIMTCNLTLGFSRILTKSFTSEFPHVERYFWTMVN 684
            A  L+    N  AFKALI A+Y+G  V ++    +F  G TN+TPEFL+  P GKVP  E  DG  +FESNAIA YV+       L GS+   +A + QW+ F+  +I      W  P +G   +  QA E             + HL + T+LVG  VTLADI + C L   + ++L  SF   FP+  R+F T +N
Sbjct:    3 AGTLYTYPENWRAFKALIAAQYSGAQVRVLSAPPHFHFGQTNRTPEFLRKFPAGKVPAFEGDDGFCVFESNAIAYYVSN----EELRGSTPEAAAQVVQWVSFADSDIVPPASTWVFPTLGIMHHNKQATENAKEEVKRILGLLDAHLKTRTFLVGERVTLADITVVCTLLWLYKQVLEPSFRQAFPNTNRWFLTCIN 196          
BLAST of FC930801 vs. ExPASy Swiss-Prot
Match: EF1G_MACFA (Elongation factor 1-gamma OS=Macaca fascicularis GN=EEF1G PE=2 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 6.591e-29
Identity = 76/198 (38.38%), Postives = 104/198 (52.53%), Query Frame = 1
Query:  103 AMVLHAGNTNKNAFKALITAEYTGVNVELVK---NFEMGVTNKTPEFLKMNPIGKVPVLETPDG-PIFESNAIARYVARLKAVNPLLGSSLIDSAHIEQWIDFSSLEIDTNILRWFIPRVGFAVYLPQAEEXXXXXXXXXXXXXNTHLASNTYLVGHSVTLADIIMTCNLTLGFSRILTKSFTSEFPHVERYFWTMVN 684
            A  L+    N  AFKALI A+Y+G  V ++    +F  G TN+TPEFL+  P GKVP  E  DG  +FESNAIA YV+       L GS+   +A + QW+ F+  +I      W  P +G   +  QA E             + HL + T+LVG  VTLADI + C L   + ++L  SF   FP+  R+F T +N
Sbjct:    3 AGTLYTYPENWRAFKALIAAQYSGAQVRVLSAPPHFHFGQTNRTPEFLRKFPAGKVPAFEGDDGFCVFESNAIAYYVSN----EELRGSTPEAAAQVVQWVSFADSDIVPPASTWVFPTLGIMHHNKQATENAKEEVRRILGLLDAHLKTRTFLVGERVTLADITVVCTLLWLYKQVLEPSFRQAFPNTNRWFLTCIN 196          
BLAST of FC930801 vs. ExPASy Swiss-Prot
Match: EF1G_HORSE (Elongation factor 1-gamma OS=Equus caballus GN=EEF1G PE=2 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 6.591e-29
Identity = 76/198 (38.38%), Postives = 104/198 (52.53%), Query Frame = 1
Query:  103 AMVLHAGNTNKNAFKALITAEYTGVNVELVK---NFEMGVTNKTPEFLKMNPIGKVPVLETPDG-PIFESNAIARYVARLKAVNPLLGSSLIDSAHIEQWIDFSSLEIDTNILRWFIPRVGFAVYLPQAEEXXXXXXXXXXXXXNTHLASNTYLVGHSVTLADIIMTCNLTLGFSRILTKSFTSEFPHVERYFWTMVN 684
            A  L+    N  AFKALI A+Y+G  V ++    +F  G TN+TPEFL+  P GKVP  E  DG  +FESNAIA YV+       L GS+   +A + QW+ F+  +I      W  P +G   +  QA E             + HL + T+LVG  VTLADI + C L   + ++L  SF   FP+  R+F T +N
Sbjct:    3 AGTLYTYPENWRAFKALIAAQYSGAQVRVLSAPPHFHFGQTNRTPEFLRKFPAGKVPAFEGDDGFCVFESNAIAYYVSN----EELRGSTPEAAAQVVQWVSFADSDIVPPASTWVFPTLGIMHHNKQATENAKEEVRRILGLLDAHLKTRTFLVGERVTLADITVVCTLLWLYKQVLEPSFRQAFPNTNRWFLTCIN 196          
BLAST of FC930801 vs. ExPASy Swiss-Prot
Match: EF1G_BOVIN (Elongation factor 1-gamma OS=Bos taurus GN=EEF1G PE=2 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 6.591e-29
Identity = 76/198 (38.38%), Postives = 104/198 (52.53%), Query Frame = 1
Query:  103 AMVLHAGNTNKNAFKALITAEYTGVNVELVK---NFEMGVTNKTPEFLKMNPIGKVPVLETPDG-PIFESNAIARYVARLKAVNPLLGSSLIDSAHIEQWIDFSSLEIDTNILRWFIPRVGFAVYLPQAEEXXXXXXXXXXXXXNTHLASNTYLVGHSVTLADIIMTCNLTLGFSRILTKSFTSEFPHVERYFWTMVN 684
            A  L+    N  AFKALI A+Y+G  V ++    +F  G TN+TPEFL+  P GKVP  E  DG  +FESNAIA YV+       L GS+   +A + QW+ F+  +I      W  P +G   +  QA E             + HL + T+LVG  VTLADI + C L   + ++L  SF   FP+  R+F T +N
Sbjct:    3 AGTLYTYPENWRAFKALIAAQYSGAQVRVLSAPPHFHFGQTNRTPEFLRKFPAGKVPAFEGDDGFCVFESNAIAYYVSN----EELRGSTPEAAAQVVQWVSFADSDIVPPASTWVFPTLGIMHHNKQATENAKEEVRRILGLLDAHLKTRTFLVGERVTLADITVVCTLLWLYKQVLEPSFRQAFPNTNRWFLTCIN 196          
BLAST of FC930801 vs. ExPASy Swiss-Prot
Match: EF1G_HUMAN (Elongation factor 1-gamma OS=Homo sapiens GN=EEF1G PE=1 SV=3)

HSP 1 Score: 125.176 bits (313), Expect = 3.271e-28
Identity = 75/198 (37.88%), Postives = 104/198 (52.53%), Query Frame = 1
Query:  103 AMVLHAGNTNKNAFKALITAEYTGVNVELVK---NFEMGVTNKTPEFLKMNPIGKVPVLETPDG-PIFESNAIARYVARLKAVNPLLGSSLIDSAHIEQWIDFSSLEIDTNILRWFIPRVGFAVYLPQAEEXXXXXXXXXXXXXNTHLASNTYLVGHSVTLADIIMTCNLTLGFSRILTKSFTSEFPHVERYFWTMVN 684
            A  L+    N  AFKALI A+Y+G  V ++    +F  G TN+TPEFL+  P GKVP  E  DG  +FESNAIA YV+       L GS+   +A + QW+ F+  +I      W  P +G   +  QA E             + +L + T+LVG  VTLADI + C L   + ++L  SF   FP+  R+F T +N
Sbjct:    3 AGTLYTYPENWRAFKALIAAQYSGAQVRVLSAPPHFHFGQTNRTPEFLRKFPAGKVPAFEGDDGFCVFESNAIAYYVSN----EELRGSTPEAAAQVVQWVSFADSDIVPPASTWVFPTLGIMHHNKQATENAKEEVRRILGLLDAYLKTRTFLVGERVTLADITVVCTLLWLYKQVLEPSFRQAFPNTNRWFLTCIN 196          
BLAST of FC930801 vs. ExPASy Swiss-Prot
Match: EF1GB_XENLA (Elongation factor 1-gamma-B OS=Xenopus laevis GN=eef1g-B PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 3.062e-26
Identity = 71/190 (37.37%), Postives = 104/190 (54.74%), Query Frame = 1
Query:  130 NKNAFKALITAEYTGVNVELVKN---FEMGVTNKTPEFLKMNPIGKVPVLETPDG-PIFESNAIARYVARLKAVNPLLGSS-LIDSAHIEQWIDFSSLEIDTNILRWFIPRVGFAVYLPQAEEXXXXXXXXXXXXXNTHLASNTYLVGHSVTLADIIMTCNLTLGFSRILTKSFTSEFPHVERYFWTMVN 684
            N  A+K LI A+Y+   +++  +   F+ G+TNKTPEFLK  P+GKVP  E  +G  +FES+AIA YVA     + L GS+  +  A + QW+ FS   +      W  P +G   +  QA E             + HL + T+LVG  +TLADI +TC+L   + ++L  SF   + +V R+F T VN
Sbjct:   12 NWRAYKPLIAAQYSRFPIKVASSPPEFQFGLTNKTPEFLKKFPLGKVPAFEGNNGFCLFESSAIAHYVAN----DELRGSNNRLHQAQVIQWVGFSDSHVVPPASAWVFPTLGIMQFNKQATEQAKEEIKTVLGVLDCHLQTRTFLVGERITLADITLTCSLLWLYKQVLEPSFRQPYGNVTRWFVTCVN 197          
BLAST of FC930801 vs. ExPASy Swiss-Prot
Match: EF1G_CARAU (Elongation factor 1-gamma OS=Carassius auratus GN=eef1g PE=2 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 6.821e-26
Identity = 71/198 (35.86%), Postives = 104/198 (52.53%), Query Frame = 1
Query:  103 AMVLHAGNTNKNAFKALITAEYTGVNVELVKN---FEMGVTNKTPEFLKMNPIGKVPVLETPDG-PIFESNAIARYVARLKAVNPLLGSSLIDSAHIEQWIDFSSLEIDTNILRWFIPRVGFAVYLPQAEEXXXXXXXXXXXXXNTHLASNTYLVGHSVTLADIIMTCNLTLGFSRILTKSFTSEFPHVERYFWTMVN 684
            A  L+    N  AFKA I A+Y+G  +++      F  G TN++P FL   P+GKVP  +  DG  +FESNAIA +++     + L GS+   SA + QW+ F+  EI      W  P +G   +  QA E             N HL + T+LVG  V+LADI + C+L   + ++L  +F   +P+V R+F T VN
Sbjct:    3 AGTLYTYPENWRAFKAQIAAQYSGARLKIASASPAFTFGQTNRSPAFLSNFPLGKVPAYQGDDGFCLFESNAIAHFLSN----DALRGSTPQASAQVLQWVSFADSEIIPPASAWVFPTLGIMQFNKQATEQAKEEVKRVLAVLNQHLNTRTFLVGERVSLADITVVCSLLWLYKQVLEPAFRQPYPNVTRWFLTCVN 196          
BLAST of FC930801 vs. ExPASy Swiss-Prot
Match: EF1G_DANRE (Elongation factor 1-gamma OS=Danio rerio GN=eef1g PE=2 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.163e-25
Identity = 70/198 (35.35%), Postives = 104/198 (52.53%), Query Frame = 1
Query:  103 AMVLHAGNTNKNAFKALITAEYTGVNVELVKN---FEMGVTNKTPEFLKMNPIGKVPVLETPDG-PIFESNAIARYVARLKAVNPLLGSSLIDSAHIEQWIDFSSLEIDTNILRWFIPRVGFAVYLPQAEEXXXXXXXXXXXXXNTHLASNTYLVGHSVTLADIIMTCNLTLGFSRILTKSFTSEFPHVERYFWTMVN 684
            A  L+    N  AFKA I A+Y+G  +++      F  G TN++P FL   P+GKVP  +  DG  +FESNAIA Y++     + L GS+   SA + QW+ F+  E+      W  P +G   +  QA E             N HL + T+LVG  ++LADI + C+L   + ++L  +F   +P+V R+F T VN
Sbjct:    3 AGTLYTYPENWRAFKAQIAAQYSGARLKIASAPPAFTFGQTNRSPAFLGNFPLGKVPAYQGDDGFCLFESNAIAHYLSN----DVLRGSTPQASAQVLQWVSFADSEVIPPASAWVFPTLGIMQFNKQATEQAKEEVKRVLAVLNQHLNTRTFLVGERISLADITVVCSLLWLYKQVLEPAFRQPYPNVTRWFVTCVN 196          
BLAST of FC930801 vs. ExPASy Swiss-Prot
Match: EF1G_DROME (Elongation factor 1-gamma OS=Drosophila melanogaster GN=Ef1gamma PE=1 SV=2)

HSP 1 Score: 103.99 bits (258), Expect = 7.804e-22
Identity = 69/187 (36.90%), Postives = 96/187 (51.34%), Query Frame = 1
Query:  130 NKNAFKALITAEYTGVNVELVKNFEMGVTNKTPEFLKMNPIGKVPVLETPDGP-IFESNAIARYVARLKAVNPLLGSSLIDSAHIEQWIDFSSLEIDTNILRWFIPRVGFAVYLPQAE-EXXXXXXXXXXXXXNTHLASNTYLVGHSVTLADIIMTCNLTLGFSRILTKSFTSEFPHVERYFWTMVN 684
            N  A+KALI A+Y+G  V++  NF+ G TNK+ EFLK  P GKVP  ET +G  + ESNAIA  +A  +      G      A ++QWI F+  EI      W  P +G    LPQ +               N  L   T+L G  +TLADI++  +L   +  +L  S  S F +V R+F T++N
Sbjct:   12 NFRAYKALIAAQYSGAQVKVADNFKFGETNKSAEFLKKFPGGKVPAFETAEGQYLSESNAIAYLLANEQLRG---GKCPFVQAQVQQWISFADNEIVPASCAWVFPLLGI---LPQQKNSTAKQEAEAVLQQLNQKLQDATFLAGERITLADIVVFSSLLHLYEYVLEPSVRSAFGNVNRWFVTILN 192          
The following BLAST results are available for this feature:
BLAST of FC930801 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 24
Match NameE-valueIdentityDescription
EF1G_PIG5.047e-2939.68Elongation factor 1-gamma (Fragment) OS=Sus scrofa... [more]
EF1G_RABIT6.591e-2938.38Elongation factor 1-gamma OS=Oryctolagus cuniculus... [more]
EF1G_MACFA6.591e-2938.38Elongation factor 1-gamma OS=Macaca fascicularis G... [more]
EF1G_HORSE6.591e-2938.38Elongation factor 1-gamma OS=Equus caballus GN=EEF... [more]
EF1G_BOVIN6.591e-2938.38Elongation factor 1-gamma OS=Bos taurus GN=EEF1G P... [more]
EF1G_HUMAN3.271e-2837.88Elongation factor 1-gamma OS=Homo sapiens GN=EEF1G... [more]
EF1GB_XENLA3.062e-2637.37Elongation factor 1-gamma-B OS=Xenopus laevis GN=e... [more]
EF1G_CARAU6.821e-2635.86Elongation factor 1-gamma OS=Carassius auratus GN=... [more]
EF1G_DANRE1.163e-2535.35Elongation factor 1-gamma OS=Danio rerio GN=eef1g ... [more]
EF1G_DROME7.804e-2236.90Elongation factor 1-gamma OS=Drosophila melanogast... [more]

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Properties
Property NameValue
Genbank descriptionC34109B10EF PostHarvP1 Citrus clementina cDNA clone C34109B10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930801 ID=FC930801; Name=FC930801; organism=Citrus clementina; type=EST; length=684bp
GACACTCACTAAACCTCGCAAGACCAAGCCGTTGACACAATCGCTCTGAT
TCGCTGTTTGATCTTGGGTTGTTAACTGAAGTAAAATCTTTCTGAAGCAA
TGGCTATGGTCTTGCATGCAGGGAACACCAATAAAAATGCTTTTAAAGCA
CTTATTACTGCAGAGTACACTGGGGTAAATGTTGAATTGGTCAAGAATTT
TGAGATGGGTGTAACAAACAAAACTCCTGAATTTCTTAAGATGAATCCCA
TTGGAAAGGTTCCTGTGTTGGAAACACCTGATGGACCCATCTTCGAGAGT
AATGCCATTGCACGATATGTTGCACGCTTGAAAGCTGTCAACCCACTGTT
GGGCTCGTCTTTAATTGATTCTGCTCATATTGAGCAGTGGATTGATTTCT
CATCATTAGAAATTGACACCAATATTTTGCGTTGGTTTATACCAAGAGTT
GGTTTCGCGGTGTACCTTCCTCAGGCTGAGGAAGCTGCAATTGCTTCTTT
GAAGAGAGCTCTAGCTGCATTGAATACACATCTCGCTTCCAACACTTACT
TAGTTGGCCATTCAGTGACTTTGGCTGATATCATTATGACATGTAACTTG
ACGTTGGGATTCAGTCGGATCCTGACCAAGAGCTTTACATCAGAATTCCC
TCACGTTGAGAGATACTTTTGGACAATGGTTAAC
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