FC930816

Overview
NameFC930816
Unique NameFC930816
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length739
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15219 contig Ccv1_Contig15219:1..739. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC930816 vs. ExPASy Swiss-Prot
Match: HPPA_NITEU (Pyrophosphate-energized proton pump OS=Nitrosomonas europaea GN=hppA PE=3 SV=1)

HSP 1 Score: 245.358 bits (625), Expect = 2.460e-64
Identity = 130/246 (52.85%), Postives = 166/246 (67.48%), Query Frame = 3
Query:    6 AIDAYAPISDNAGGIAEMAGMSHRIRERTDALDAAGNTTAAIGKGFAIGSAALVSLALFGAFVSRAA----ISTVDVLTPKVFIGLIVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTIPGLMEGTAKPDYATCVKISTDASIKEMIPPGALVMLTPLIVGIFFGVETLSGVLAGSLVSGVQIAISASNTGGAWDNAKKYIEAGASEHARTLGPKGSDPHKAAVIGDTIGDPLRTHLDHHLHP 731
            A+DAY PI+DNAGGIAEMAGM   +R  TD LDA GNTT A+ KG+AIGSA L +L LF  +         + T D+    V IGL +G M+P+ F AM+M++VG AA  +V EVRRQF  IPG+M+G+ KPDY+  V + T A+I+EMI P  L +L P++VG+F G + L GVL GS+V+G+ IAIS +  GGAWDNAKKYIE G        G KGSD HKAAV GDT+GDP +      ++P
Sbjct:  430 ALDAYGPITDNAGGIAEMAGMPESVRAVTDPLDAVGNTTKAVTKGYAIGSAGLAALVLFADYTHGLEHANKLMTFDLSNHLVIIGLFIGGMVPFLFGAMSMEAVGRAAGSVVLEVRRQFKEIPGIMDGSRKPDYSRAVDMLTKAAIREMIVPSLLPVLIPVLVGVFLGPQALGGVLMGSIVTGLFIAISMTAGGGAWDNAKKYIEDG------NYGGKGSDAHKAAVTGDTVGDPYKDTAGPAINP 669          
BLAST of FC930816 vs. ExPASy Swiss-Prot
Match: HPPA2_METMA (Pyrophosphate-energized proton pump 2 OS=Methanosarcina mazei GN=hppA2 PE=3 SV=1)

HSP 1 Score: 238.81 bits (608), Expect = 2.303e-62
Identity = 118/235 (50.21%), Postives = 166/235 (70.64%), Query Frame = 3
Query:    6 AIDAYAPISDNAGGIAEMAGMSHRIRERTDALDAAGNTTAAIGKGFAIGSAALVSLALFGAFVSRAAIST--VDVLTPKVFIGLIVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTIPGLMEGTAKPDYATCVKISTDASIKEMIPPGALVMLTPLIVGIFFGVETLSGVLAGSLVSGVQIAISASNTGGAWDNAKKYIEAGASEHARTLGPKGSDPHKAAVIGDTIGDPLR 704
            A+D+Y PI+DNAGGIA+MA +  ++R+ TD LD+ GNTT A+ KG+AIGS AL +LALF  + ++ ++ +  + + +P V  G+++GA+LP+ FSA+ M +VG AA ++V EVRRQF  IPG+MEGTAKP+Y  CV I T A++ +M  PG L ++ PL+ G F G E L+G+L G +V G  +A+   N GGAWDNAKK IE G        G KGS+ H+AAV+GDT+GDP +
Sbjct:  412 ALDSYGPITDNAGGIAQMANLPAQVRKVTDELDSVGNTTKAVTKGYAIGSTALGALALFADYRNKVSLESQSISLDSPVVLSGILLGAVLPFLFSAVMMSAVGKAAFEVVNEVRRQFREIPGIMEGTAKPEYGRCVDIVTKAALHDMAMPGFLAVIIPLLTGFFLGPEALAGLLTGLIVVGFMLALMMDNGGGAWDNAKKLIEDG------YYGGKGSEAHRAAVVGDTVGDPFK 640          
BLAST of FC930816 vs. ExPASy Swiss-Prot
Match: HPPA_THETN (Pyrophosphate-energized proton pump OS=Thermoanaerobacter tengcongensis GN=hppA PE=3 SV=1)

HSP 1 Score: 237.654 bits (605), Expect = 5.130e-62
Identity = 123/250 (49.20%), Postives = 163/250 (65.20%), Query Frame = 3
Query:    6 AIDAYAPISDNAGGIAEMAGMSHRIRERTDALDAAGNTTAAIGKGFAIGSAALVSLALFGAFVSRA---------AISTVDVLTPKVFIGLIVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTIPGLMEGTAKPDYATCVKISTDASIKEMIPPGALVMLTPLIVGIFFGVETLSGVLAGSLVSGVQIAISASNTGGAWDNAKKYIEAGASEHARTLGPKGSDPHKAAVIGDTIGDPLRTHLDHHLH 728
            A+D + PI+DNAGGI EM+G    IR  TD LDA GNTT A+ KG+AIGSAAL +  LF A++            +   VD+  P+VFIG  +GAM+ Y FS+  +++VG AA  ++ EVRRQF  IPG+MEGTAKPDYA  V I T  ++KEM+ PG +V++TP++VG+  G E  +  L    +SGV +A+  +N GGAWDNAKK+IE G        G KGSD HKA+V+GDT+GDP +      LH
Sbjct:  450 AMDTFGPITDNAGGITEMSGAPEEIRRVTDRLDACGNTTKALTKGYAIGSAALATFLLFSAYLDEVKKILGKPIDSWFPVDIGKPEVFIGAFIGAMIVYLFSSTAIRAVGKAAQYVILEVRRQFREIPGIMEGTAKPDYARAVDIVTKGALKEMVIPGLIVVVTPILVGVILGKEAAAAFLMIGTISGVILALYLNNGGGAWDNAKKFIELG------NYGGKGSDAHKASVVGDTVGDPFKDTAGPSLH 693          
BLAST of FC930816 vs. ExPASy Swiss-Prot
Match: HPPA2_RHOPA (Pyrophosphate-energized proton pump OS=Rhodopseudomonas palustris GN=hppA PE=3 SV=1)

HSP 1 Score: 237.654 bits (605), Expect = 5.130e-62
Identity = 121/237 (51.05%), Postives = 162/237 (68.35%), Query Frame = 3
Query:    6 AIDAYAPISDNAGGIAEMAGMSHRIRERTDALDAAGNTTAAIGKGFAIGSAALVSLALFG----AFVSRAAISTVDVLTPKVFIGLIVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTIPGLMEGTAKPDYATCVKISTDASIKEMIPPGALVMLTPLIVGIFFGVETLSGVLAGSLVSGVQIAISASNTGGAWDNAKKYIEAGASEHARTLGPKGSDPHKAAVIGDTIGDPLR 704
            A DAY PI+DNAGGIAEM+G+   +R+ TD LDA GNTT A+ KG+AIGSA L +L LF     A  +R    + D+   +V +GL +G ++PY F++M M++VG AA  +V EVRRQF  I G+MEGTAKP+Y T V + T A+IKEMI P  L ++ P++VG+  G   L G+L G++V+G+ + IS    GGAWDNAKK IE G ++    L  KGS+ HKAAV GDT+GDP +
Sbjct:  422 ARDAYGPITDNAGGIAEMSGLPDSVRDITDPLDAVGNTTKAVTKGYAIGSAGLAALVLFADYTHALEARGMSLSFDLSDHRVIVGLFIGGLIPYLFASMAMEAVGRAAGSVVVEVRRQFRDIKGIMEGTAKPEYGTAVDMLTTAAIKEMIVPSLLPVVAPILVGMLLGPAALGGLLMGTIVTGIFVGISMCTGGGAWDNAKKLIEEGFTDANGVLHKKGSEAHKAAVTGDTVGDPYK 658          
BLAST of FC930816 vs. ExPASy Swiss-Prot
Match: HPPA_THEMA (Pyrophosphate-energized proton pump OS=Thermotoga maritima GN=hppA PE=1 SV=1)

HSP 1 Score: 237.269 bits (604), Expect = 6.700e-62
Identity = 118/244 (48.36%), Postives = 168/244 (68.85%), Query Frame = 3
Query:    6 AIDAYAPISDNAGGIAEMAGMSHRIRERTDALDAAGNTTAAIGKGFAIGSAALVSLALFGAFVSR-----------AAISTVDVLTPKVFIGLIVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTIPGLMEGTAKPDYATCVKISTDASIKEMIPPGALVMLTPLIVGIFFGVETLSGVLAGSLVSGVQIAISASNTGGAWDNAKKYIEAGASEHARTLGPKGSDPHKAAVIGDTIGDPLR 704
            ++D+Y PI+DNAGGI+EM  +   +R+ TD LDA GNTTAAIGKGFAIGSA   +L+LF +++             + +  +++L  +V  G ++GA + Y+FS   + +V  AA+KMV+E+RRQ   IPGL+EG AKPDY  C++I++D ++K+M  P  + +LTPL+ G   G E + GVL G+++SG  +AI  +N+GGAWDNAKKY+EAG  E       KGS+PHKA VIGDT+GDPL+
Sbjct:  456 SVDSYGPIADNAGGISEMCELDPEVRKITDHLDAVGNTTAAIGKGFAIGSAIFAALSLFASYMFSQISPSDIGKPPSLVLLLNMLDARVIAGALLGAAITYYFSGYLISAVTKAAMKMVDEIRRQAREIPGLLEGKAKPDYNRCIEITSDNALKQMGYPAFIAILTPLVTGFLLGAEFVGGVLIGTVLSGAMLAILTANSGGAWDNAKKYLEAGNLEGY----GKGSEPHKALVIGDTVGDPLK 695          
BLAST of FC930816 vs. ExPASy Swiss-Prot
Match: HPPA_XANCP (Pyrophosphate-energized proton pump OS=Xanthomonas campestris pv. campestris GN=hppA PE=3 SV=1)

HSP 1 Score: 234.187 bits (596), Expect = 5.672e-61
Identity = 123/248 (49.60%), Postives = 162/248 (65.32%), Query Frame = 3
Query:    6 AIDAYAPISDNAGGIAEMAGMSHRIRERTDALDAAGNTTAAIGKGFAIGSAALVSLALFGAFVSRAA------ISTVDVLTPKVFIGLIVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTIPGLMEGTAKPDYATCVKISTDASIKEMIPPGALVMLTPLIVGIFFGVETLSGVLAGSLVSGVQIAISASNTGGAWDNAKKYIEAGASEHARTLGPKGSDPHKAAVIGDTIGDPLRTHLDHHLHP 731
            A+DAY PI+DNAGGIAEMA +   +R  TD LDA GNTT A+ KG+AIGSAAL +L LF  +           +   D+    V IGL++G ++PY F AM M++VG AA  +VEEVRRQF  IPG+M GTAKP Y   V + T ++I+EMI P  L ++ P+IVG+  G   L G+L G++V+G+ +AIS +  GGAWDNAKKYIE G        G KGS+ HKAA+ GDT+GDP +      ++P
Sbjct:  418 ALDAYGPITDNAGGIAEMAELPPEVRNVTDPLDAVGNTTKAVTKGYAIGSAALAALVLFADYTHNLQAANPNEVFAFDLSDHTVIIGLLIGGLIPYLFGAMAMEAVGRAAGAVVEEVRRQFRDIPGIMTGTAKPQYDRAVDMLTRSAIREMIVPSLLPVVVPVIVGLLLGPRALGGLLIGTIVTGLFVAISMTTGGGAWDNAKKYIEDG------HFGGKGSEAHKAAITGDTVGDPYKDTAGPAINP 659          
BLAST of FC930816 vs. ExPASy Swiss-Prot
Match: HPPA_CHLAA (Pyrophosphate-energized proton pump OS=Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl) GN=hppA PE=3 SV=2)

HSP 1 Score: 233.417 bits (594), Expect = 9.675e-61
Identity = 122/258 (47.29%), Postives = 169/258 (65.50%), Query Frame = 3
Query:    6 AIDAYAPISDNAGGIAEMAGMSHRIRERTDALDAAGNTTAAIGKGFAIGSAALVSLALFGAFVSRA----------------AISTVDVLTPKVFIGLIVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTIPGLMEGTAKPDYATCVKISTDASIKEMIPPGALVMLTPLIVGIFFGVETLSGVLAGSLVSGVQIAISASNTGGAWDNAKKYIEAGASEHARTLGPKGSDPHKAAVIGDTIGDPLRTHLDHHLHP 731
            ++D++ PISDNA GI EMAG+    R   D LDA GNTT A+ KG AIGSA + ++AL+G++ +                   +++++V  P VFIGL++G  +P+ FSA+T+++V  AA ++V EVRRQF  IPGLMEG  +PDYA  V+IST A+ KE+I  G + ++ P+IVG   GVE L G LAG +++G  +A+  +N GGAWDNAKKYIE G        G K S+PHKAAV+GDT+GDPL+      L+P
Sbjct:  463 SMDSFGPISDNANGIGEMAGLDKNARNVMDDLDAVGNTTKAVTKGIAIGSAVIAAVALYGSYFTDVNKVLQQMINEGRQGIELLASINVAAPPVFIGLLIGGAVPFLFSALTIRAVSRAAAQIVNEVRRQFR-IPGLMEGKVQPDYARAVQISTTAAQKELISLGLIAVMVPIIVGFTLGVEALGGFLAGIILTGQLMAVFQANAGGAWDNAKKYIEEG------NFGGKHSEPHKAAVVGDTVGDPLKDTAGPALNP 713          
BLAST of FC930816 vs. ExPASy Swiss-Prot
Match: HPPA_XANAC (Pyrophosphate-energized proton pump OS=Xanthomonas axonopodis pv. citri GN=hppA PE=3 SV=1)

HSP 1 Score: 231.876 bits (590), Expect = 2.815e-60
Identity = 122/248 (49.19%), Postives = 161/248 (64.92%), Query Frame = 3
Query:    6 AIDAYAPISDNAGGIAEMAGMSHRIRERTDALDAAGNTTAAIGKGFAIGSAALVSLALFGAFVSRAA------ISTVDVLTPKVFIGLIVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTIPGLMEGTAKPDYATCVKISTDASIKEMIPPGALVMLTPLIVGIFFGVETLSGVLAGSLVSGVQIAISASNTGGAWDNAKKYIEAGASEHARTLGPKGSDPHKAAVIGDTIGDPLRTHLDHHLHP 731
            A+DAY PI+DNAGGIAEMA +   +R  TD LDA GNTT A+ KG+AIGSAAL +L LF  +           +   D+    V IGL++G ++PY F AM M++VG AA  +VEEVRRQF  +PG+M GTAKP Y   V + T ++I EMI P  L ++ P+IVG+  G   L G+L G++V+G+ +AIS +  GGAWDNAKKYIE G        G KGS+ HKAA+ GDT+GDP +      ++P
Sbjct:  418 ALDAYGPITDNAGGIAEMAELPPEVRNITDPLDAVGNTTKAVTKGYAIGSAALAALVLFADYTHNLQAANPDQVYAFDLSDHTVIIGLLIGGLIPYLFGAMAMEAVGRAAGAVVEEVRRQFRELPGIMAGTAKPQYDRAVDMLTRSAIGEMIVPSLLPVVVPIIVGLLLGPRALGGLLIGTIVTGLFLAISMTTGGGAWDNAKKYIEDG------HFGGKGSEAHKAAITGDTVGDPYKDTAGPAINP 659          
BLAST of FC930816 vs. ExPASy Swiss-Prot
Match: HPPA_BACTN (Pyrophosphate-energized proton pump OS=Bacteroides thetaiotaomicron GN=hppA PE=3 SV=1)

HSP 1 Score: 228.794 bits (582), Expect = 2.383e-59
Identity = 122/264 (46.21%), Postives = 160/264 (60.61%), Query Frame = 3
Query:    6 AIDAYAPISDNAGGIAEMAGMSHRIRERTDALDAAGNTTAAIGKGFAIGSAALVSLALFGAFVSRAAIS-----TVDV--------------------------LTPKVFIGLIVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTIPGLMEGTAKPDYATCVKISTDASIKEMIPPGALVMLTPLIVGIFFGVETLSGVLAGSLVSGVQIAISASNTGGAWDNAKKYIEAGASEHARTLGPKGSDPHKAAVIGDTIGDPLR 704
            A DAY PI+DNAGG AEMAG+   +R+RTDALD+ GNTTAA GKGFAIGSAAL  LAL  +++    I      TVD+                          + PKV  G+ +G+M+ + F  +TM +VG AA  MV+EVRRQF  I G++ G A+PDY  CV IST  + +EM+ P  + +L P+  G+ FGV  + G+L G L +G  +AI  +N GGAWDNAKKY+E G        G KG + HKA V+GDT+GDP +
Sbjct:  446 ATDAYGPIADNAGGNAEMAGLGAEVRKRTDALDSLGNTTAATGKGFAIGSAALTGLALLASYIEEIRIGLTRLGTVDLSMPNGDVVSTANATFVDFMNYYDVTLMNPKVLSGMFLGSMMAFLFCGLTMNAVGRAAGHMVDEVRRQFREIKGILTGEAEPDYERCVAISTKGAQREMVIPSLIAILAPIATGLIFGVTGVLGLLIGGLSTGFVLAIFMANAGGAWDNAKKYVEEG------NFGGKGGEVHKATVVGDTVGDPFK 703          
BLAST of FC930816 vs. ExPASy Swiss-Prot
Match: HPPA_RHORT (Pyrophosphate-energized proton pump OS=Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) GN=hppA PE=1 SV=3)

HSP 1 Score: 226.868 bits (577), Expect = 9.055e-59
Identity = 127/256 (49.61%), Postives = 165/256 (64.45%), Query Frame = 3
Query:    6 AIDAYAPISDNAGGIAEMAGMSHRIRERTDALDAAGNTTAAIGKGFAIGSAALVSLALFGAFV-----------SRAAISTVDV----LTPKVFIGLIVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTIPGLMEGTAKPDYATCVKISTDASIKEMIPPGALVMLTPLIV-GIFFGV-------ETLSGVLAGSLVSGVQIAISASNTGGAWDNAKKYIEAGASEHARTLGPKGSDPHKAAVIGDTIGDPLR 704
            A+DAY P++DNAGGIAEMA +   +R+ TDALDA GNTT A+ KG+AIGSA L +L LF A+            +  A + VDV     +P V +GL +G +LPY F +M M +VG AA  +VEEVRRQF  IPG+MEGTAKP+Y  CV + T A+IKEMI P  L +L P+++  +  G+         L  +L G +V+G+ +AIS +  GGAWDNAKKYIE G        G KGS+ HKAAV GDT+GDP +
Sbjct:  426 ALDAYGPVTDNAGGIAEMANLPEDVRKTTDALDAVGNTTKAVTKGYAIGSAGLGALVLFAAYTEDLAFFKANVDAYPAFAGVDVNFSLSSPYVVVGLFIGGLLPYLFGSMGMTAVGRAAGSVVEEVRRQFREIPGIMEGTAKPEYGRCVDMLTKAAIKEMIIPSLLPVLAPIVLYFVILGIADKSAAFSALGAMLLGVIVTGLFVAISMTAGGGAWDNAKKYIEDG------HYGGKGSEAHKAAVTGDTVGDPYK 675          
The following BLAST results are available for this feature:
BLAST of FC930816 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 41
Match NameE-valueIdentityDescription
HPPA_NITEU2.460e-6452.85Pyrophosphate-energized proton pump OS=Nitrosomona... [more]
HPPA2_METMA2.303e-6250.21Pyrophosphate-energized proton pump 2 OS=Methanosa... [more]
HPPA_THETN5.130e-6249.20Pyrophosphate-energized proton pump OS=Thermoanaer... [more]
HPPA2_RHOPA5.130e-6251.05Pyrophosphate-energized proton pump OS=Rhodopseudo... [more]
HPPA_THEMA6.700e-6248.36Pyrophosphate-energized proton pump OS=Thermotoga ... [more]
HPPA_XANCP5.672e-6149.60Pyrophosphate-energized proton pump OS=Xanthomonas... [more]
HPPA_CHLAA9.675e-6147.29Pyrophosphate-energized proton pump OS=Chloroflexu... [more]
HPPA_XANAC2.815e-6049.19Pyrophosphate-energized proton pump OS=Xanthomonas... [more]
HPPA_BACTN2.383e-5946.21Pyrophosphate-energized proton pump OS=Bacteroides... [more]
HPPA_RHORT9.055e-5949.61Pyrophosphate-energized proton pump OS=Rhodospiril... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC34109D01EF PostHarvP1 Citrus clementina cDNA clone C34109D01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930816 ID=FC930816; Name=FC930816; organism=Citrus clementina; type=EST; length=739bp
GATAGGCTATTGATGCATATGCTCCCATCAGTGACAATGCTGGAGGCATT
GCTGAGATGGCAGGCATGAGCCACAGAATCAGAGAGAGAACTGATGCTCT
TGATGCTGCAGGAAACACCACTGCAGCTATTGGAAAGGGTTTCGCCATTG
GTTCTGCAGCTCTTGTGTCGCTAGCCCTCTTTGGTGCCTTTGTGAGCCGT
GCAGCTATTTCAACTGTTGATGTGTTGACTCCAAAAGTGTTTATTGGTTT
GATTGTTGGTGCTATGCTTCCTTACTGGTTCTCTGCCATGACAATGAAGA
GTGTGGGAAGTGCAGCTCTTAAAATGGTTGAGGAAGTGCGCAGGCAATTT
AACACCATCCCTGGTCTTATGGAAGGCACTGCCAAACCTGATTATGCTAC
CTGTGTTAAGATCTCCACCGATGCATCCATCAAAGAGATGATCCCACCTG
GTGCCCTTGTCATGCTTACACCCCTTATTGTTGGTATCTTTTTTGGTGTG
GAAACTCTCTCTGGGGTCCTTGCCGGTTCCCTTGTCTCAGGTGTACAGAT
TGCTATCTCTGCATCCAACACTGGTGGTGCCTGGGATAACGCCAAGAAGT
ACATTGAGGCTGGCGCTTCAGAGCACGCCAGAACTCTTGGTCCAAAAGGA
TCAGATCCACACAAGGCTGCGGTCATTGGTGACACAATTGGGGATCCATT
AAGGACACATCTGGACCATCACTTACATCCTAATCAGCT
back to top