FC930813
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC930813 vs. ExPASy Swiss-Prot
Match: YCF3_SACHY (Photosystem I assembly protein ycf3 OS=Saccharum hybrid GN=ycf3 PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 2.982e-15 Identity = 39/44 (88.64%), Postives = 41/44 (93.18%), Query Frame = 2 Query: 98 MPRSRINGNFIDKTFSIVANILLRIIPTTVGEKEAFTYYRDGAI 229 MPRSRINGNFIDKTFSIVANILL+IIPTT GEK AFTYYRDG + Sbjct: 1 MPRSRINGNFIDKTFSIVANILLQIIPTTSGEKRAFTYYRDGML 44
BLAST of FC930813 vs. ExPASy Swiss-Prot
Match: YCF3_PLAOC (Photosystem I assembly protein ycf3 OS=Platanus occidentalis GN=ycf3 PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 2.982e-15 Identity = 40/42 (95.24%), Postives = 40/42 (95.24%), Query Frame = 2 Query: 98 MPRSRINGNFIDKTFSIVANILLRIIPTTVGEKEAFTYYRDG 223 MPRSRINGNFIDKT SIVANILLRIIPTT GEKEAFTYYRDG Sbjct: 1 MPRSRINGNFIDKTSSIVANILLRIIPTTSGEKEAFTYYRDG 42
BLAST of FC930813 vs. ExPASy Swiss-Prot
Match: YCF3_NYMAL (Photosystem I assembly protein ycf3 OS=Nymphaea alba GN=ycf3 PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 2.982e-15 Identity = 40/42 (95.24%), Postives = 40/42 (95.24%), Query Frame = 2 Query: 98 MPRSRINGNFIDKTFSIVANILLRIIPTTVGEKEAFTYYRDG 223 MPRSRINGNFIDKT SIVANILLRIIPTT GEKEAFTYYRDG Sbjct: 1 MPRSRINGNFIDKTSSIVANILLRIIPTTSGEKEAFTYYRDG 42
BLAST of FC930813 vs. ExPASy Swiss-Prot
Match: YCF3_NUPAD (Photosystem I assembly protein ycf3 OS=Nuphar advena GN=ycf3 PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 2.982e-15 Identity = 40/42 (95.24%), Postives = 40/42 (95.24%), Query Frame = 2 Query: 98 MPRSRINGNFIDKTFSIVANILLRIIPTTVGEKEAFTYYRDG 223 MPRSRINGNFIDKT SIVANILLRIIPTT GEKEAFTYYRDG Sbjct: 1 MPRSRINGNFIDKTSSIVANILLRIIPTTSGEKEAFTYYRDG 42
BLAST of FC930813 vs. ExPASy Swiss-Prot
Match: YCF3_MAIZE (Photosystem I assembly protein ycf3 OS=Zea mays GN=ycf3 PE=2 SV=2) HSP 1 Score: 82.0333 bits (201), Expect = 2.982e-15 Identity = 39/44 (88.64%), Postives = 41/44 (93.18%), Query Frame = 2 Query: 98 MPRSRINGNFIDKTFSIVANILLRIIPTTVGEKEAFTYYRDGAI 229 MPRSRINGNFIDKTFSIVANILL+IIPTT GEK AFTYYRDG + Sbjct: 1 MPRSRINGNFIDKTFSIVANILLQIIPTTSGEKRAFTYYRDGML 44
BLAST of FC930813 vs. ExPASy Swiss-Prot
Match: YCF3_LIRTU (Photosystem I assembly protein ycf3 OS=Liriodendron tulipifera GN=ycf3 PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 2.982e-15 Identity = 40/42 (95.24%), Postives = 40/42 (95.24%), Query Frame = 2 Query: 98 MPRSRINGNFIDKTFSIVANILLRIIPTTVGEKEAFTYYRDG 223 MPRSRINGNFIDKT SIVANILLRIIPTT GEKEAFTYYRDG Sbjct: 1 MPRSRINGNFIDKTSSIVANILLRIIPTTSGEKEAFTYYRDG 42
BLAST of FC930813 vs. ExPASy Swiss-Prot
Match: YCF3_HELAN (Photosystem I assembly protein ycf3 OS=Helianthus annuus GN=ycf3 PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 2.982e-15 Identity = 40/42 (95.24%), Postives = 40/42 (95.24%), Query Frame = 2 Query: 98 MPRSRINGNFIDKTFSIVANILLRIIPTTVGEKEAFTYYRDG 223 M RSRINGNFIDKTFSIVANILLRIIPTT GEKEAFTYYRDG Sbjct: 1 MSRSRINGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDG 42
BLAST of FC930813 vs. ExPASy Swiss-Prot
Match: YCF3_DRIGR (Photosystem I assembly protein ycf3 OS=Drimys granadensis GN=ycf3 PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 2.982e-15 Identity = 40/42 (95.24%), Postives = 40/42 (95.24%), Query Frame = 2 Query: 98 MPRSRINGNFIDKTFSIVANILLRIIPTTVGEKEAFTYYRDG 223 MPRSRINGNFIDKT SIVANILLRIIPTT GEKEAFTYYRDG Sbjct: 1 MPRSRINGNFIDKTSSIVANILLRIIPTTSGEKEAFTYYRDG 42
BLAST of FC930813 vs. ExPASy Swiss-Prot
Match: YCF3_DIOEL (Photosystem I assembly protein ycf3 OS=Dioscorea elephantipes GN=ycf3 PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 2.982e-15 Identity = 40/44 (90.91%), Postives = 42/44 (95.45%), Query Frame = 2 Query: 98 MPRSRINGNFIDKTFSIVANILLRIIPTTVGEKEAFTYYRDGAI 229 MPRS+INGNFIDKT SIVANILLRIIPTT GEK+AFTYYRDGAI Sbjct: 1 MPRSQINGNFIDKTSSIVANILLRIIPTTSGEKKAFTYYRDGAI 44
BLAST of FC930813 vs. ExPASy Swiss-Prot
Match: YCF3_CUSRE (Photosystem I assembly protein ycf3 OS=Cuscuta reflexa GN=ycf3 PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 2.982e-15 Identity = 39/41 (95.12%), Postives = 40/41 (97.56%), Query Frame = 2 Query: 98 MPRSRINGNFIDKTFSIVANILLRIIPTTVGEKEAFTYYRD 220 MPRSRINGNF+DKTFSIVANILLRIIPTT GEKEAFTYYRD Sbjct: 1 MPRSRINGNFLDKTFSIVANILLRIIPTTSGEKEAFTYYRD 41 The following BLAST results are available for this feature:
BLAST of FC930813 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 82
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930813 ID=FC930813; Name=FC930813; organism=Citrus clementina; type=EST; length=666bpback to top |