FC930813
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930813 vs. ExPASy Swiss-Prot
Match: YCF3_WHEAT (Photosystem I assembly protein ycf3 OS=Triticum aestivum GN=ycf3 PE=2 SV=2) HSP 1 Score: 80.4925 bits (197), Expect = 8.677e-15 Identity = 38/44 (86.36%), Postives = 41/44 (93.18%), Query Frame = 2 Query: 98 MPRSRINGNFIDKTFSIVANILLRIIPTTVGEKEAFTYYRDGAI 229 MPRSR+NGNFIDKT SIVANILLRIIPTT GEK+AFTYYRDG + Sbjct: 1 MPRSRVNGNFIDKTSSIVANILLRIIPTTSGEKKAFTYYRDGML 44
BLAST of FC930813 vs. ExPASy Swiss-Prot
Match: YCF3_POPTR (Photosystem I assembly protein ycf3 OS=Populus trichocarpa GN=ycf3 PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 8.677e-15 Identity = 39/42 (92.86%), Postives = 39/42 (92.86%), Query Frame = 2 Query: 98 MPRSRINGNFIDKTFSIVANILLRIIPTTVGEKEAFTYYRDG 223 MPRSRI GN IDKTFSIVANILLRIIPTT GEKEAFTYYRDG Sbjct: 1 MPRSRITGNLIDKTFSIVANILLRIIPTTSGEKEAFTYYRDG 42
BLAST of FC930813 vs. ExPASy Swiss-Prot
Match: YCF3_POPAL (Photosystem I assembly protein ycf3 OS=Populus alba GN=ycf3 PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 8.677e-15 Identity = 39/42 (92.86%), Postives = 39/42 (92.86%), Query Frame = 2 Query: 98 MPRSRINGNFIDKTFSIVANILLRIIPTTVGEKEAFTYYRDG 223 MPRSRI GN IDKTFSIVANILLRIIPTT GEKEAFTYYRDG Sbjct: 1 MPRSRITGNLIDKTFSIVANILLRIIPTTSGEKEAFTYYRDG 42
BLAST of FC930813 vs. ExPASy Swiss-Prot
Match: YCF3_PHAAO (Photosystem I assembly protein ycf3 OS=Phalaenopsis aphrodite subsp. formosana GN=ycf3 PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 8.677e-15 Identity = 39/42 (92.86%), Postives = 40/42 (95.24%), Query Frame = 2 Query: 98 MPRSRINGNFIDKTFSIVANILLRIIPTTVGEKEAFTYYRDG 223 MPRSRINGNFIDKT SIVANILLRIIPTT GEK+AFTYYRDG Sbjct: 1 MPRSRINGNFIDKTSSIVANILLRIIPTTSGEKKAFTYYRDG 42
BLAST of FC930813 vs. ExPASy Swiss-Prot
Match: YCF3_SOYBN (Photosystem I assembly protein ycf3 OS=Glycine max GN=ycf3 PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.133e-14 Identity = 39/42 (92.86%), Postives = 39/42 (92.86%), Query Frame = 2 Query: 98 MPRSRINGNFIDKTFSIVANILLRIIPTTVGEKEAFTYYRDG 223 MPRSRIN NFIDKTFSIVANILLRIIPTT GEK AFTYYRDG Sbjct: 1 MPRSRINENFIDKTFSIVANILLRIIPTTSGEKRAFTYYRDG 42
BLAST of FC930813 vs. ExPASy Swiss-Prot
Match: YCF3_PHAVU (Photosystem I assembly protein ycf3 OS=Phaseolus vulgaris GN=ycf3 PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.133e-14 Identity = 39/42 (92.86%), Postives = 39/42 (92.86%), Query Frame = 2 Query: 98 MPRSRINGNFIDKTFSIVANILLRIIPTTVGEKEAFTYYRDG 223 MPRSRIN NFIDKTFSIVANILLRIIPTT GEK AFTYYRDG Sbjct: 1 MPRSRINENFIDKTFSIVANILLRIIPTTSGEKRAFTYYRDG 42
BLAST of FC930813 vs. ExPASy Swiss-Prot
Match: YCF3_MORIN (Photosystem I assembly protein ycf3 OS=Morus indica GN=ycf3 PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.133e-14 Identity = 39/42 (92.86%), Postives = 39/42 (92.86%), Query Frame = 2 Query: 98 MPRSRINGNFIDKTFSIVANILLRIIPTTVGEKEAFTYYRDG 223 M RSRINGNFIDKTFSIVANILLRIIPTT GEKEAF YYRDG Sbjct: 1 MSRSRINGNFIDKTFSIVANILLRIIPTTSGEKEAFAYYRDG 42
BLAST of FC930813 vs. ExPASy Swiss-Prot
Match: YCF3_SACOF (Photosystem I assembly protein ycf3 OS=Saccharum officinarum GN=ycf3 PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.525e-14 Identity = 38/44 (86.36%), Postives = 40/44 (90.91%), Query Frame = 2 Query: 98 MPRSRINGNFIDKTFSIVANILLRIIPTTVGEKEAFTYYRDGAI 229 MPRSRINGNFIDKT SIVANILL+IIPTT GEK AFTYYRDG + Sbjct: 1 MPRSRINGNFIDKTSSIVANILLQIIPTTSGEKRAFTYYRDGML 44
BLAST of FC930813 vs. ExPASy Swiss-Prot
Match: YCF3_LOLPR (Photosystem I assembly protein ycf3 OS=Lolium perenne GN=ycf3 PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.525e-14 Identity = 38/44 (86.36%), Postives = 40/44 (90.91%), Query Frame = 2 Query: 98 MPRSRINGNFIDKTFSIVANILLRIIPTTVGEKEAFTYYRDGAI 229 MPRSR NGNFIDKT SIVANILLRIIPTT GEK+AFTYYRDG + Sbjct: 1 MPRSRANGNFIDKTSSIVANILLRIIPTTSGEKKAFTYYRDGML 44
BLAST of FC930813 vs. ExPASy Swiss-Prot
Match: YCF3_ILLOL (Photosystem I assembly protein ycf3 OS=Illicium oligandrum GN=ycf3 PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.525e-14 Identity = 39/42 (92.86%), Postives = 39/42 (92.86%), Query Frame = 2 Query: 98 MPRSRINGNFIDKTFSIVANILLRIIPTTVGEKEAFTYYRDG 223 M RSRINGNFIDKT SIVANILLRIIPTT GEKEAFTYYRDG Sbjct: 1 MSRSRINGNFIDKTSSIVANILLRIIPTTSGEKEAFTYYRDG 42 The following BLAST results are available for this feature:
BLAST of FC930813 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 82
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930813 ID=FC930813; Name=FC930813; organism=Citrus clementina; type=EST; length=666bpback to top |