FC930813
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC930813 vs. ExPASy Swiss-Prot
Match: YCF3_EUCGG (Photosystem I assembly protein ycf3 OS=Eucalyptus globulus subsp. globulus GN=ycf3 PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 3.523e-16 Identity = 41/42 (97.62%), Postives = 41/42 (97.62%), Query Frame = 2 Query: 98 MPRSRINGNFIDKTFSIVANILLRIIPTTVGEKEAFTYYRDG 223 MPRSRINGNFIDKTFSIVANILLRIIPTT GEKEAFTYYRDG Sbjct: 1 MPRSRINGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDG 42
BLAST of FC930813 vs. ExPASy Swiss-Prot
Match: YCF3_CHLSC (Photosystem I assembly protein ycf3 OS=Chloranthus spicatus GN=ycf3 PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 3.523e-16 Identity = 41/42 (97.62%), Postives = 41/42 (97.62%), Query Frame = 2 Query: 98 MPRSRINGNFIDKTFSIVANILLRIIPTTVGEKEAFTYYRDG 223 MPRSRINGNFIDKTFSIVANILLRIIPTT GEKEAFTYYRDG Sbjct: 1 MPRSRINGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDG 42
BLAST of FC930813 vs. ExPASy Swiss-Prot
Match: YCF3_TOBAC (Photosystem I assembly protein ycf3 OS=Nicotiana tabacum GN=ycf3 PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 4.601e-16 Identity = 40/42 (95.24%), Postives = 41/42 (97.62%), Query Frame = 2 Query: 98 MPRSRINGNFIDKTFSIVANILLRIIPTTVGEKEAFTYYRDG 223 MPRSRINGNFIDKTFSIVANILLR+IPTT GEKEAFTYYRDG Sbjct: 1 MPRSRINGNFIDKTFSIVANILLRVIPTTSGEKEAFTYYRDG 42
BLAST of FC930813 vs. ExPASy Swiss-Prot
Match: YCF3_NICTO (Photosystem I assembly protein ycf3 OS=Nicotiana tomentosiformis GN=ycf3 PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 4.601e-16 Identity = 40/42 (95.24%), Postives = 41/42 (97.62%), Query Frame = 2 Query: 98 MPRSRINGNFIDKTFSIVANILLRIIPTTVGEKEAFTYYRDG 223 MPRSRINGNFIDKTFSIVANILLR+IPTT GEKEAFTYYRDG Sbjct: 1 MPRSRINGNFIDKTFSIVANILLRVIPTTSGEKEAFTYYRDG 42
BLAST of FC930813 vs. ExPASy Swiss-Prot
Match: YCF3_NICSY (Photosystem I assembly protein ycf3 OS=Nicotiana sylvestris GN=ycf3 PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 4.601e-16 Identity = 40/42 (95.24%), Postives = 41/42 (97.62%), Query Frame = 2 Query: 98 MPRSRINGNFIDKTFSIVANILLRIIPTTVGEKEAFTYYRDG 223 MPRSRINGNFIDKTFSIVANILLR+IPTT GEKEAFTYYRDG Sbjct: 1 MPRSRINGNFIDKTFSIVANILLRVIPTTSGEKEAFTYYRDG 42
BLAST of FC930813 vs. ExPASy Swiss-Prot
Match: YCF3_DAUCA (Photosystem I assembly protein ycf3 OS=Daucus carota GN=ycf3 PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 4.601e-16 Identity = 40/42 (95.24%), Postives = 41/42 (97.62%), Query Frame = 2 Query: 98 MPRSRINGNFIDKTFSIVANILLRIIPTTVGEKEAFTYYRDG 223 MPRSRINGNFIDKTFSI+ANILLRIIPTT GEKEAFTYYRDG Sbjct: 1 MPRSRINGNFIDKTFSIIANILLRIIPTTSGEKEAFTYYRDG 42
BLAST of FC930813 vs. ExPASy Swiss-Prot
Match: YCF3_PELHO (Photosystem I assembly protein ycf3 OS=Pelargonium hortorum GN=ycf3 PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 7.848e-16 Identity = 40/42 (95.24%), Postives = 41/42 (97.62%), Query Frame = 2 Query: 98 MPRSRINGNFIDKTFSIVANILLRIIPTTVGEKEAFTYYRDG 223 MPRSRINGNFIDKTFSIVANILLRIIPTT GE+EAFTYYRDG Sbjct: 1 MPRSRINGNFIDKTFSIVANILLRIIPTTSGEREAFTYYRDG 42
BLAST of FC930813 vs. ExPASy Swiss-Prot
Match: YCF3_PIPCE (Photosystem I assembly protein ycf3 OS=Piper cenocladum GN=ycf3 PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.025e-15 Identity = 40/42 (95.24%), Postives = 41/42 (97.62%), Query Frame = 2 Query: 98 MPRSRINGNFIDKTFSIVANILLRIIPTTVGEKEAFTYYRDG 223 MPRS+INGNFIDKTFSIVANILLRIIPTT GEKEAFTYYRDG Sbjct: 1 MPRSQINGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDG 42
BLAST of FC930813 vs. ExPASy Swiss-Prot
Match: YCF3_ORYSJ (Photosystem I assembly protein ycf3 OS=Oryza sativa subsp. japonica GN=ycf3 PE=2 SV=3) HSP 1 Score: 83.5741 bits (205), Expect = 1.025e-15 Identity = 40/44 (90.91%), Postives = 41/44 (93.18%), Query Frame = 2 Query: 98 MPRSRINGNFIDKTFSIVANILLRIIPTTVGEKEAFTYYRDGAI 229 MPRSRINGNFIDKTFSIVANILLRIIPTT GEK AFTYYRDG + Sbjct: 1 MPRSRINGNFIDKTFSIVANILLRIIPTTSGEKRAFTYYRDGML 44
BLAST of FC930813 vs. ExPASy Swiss-Prot
Match: YCF3_ORYSI (Photosystem I assembly protein ycf3 OS=Oryza sativa subsp. indica GN=ycf3 PE=2 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.025e-15 Identity = 40/44 (90.91%), Postives = 41/44 (93.18%), Query Frame = 2 Query: 98 MPRSRINGNFIDKTFSIVANILLRIIPTTVGEKEAFTYYRDGAI 229 MPRSRINGNFIDKTFSIVANILLRIIPTT GEK AFTYYRDG + Sbjct: 1 MPRSRINGNFIDKTFSIVANILLRIIPTTSGEKRAFTYYRDGML 44 The following BLAST results are available for this feature:
BLAST of FC930813 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 82
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930813 ID=FC930813; Name=FC930813; organism=Citrus clementina; type=EST; length=666bpback to top |