FC930817

Overview
NameFC930817
Unique NameFC930817
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length694
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930817 vs. ExPASy Swiss-Prot
Match: LGMN_MOUSE (Legumain OS=Mus musculus GN=Lgmn PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 3.983e-13
Identity = 46/114 (40.35%), Postives = 67/114 (58.77%), Query Frame = 1
Query:  166 YDSPLQDYNGENCTANNFFC----NKISLSGR-SGKVVNSGPNHCTFFIFNYADHGSPEMLGMPSGDNLSAKDLIAVLERKHEAKSYKRIVFYLEACESGSMFDGLLTENKNIY 492
            Y   L+DY GE+ T  NF      +  ++ G+ SGKV+ SGP    F  F   DHG+  +L  P+ D+L  KDL   +   +E K Y+++VFY+EACESGSM +  L ++ N+Y
Sbjct:   98 YKGVLKDYTGEDVTPENFLAVLRGDAEAVKGKGSGKVLKSGPRDHVFIYFT--DHGATGILVFPN-DDLHVKDLNKTIRYMYEHKMYQKMVFYIEACESGSMMNH-LPDDINVY 207          
BLAST of FC930817 vs. ExPASy Swiss-Prot
Match: HGLB_SCHMA (Hemoglobinase OS=Schistosoma mansoni PE=1 SV=3)

HSP 1 Score: 74.7146 bits (182), Expect = 5.202e-13
Identity = 41/109 (37.61%), Postives = 58/109 (53.21%), Query Frame = 1
Query:  166 YDSPLQDYNGENCTANNFFCNKISLSGRSGKVVNSGPNHCTFFIFNYADHGSPEMLGMPSGDNLSAKDLIAVLERKHEAKSYKRIVFYLEACESGSMFDGLLTENKNIY 492
            Y+  + DY G+N  +  F           GKV+ SG N   F  F   DHG+P ++  P  D L AK+ ++ L+  H  K Y ++V Y+EA ESGSMF  +L  N +IY
Sbjct:  104 YEGVVIDYRGKNVNSKTFLKVLKGDKSAGGKVLKSGKNDDVFIYFT--DHGAPGLIAFPD-DELYAKEFMSTLKYLHSHKRYSKLVIYIEANESGSMFQQILPSNLSIY 209          
BLAST of FC930817 vs. ExPASy Swiss-Prot
Match: HGLB_SCHJA (Hemoglobinase OS=Schistosoma japonicum GN=HAEM PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.977e-12
Identity = 43/109 (39.45%), Postives = 56/109 (51.38%), Query Frame = 1
Query:  166 YDSPLQDYNGENCTANNFFCNKISLSGRSGKVVNSGPNHCTFFIFNYADHGSPEMLGMPSGDNLSAKDLIAVLERKHEAKSYKRIVFYLEACESGSMFDGLLTENKNIY 492
            Y   + DY G+      F           GKV+ SG N   F  F   DHG+P +L  P  D+L AK  I  L+   + + Y ++V Y+EACESGSMF GLL  + NIY
Sbjct:   98 YKGVVIDYKGKKVNPKTFLQVLKGDKRAGGKVLKSGKNDDVFIYFT--DHGAPGILAFPD-DDLHAKPFINTLKYLRQHRRYSKLVIYVEACESGSMFAGLLPTDINIY 203          
BLAST of FC930817 vs. ExPASy Swiss-Prot
Match: LGMN_HUMAN (Legumain OS=Homo sapiens GN=LGMN PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.372e-12
Identity = 46/114 (40.35%), Postives = 64/114 (56.14%), Query Frame = 1
Query:  166 YDSPLQDYNGENCTANNFFC----NKISLSG-RSGKVVNSGPNHCTFFIFNYADHGSPEMLGMPSGDNLSAKDLIAVLERKHEAKSYKRIVFYLEACESGSMFDGLLTENKNIY 492
            Y    +DY GE+ T  NF      +  ++ G  SGKV+ SGP    F  F   DHGS  +L  P+ D L  KDL   +   ++ K Y+++VFY+EACESGSM +  L +N N+Y
Sbjct:   96 YQGVPKDYTGEDVTPQNFLAVLRGDAEAVKGIGSGKVLKSGPQDHVFIYFT--DHGSTGILVFPNED-LHVKDLNETIHYMYKHKMYRKMVFYIEACESGSMMNH-LPDNINVY 205          
BLAST of FC930817 vs. ExPASy Swiss-Prot
Match: LGMN_BOVIN (Legumain OS=Bos taurus GN=LGMN PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 5.752e-12
Identity = 44/106 (41.51%), Postives = 60/106 (56.60%), Query Frame = 1
Query:  166 YDSPLQDYNGENCTANNFFC----NKISLSG-RSGKVVNSGPNHCTFFIFNYADHGSPEMLGMPSGDNLSAKDLIAVLERKHEAKSYKRIVFYLEACESGSMFDGL 468
            Y   L+DY GE+ T  NF      +  ++ G  SGKV+ SGP    F  F   DHG+  +L  P+ D L  KDL   +   +E K Y+++VFY+EACESGSM + L
Sbjct:   96 YQGVLKDYTGEDVTPKNFLAVLRGDAEAVKGVGSGKVLKSGPRDHVFVYFT--DHGATGILVFPNED-LHVKDLNETIRYMYEHKMYQKMVFYIEACESGSMMNHL 198          
BLAST of FC930817 vs. ExPASy Swiss-Prot
Match: LGMN_MACFA (Legumain OS=Macaca fascicularis GN=LGMN PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 7.512e-12
Identity = 46/114 (40.35%), Postives = 64/114 (56.14%), Query Frame = 1
Query:  166 YDSPLQDYNGENCTANNFFC----NKISLSG-RSGKVVNSGPNHCTFFIFNYADHGSPEMLGMPSGDNLSAKDLIAVLERKHEAKSYKRIVFYLEACESGSMFDGLLTENKNIY 492
            Y    +DY GE+ T  NF      +  ++ G  SGKV+ SGP    F  F   DHGS  +L  P+ D L  KDL   +   ++ K Y+++VFY+EACESGSM +  L +N N+Y
Sbjct:   96 YQGVPKDYTGEDVTPQNFLAVLRGDAEAVKGIGSGKVLKSGPQDHVFVYFT--DHGSTGILVFPNED-LHVKDLNETIYYMYKHKMYRKMVFYIEACESGSMMNH-LPDNINVY 205          
BLAST of FC930817 vs. ExPASy Swiss-Prot
Match: LGMN_RAT (Legumain OS=Rattus norvegicus GN=Lgmn PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 9.811e-12
Identity = 43/106 (40.57%), Postives = 61/106 (57.55%), Query Frame = 1
Query:  166 YDSPLQDYNGENCTANNFFC----NKISLSGR-SGKVVNSGPNHCTFFIFNYADHGSPEMLGMPSGDNLSAKDLIAVLERKHEAKSYKRIVFYLEACESGSMFDGL 468
            Y    +DY GE+ T  NF      ++ ++ G+ SGKV+ SGP    F  F   DHG+  +L  P+ D L  KDL   +   +E K Y+++VFY+EACESGSM + L
Sbjct:   98 YKGVPKDYTGEDVTPENFLAVLRGDEEAVKGKGSGKVLKSGPRDHVFVYFT--DHGATGILVFPNED-LHVKDLNKTIRYMYEHKMYQKMVFYIEACESGSMMNHL 200          
BLAST of FC930817 vs. ExPASy Swiss-Prot
Match: LGMN_PONAB (Legumain OS=Pongo abelii GN=LGMN PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.306e-11
Identity = 45/115 (39.13%), Postives = 66/115 (57.39%), Query Frame = 1
Query:  166 YDSPLQDYNGENCTANNFFC----NKISLSG-RSGKVVNSGPNHCTFFIFNYA-DHGSPEMLGMPSGDNLSAKDLIAVLERKHEAKSYKRIVFYLEACESGSMFDGLLTENKNIY 492
            Y    +DY GE+ T  NF      +  ++ G  SGKV+ SGP      +F Y+ DHGS  +L  P+ D L  +DL   +   ++ K Y+++VFY+EACESGSM +  L +N N+Y
Sbjct:   96 YQGVPKDYTGEDVTPQNFLAVLRGDAEAVKGIGSGKVLKSGPQD---HVFVYSTDHGSTGILVFPNED-LHVEDLNETIHYMYKHKMYRKMVFYIEACESGSMMNH-LPDNINVY 205          
The following BLAST results are available for this feature:
BLAST of FC930817 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 18
Match NameE-valueIdentityDescription
LGMN_MOUSE3.983e-1340.35Legumain OS=Mus musculus GN=Lgmn PE=1 SV=1[more]
HGLB_SCHMA5.202e-1337.61Hemoglobinase OS=Schistosoma mansoni PE=1 SV=3[more]
HGLB_SCHJA1.977e-1239.45Hemoglobinase OS=Schistosoma japonicum GN=HAEM PE=... [more]
LGMN_HUMAN3.372e-1240.35Legumain OS=Homo sapiens GN=LGMN PE=1 SV=1[more]
LGMN_BOVIN5.752e-1241.51Legumain OS=Bos taurus GN=LGMN PE=1 SV=1[more]
LGMN_MACFA7.512e-1240.35Legumain OS=Macaca fascicularis GN=LGMN PE=2 SV=1[more]
LGMN_RAT9.811e-1240.57Legumain OS=Rattus norvegicus GN=Lgmn PE=2 SV=1[more]
LGMN_PONAB8.306e-1139.13Legumain OS=Pongo abelii GN=LGMN PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionC34109D02EF PostHarvP1 Citrus clementina cDNA clone C34109D02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930817 ID=FC930817; Name=FC930817; organism=Citrus clementina; type=EST; length=694bp
GAGTGAAGGGAAATGGTTTAACTTCTGCTTTGAAAGCCTTTGTTCATCCA
CACATTGCACAATCCATTAGTTTCTTCTCACTGCAGAATCCCTCAGGTGT
TATATATCTTTTTCTTCCTTTTTACTTTTCGAATATTTTCAATAAAATAT
TCATGATCTTTAAGTTATGATTCTCCTTTACAGGACTACAATGGTGAAAA
CTGTACTGCCAACAATTTTTTTTGCAACAAAATTTCTCTTTCAGGGCGCA
GTGGCAAGGTCGTGAATAGTGGTCCAAATCATTGTACATTTTTTATTTTT
AATTATGCAGATCATGGTAGCCCCGAGATGCTTGGAATGCCTTCTGGAGA
TAACCTTTCCGCCAAAGATCTAATTGCAGTGTTAGAAAGGAAGCATGAAG
CTAAATCTTATAAACGCATCGTATTTTACCTTGAAGCCTGTGAATCTGGA
AGCATGTTTGATGGCCTTCTTACAGAAAATAAGAACATATACATGGCCTT
CCCACTCTGCCGTGCTCTGGGGTAATGTAACCGAATGTGCCTGCTGTATC
ACCGCTAACTAGGCTTCCAACTGATCAGACAAGCAAGCCCAAAGTCTACA
ACTTTTGCTTCAAATTCCTTATTGAGCAAAATGTTGCTTACTTTGCTCCA
CGAATCATCTGTAGTGATGTCAAAGTGAGCAGCATTTTTGCTCA
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