FC930821

Overview
NameFC930821
Unique NameFC930821
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length672
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15221 contig Ccv1_Contig15221:1..672. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC930821 vs. ExPASy Swiss-Prot
Match: STCU_EMENI (Versicolorin reductase OS=Emericella nidulans GN=stcU PE=3 SV=2)

HSP 1 Score: 83.5741 bits (205), Expect = 1.054e-15
Identity = 63/191 (32.98%), Postives = 97/191 (50.79%), Query Frame = 1
Query:    4 VINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVVVPQQKGCILFTASACTEIAGLGSPA-YTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVD---------PALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGG 546
            V  L+D AV  FG LDI+ +NAGI+  SFG + D    + +R+  VNT G F  A+ A R +  ++ G I+ T+S    + G+   A Y+ SK  I   V+CLA + G   I VN V+P  + T M +    +            ++   + +  L    L  D +A    +LASD + ++SG+ + VDGG
Sbjct:   76 VTKLMDQAVEHFGYLDIVSSNAGIV--SFGHVKDVTPDEFDRVFRVNTRGQFFVAREAYRHL--REGGRIILTSSNTASVKGVPRHAVYSGSKGAIDTFVRCLAIDCGDKKITVNAVAPGAIKTDMFLSVSREYIPNGETFTDEQVDECAAWLSPLNRVGLPVD-VARVVSFLASDAAEWISGKIIGVDGG 261          
BLAST of FC930821 vs. ExPASy Swiss-Prot
Match: LVR_LEIAQ (Levodione reductase OS=Leifsonia aquatica GN=lvr PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.376e-15
Identity = 57/185 (30.81%), Postives = 101/185 (54.59%), Query Frame = 1
Query:   16 VDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVVVPQQKGCILFTASACTEIAGLGSPA-YTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGM---SMKGGVDPALIESSMSQ--MGNLKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGGFS 552
            V     +FG++D  +NNAGI  +   +   T  ++ ++++++N  G FLG +   +++  Q  G ++ TAS    I G+G+ + Y  +K+G++GL +  A E G+YGIR+N ++P  + T M   SMK  +DP     +  +    N    + +   IA    +L SD++SYV+   + +DGG S
Sbjct:   83 VTATTERFGRIDGFFNNAGIEGKQNPTESFTA-AEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASV-GGIRGIGNQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMK-QLDPENPRKAAEEFIQVNPSKRYGEAPEIAAVVAFLLSDDASYVNATVVPIDGGQS 264          
BLAST of FC930821 vs. ExPASy Swiss-Prot
Match: FABG_STAES (3-oxoacyl-[acyl-carrier-protein] reductase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=fabG PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.376e-15
Identity = 55/182 (30.22%), Postives = 93/182 (51.10%), Query Frame = 1
Query:    1 EVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVVVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGG 546
            EV  ++   VS+FG +D++ NNAGI   +   ++   + + + +I+ N  G F   +     ++ Q+ G I+   S    +   G   Y  +K G++GL K  A EL   GI VN V+P  + + M+     D   ++  M +   LK  F +   IAN   +LASD++ Y++GQ + V+GG
Sbjct:   66 EVKEMIKEVVSQFGSVDVLVNNAGITKDNL--LMRMKEQEWDDVIDTNLKGVFNCIQKVTPQMLRQRSGAIINLTSIVGAMGNPGQANYVATKAGVIGLTKTAARELASRGITVNAVAPGFIVSDMTNALSDD---LKDQMLEQIPLK-RFGEDTDIANTVAFLASDKAKYITGQTIHVNGG 241          
BLAST of FC930821 vs. ExPASy Swiss-Prot
Match: FABG_STAEQ (3-oxoacyl-[acyl-carrier-protein] reductase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=fabG PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.376e-15
Identity = 55/182 (30.22%), Postives = 93/182 (51.10%), Query Frame = 1
Query:    1 EVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVVVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGG 546
            EV  ++   VS+FG +D++ NNAGI   +   ++   + + + +I+ N  G F   +     ++ Q+ G I+   S    +   G   Y  +K G++GL K  A EL   GI VN V+P  + + M+     D   ++  M +   LK  F +   IAN   +LASD++ Y++GQ + V+GG
Sbjct:   66 EVKEMIKEVVSQFGSVDVLVNNAGITKDNL--LMRMKEQEWDDVIDTNLKGVFNCIQKVTPQMLRQRSGAIINLTSIVGAMGNPGQANYVATKAGVIGLTKTAARELASRGITVNAVAPGFIVSDMTNALSDD---LKDQMLEQIPLK-RFGEDTDIANTVAFLASDKAKYITGQTIHVNGG 241          
BLAST of FC930821 vs. ExPASy Swiss-Prot
Match: DHRS4_BOVIN (Dehydrogenase/reductase SDR family member 4 OS=Bos taurus GN=DHRS4 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.376e-15
Identity = 60/180 (33.33%), Postives = 95/180 (52.78%), Query Frame = 1
Query:   13 LVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVVVPQQKGCILFTAS--ACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGG 546
            LV TAV   G +DI+ +NA +    FGS++D P+   +++++VN     L  K     +  +  G I+  +S  A +    LG   Y +SK  +LGL K LA EL +  +RVNC++P  + T  S     DPA  ES  +    +K    K +  A    +L S+++SY++G+ +VV GG
Sbjct:   81 LVATAVKLHGGVDILISNAAV-SPFFGSLMDVPEEVWDKILDVNVKATALLTKAVVPEMAKRGGGSIVIVSSIAAYSPFPSLGP--YNVSKTALLGLTKNLALELAESNVRVNCLAPGLIRTSFSRVLWEDPARQESIKATF-QIK-RIGKPEECAGIVSFLCSEDASYITGETVVVAGG 255          
BLAST of FC930821 vs. ExPASy Swiss-Prot
Match: DHGB_BACME (Glucose 1-dehydrogenase B OS=Bacillus megaterium GN=gdhB PE=1 SV=2)

HSP 1 Score: 83.1889 bits (204), Expect = 1.376e-15
Identity = 70/189 (37.04%), Postives = 103/189 (54.50%), Query Frame = 1
Query:    1 EVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVVVPQQ-KGCILFTASACT-EIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDP---ALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGGFS 552
            +VINLV +A+ +FGKLD+M NNAG+   +  S  +   SD  ++I+ N  G FLG++ A +  V    KG ++  +S    +I       Y  SK G+  + + LA E    GIRVN + P  + T ++ +   DP   A +E SM  MG + GE    + IA A  +LAS E+SYV+G  L  DGG +
Sbjct:   72 DVINLVQSAIKEFGKLDVMINNAGM--ENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEWKIPWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADPEQRADVE-SMIPMGYI-GE---PEEIA-AVAWLASSEASYVTGITLFADGGMT 252          
BLAST of FC930821 vs. ExPASy Swiss-Prot
Match: LINX_PSEPA (2,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydrogenase OS=Pseudomonas paucimobilis GN=linX PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.347e-15
Identity = 58/182 (31.87%), Postives = 87/182 (47.80%), Query Frame = 1
Query:   10 NLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVVVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGGFSV 555
            N +  AV  FG L  + N AGI+    G   +       +++ VN    FLG K A   +V    G I+  +S        G+ +Y  +K  +  + K  A E    G+RVN + P G+ T ++     D    ++S   MG L         IAN AL+LASDE+ Y++G +L +DGG+SV
Sbjct:   73 NAIAAAVDGFGGLTTLSNTAGIIHP--GGFEEESIEGWNKMVAVNQTAIFLGIKAAIPELVKSGNGSIINISSLIGMFPTAGNASYCATKAAVRIMSKAAALEFVDRGVRVNTIVPGGMNTPITANVPPDVLKQQTSQIPMGKLGDPI----DIANGALFLASDEAKYITGVDLPIDGGWSV 248          
BLAST of FC930821 vs. ExPASy Swiss-Prot
Match: Y4MP_RHISN (Uncharacterized short-chain type dehydrogenase/reductase y4mP OS=Rhizobium sp. (strain NGR234) GN=NGR_a02430 PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.065e-15
Identity = 62/190 (32.63%), Postives = 98/190 (51.58%), Query Frame = 1
Query:   19 DTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVVVPQQK----GCILFTASACTEIAG--LGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGL----ATGMSMKGGVDPALIES-SMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGGFSV 555
            D  +S FG  +I+ NNAGI        LD   +D +R++ VN      G  + ++V +P  +    G I   +S   +  G   G P Y+ +K G+LGL K +A E G   IRVNCV+P GL     TG  +   +   +++   +S++G+ +        +AN  L+LASD S+YV+G  + V+GG  +
Sbjct:   77 DEVLSAFGVANILINNAGITQPV--KTLDISDADWQRIVAVN----MTGVLNLSQVFIPNMRQNGGGSIACMSSVSAQRGGGIFGGPHYSAAKAGVLGLAKAMAREFGPDSIRVNCVTP-GLIQTDITGDKLSAEMRADIVKGIPLSRLGDAR-------DVANIYLFLASDLSAYVTGAVIDVNGGMLI 252          
BLAST of FC930821 vs. ExPASy Swiss-Prot
Match: LINC_PSEPA (2,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydrogenase OS=Pseudomonas paucimobilis GN=linC PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.065e-15
Identity = 60/190 (31.58%), Postives = 99/190 (52.11%), Query Frame = 1
Query:    1 EVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERL---INVNTIGGFLGAKHAARVVVPQ-QKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGGFSVV 558
            +V  LV   ++ FG LD  +NNA I        L   +  LER    +++N  G FL  K+    ++ +  KG I+ TASA   +       Y  +K+ ++GL +  AA+ G++GIRVN + P  + T M  +   + A +E  ++ +  + G F +    A AA++L SD +S+V+G  L  DGGF+ +
Sbjct:   66 DVKALVAQTLAAFGGLDGSFNNAAIPQAG----LPLAEVSLERFRQSMDINVTGTFLCMKYQILAMIERGTKGSIVNTASAAGVVGVPMHGEYVGAKHAVVGLTRVAAADYGKHGIRVNALVPGAVRTPMLQRAMDNDAGLEPYLNSIHPI-GRFSEPHEQAQAAVWLLSDAASFVTGSCLAADGGFTAI 250          
BLAST of FC930821 vs. ExPASy Swiss-Prot
Match: GNO_GLUOX (Gluconate 5-dehydrogenase OS=Gluconobacter oxydans GN=gno PE=1 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.065e-15
Identity = 55/184 (29.89%), Postives = 99/184 (53.80%), Query Frame = 1
Query:    4 VINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVVVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGGFSV 555
            VI+ V       G +DI+ NNAGI  R+   + +  + D + L++ N    F   +  AR ++P+ +G I+   S  +E+A  G   YT +K  +  L K +A + G++G+++N ++P   AT M+ +   D    +    +     G + + + +  AA++L+S  SS+V+GQ L+VDGG +V
Sbjct:   75 VIDGVAAIERDMGPIDILINNAGIQRRA--PLEEFSRKDWDDLMSTNVNAVFFVGQAVARHMIPRGRGKIVNICSVQSELARPGIAPYTATKGAVKNLTKGMATDWGRHGLQINGLAPGYFATEMTERLVADEEFTDWLCKRTP--AGRWGQVEELVGAAVFLSSRASSFVNGQVLMVDGGITV 254          
The following BLAST results are available for this feature:
BLAST of FC930821 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 173
Match NameE-valueIdentityDescription
STCU_EMENI1.054e-1532.98Versicolorin reductase OS=Emericella nidulans GN=s... [more]
LVR_LEIAQ1.376e-1530.81Levodione reductase OS=Leifsonia aquatica GN=lvr P... [more]
FABG_STAES1.376e-1530.223-oxoacyl-[acyl-carrier-protein] reductase OS=Stap... [more]
FABG_STAEQ1.376e-1530.223-oxoacyl-[acyl-carrier-protein] reductase OS=Stap... [more]
DHRS4_BOVIN1.376e-1533.33Dehydrogenase/reductase SDR family member 4 OS=Bos... [more]
DHGB_BACME1.376e-1537.04Glucose 1-dehydrogenase B OS=Bacillus megaterium G... [more]
LINX_PSEPA2.347e-1531.872,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydroge... [more]
Y4MP_RHISN3.065e-1532.63Uncharacterized short-chain type dehydrogenase/red... [more]
LINC_PSEPA3.065e-1531.582,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydroge... [more]
GNO_GLUOX3.065e-1529.89Gluconate 5-dehydrogenase OS=Gluconobacter oxydans... [more]

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Properties
Property NameValue
Genbank descriptionC34109D06EF PostHarvP1 Citrus clementina cDNA clone C34109D06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930821 ID=FC930821; Name=FC930821; organism=Citrus clementina; type=EST; length=672bp
GAAGTCATCAATCTCGTTGATACCGCCGTTTCTAAATTTGGAAAGCTCGA
TATCATGTACAACAATGCAGGAATTCTTGACCGCAGCTTTGGGAGCATTT
TGGACACTCCAAAGTCTGATCTAGAACGCTTAATTAATGTAAACACTATA
GGTGGTTTCTTAGGAGCCAAGCATGCTGCAAGAGTCGTGGTGCCACAGCA
AAAAGGTTGCATACTGTTTACAGCTAGTGCTTGTACAGAAATTGCAGGGC
TTGGCTCCCCTGCTTATACAATATCCAAATATGGGATTTTAGGACTAGTA
AAGTGCTTGGCAGCAGAGCTTGGACAGTATGGAATAAGAGTAAATTGCGT
CTCGCCTTATGGTTTGGCGACAGGAATGTCGATGAAAGGTGGGGTCGATC
CGGCTCTAATAGAATCATCAATGAGCCAGATGGGTAATCTAAAAGGGGAA
TTTCTAAAAACTGATGGCATTGCAAATGCTGCCCTCTATTTGGCTAGTGA
TGAATCAAGTTATGTGAGCGGGCAAAATCTTGTTGTGGATGGAGGATTCA
GCGTGGTGAATCCTACAGTTATGAGGGCTTACGGTCTTATCAAGTAATCA
ATTGGAGCTTTAATTTGTAGATAATGGGGGATGCCGTACTCTGCTGCGTA
CGTGTAAGAATGCATTCATTTT
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