FC930821

Overview
NameFC930821
Unique NameFC930821
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length672
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15221 contig Ccv1_Contig15221:1..672. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC930821 vs. ExPASy Swiss-Prot
Match: FABG_CHLMU (3-oxoacyl-[acyl-carrier-protein] reductase OS=Chlamydia muridarum GN=fabG PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.065e-15
Identity = 60/188 (31.91%), Postives = 95/188 (50.53%), Query Frame = 1
Query:   16 VDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVVVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLK---------TDGIANAALYLASDESSYVSGQNLVVDGGFS 552
            V   ++++G +D++ NNAGI   S   ++   + +   +I+ N    +       R ++  + G I+  +S        G   Y  +K GI+G  K L+ E+G   IRVNC++P  + T M+ KG  D            NLK E+LK          + IA AAL+LAS++SSY++GQ L VDGG +
Sbjct:   76 VQKFLAEYGTIDVVVNNAGITRDSL--LMRMSEEEWSSVIDTNLGSIYNVCSAVIRPMIKARSGAIVNISSIVGLRGSPGQTNYAAAKAGIIGFSKALSKEVGSKNIRVNCIAPGFIDTDMT-KGLSD------------NLKNEWLKGVPLGRVGTPEEIAMAALFLASNQSSYITGQVLSVDGGMA 248          
BLAST of FC930821 vs. ExPASy Swiss-Prot
Match: FABG_CHLTR (3-oxoacyl-[acyl-carrier-protein] reductase OS=Chlamydia trachomatis GN=fabG PE=1 SV=3)

HSP 1 Score: 81.6481 bits (200), Expect = 4.003e-15
Identity = 58/188 (30.85%), Postives = 91/188 (48.40%), Query Frame = 1
Query:   16 VDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVVVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLK---------TDGIANAALYLASDESSYVSGQNLVVDGGFS 552
            V   ++++  +D++ NNAGI   +   ++   + +   +IN N    +       R ++  + G I+  +S        G   Y  +K GI+G  K L+ E+G   IRVNC++P  + T M             + S   NLK E+LK          + IA AAL+LASD SSY++GQ L VDGG +
Sbjct:   76 VQNFLAEYNTIDVIVNNAGITRDAL--LMRMSEEEWSSVINTNLGSIYNVCSAVIRPMIKARSGAIINISSIVGLRGSPGQTNYAAAKAGIIGFSKALSKEVGSKNIRVNCIAPGFIDTDM-------------TKSLNDNLKNEWLKGVPLGRVGMPEEIAKAALFLASDGSSYITGQVLSVDGGMA 248          
BLAST of FC930821 vs. ExPASy Swiss-Prot
Match: CBR4_XENLA (Carbonyl reductase family member 4 OS=Xenopus laevis GN=cbr4 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.003e-15
Identity = 57/175 (32.57%), Postives = 91/175 (52.00%), Query Frame = 1
Query:   31 SKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVVVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGGFSV 555
            +  G +D + N+AGI   +   +L T   D+  L+++N +G     K A + ++ QQ G I+   S       +G   Y  SK G++G  K LA E+ +  IRVN V+P  + T M+        L E S+++M  L G F + + +A + L+L   ES Y++G  LVVDGG  +
Sbjct:   71 NNLGNIDYLVNSAGISRDAL--LLRTRSEDIMSLLSINLVGTIQTCKVALKGMIQQQGGSIVNIGSIVGHKGNIGQSIYGASKEGLIGFSKSLAKEVAKRNIRVNVVAPGFIRTDMTSD------LKEDSLNKMIPL-GRFGEPEEVAQSVLFLL--ESPYITGHVLVVDGGLQL 234          
BLAST of FC930821 vs. ExPASy Swiss-Prot
Match: FABG_BACSU (3-oxoacyl-[acyl-carrier-protein] reductase OS=Bacillus subtilis GN=fabG PE=3 SV=3)

HSP 1 Score: 81.2629 bits (199), Expect = 5.228e-15
Identity = 54/182 (29.67%), Postives = 93/182 (51.10%), Query Frame = 1
Query:    1 EVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVVVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGG 546
            +V N++   +S F  +DI+ NNAGI   +   I+   + + + +IN+N  G F   K   R ++ Q+ G I+  +S        G   Y  +K G++GL K  A EL    I VN ++P  ++T M+ K   D   ++  M +   L   F +   +++   +LAS+ + Y++GQ L +DGG
Sbjct:   68 DVQNMIKETLSVFSTIDILVNNAGITRDNL--IMRMKEDEWDDVININLKGVFNCTKAVTRQMMKQRSGRIINVSSIVGVSGNPGQANYVAAKAGVIGLTKSSAKELASRNITVNAIAPGFISTDMTDKLAKD---VQDEMLKQIPL-ARFGEPSDVSSVVTFLASEGARYMTGQTLHIDGG 243          
BLAST of FC930821 vs. ExPASy Swiss-Prot
Match: BUTA_STAES (Acetoin(diacetyl) reductase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=butA PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 5.228e-15
Identity = 60/192 (31.25%), Postives = 101/192 (52.60%), Query Frame = 1
Query:   13 LVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVVVPQQ-KGCILFTASACTEIAGLGS----PAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNL---------KGEFLKTDGIANAALYLASDESSYVSGQNLVVDGG 546
            LV  AV++FG+LD+M NNAG+   +   IL+  + +L +L N+N  G   G + AA   + Q+ KG I+   +AC+ IAG  S      Y+ +K+ +    +  A EL   GI VN   P    T M  +   +   ++ S+ ++G+           G + +   +AN   +LAS++S Y++GQ+++ DGG
Sbjct:   69 LVQFAVTEFGQLDVMVNNAGV--DAVTPILEIGEEELSKLFNINVFGTLFGIQAAANQFIKQKSKGKII---NACS-IAGHESYEVLGTYSATKHSVRSFTQTAAKELADKGITVNAYCPGVAKTEMWDRIDEEMVKLDDSL-EIGDAFEAFSSEIKLGRYQEPSDVANLVSFLASNDSDYITGQSILTDGG 253          
BLAST of FC930821 vs. ExPASy Swiss-Prot
Match: BUTA_STAEQ (Acetoin(diacetyl) reductase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=butA PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 5.228e-15
Identity = 60/192 (31.25%), Postives = 101/192 (52.60%), Query Frame = 1
Query:   13 LVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVVVPQQ-KGCILFTASACTEIAGLGS----PAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNL---------KGEFLKTDGIANAALYLASDESSYVSGQNLVVDGG 546
            LV  AV++FG+LD+M NNAG+   +   IL+  + +L +L N+N  G   G + AA   + Q+ KG I+   +AC+ IAG  S      Y+ +K+ +    +  A EL   GI VN   P    T M  +   +   ++ S+ ++G+           G + +   +AN   +LAS++S Y++GQ+++ DGG
Sbjct:   69 LVQFAVTEFGQLDVMVNNAGV--DAVTPILEIGEEELSKLFNINVFGTLFGIQAAANQFIKQKSKGKII---NACS-IAGHESYEVLGTYSATKHSVRSFTQTAAKELADKGITVNAYCPGVAKTEMWDRIDEEMVKLDDSL-EIGDAFEAFSSEIKLGRYQEPSDVANLVSFLASNDSDYITGQSILTDGG 253          
BLAST of FC930821 vs. ExPASy Swiss-Prot
Match: Y019_THEMA (Uncharacterized oxidoreductase TM_0019 OS=Thermotoga maritima GN=TM_0019 PE=3 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 8.918e-15
Identity = 56/189 (29.63%), Postives = 96/189 (50.79%), Query Frame = 1
Query:    4 VINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVVVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATG----MSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDE-SSYVSGQNLVVDGGFSV 555
            V N+V   V  +G +D++ NNA ++  S  SI + P  + ER+I VN  G ++ +++ A  ++ +  G I+  AS     +   +  Y+ SK G++ L   LA  L +Y IRV  +SP  + T      S++   D   I+      G +         IA+  ++LA DE + +++G N +VDGG +V
Sbjct:   68 VKNMVRKTVEIYGGVDVLVNNAAVM--SVKSIFERPLEEWERVIRVNLTGPYICSRYCAEEMIKRGGGVIINIASTRAFQSEPDTEPYSASKGGLVALTHSLAVSLSRYHIRVVSISPGWIETSEWKKKSLRKKPDLRPIDHEQHPAGRVGNPL----DIAHLCVFLADDEKAGFITGTNFIVDGGMTV 250          
BLAST of FC930821 vs. ExPASy Swiss-Prot
Match: LIMC_RHOER ((-)-trans-carveol dehydrogenase OS=Rhodococcus erythropolis GN=limC PE=1 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.165e-14
Identity = 64/197 (32.49%), Postives = 103/197 (52.28%), Query Frame = 1
Query:   16 VDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVVVP-----QQKGCILFTASACTEIAGLGSPA----YTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGV----DPAL-------IESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGG 546
            VD AVS  G+LDI+  NAGI    F S  D P +   ++I++N  G +    H A+V VP     ++ G I+ T+SA    AGL   A    Y+ +K+G++GL++ LA EL  + +RVN + P  + T M    G      P L        E + +    L   ++++  ++NA L+L S+++ Y++G  + VD G
Sbjct:   86 VDRAVSTLGRLDIVSANAGIASVPFLSH-DIPDNTWRQMIDINLTGVW----HTAKVAVPHILAGERGGSIVLTSSA----AGLKGYAQISHYSAAKHGVVGLMRSLALELAPHRVRVNSLHPTQVNTPMIQNEGTYRIFSPDLENPTREDFEIASTTTNALPIPWVESVDVSNALLFLVSEDARYITGAAIPVDAG 273          
BLAST of FC930821 vs. ExPASy Swiss-Prot
Match: DHRS4_HUMAN (Dehydrogenase/reductase SDR family member 4 OS=Homo sapiens GN=DHRS4 PE=1 SV=2)

HSP 1 Score: 80.1073 bits (196), Expect = 1.165e-14
Identity = 54/178 (30.34%), Postives = 90/178 (50.56%), Query Frame = 1
Query:   13 LVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVVVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGG 546
            LV TAV   G +DI+ +NA + +  FGSI+D  +   ++ +++N     L  K     +  +  G ++  +S        G   Y +SK  +LGL K LA EL    IRVNC++P  + T  S    +D    E SM +   ++    + +  A    +L S+++SY++G+ +VV GG
Sbjct:   81 LVATAVKLHGGIDILVSNAAV-NPFFGSIMDVTEEVWDKTLDINVKAPALMTKAVVPEMEKRGGGSVVIVSSIAAFSPSPGFSPYNVSKTALLGLTKTLAIELAPRNIRVNCLAPGLIKTSFSRMLWMDKEK-EESMKETLRIR-RLGEPEDCAGIVSFLCSEDASYITGETVVVGGG 255          
BLAST of FC930821 vs. ExPASy Swiss-Prot
Match: DHB8_RAT (Estradiol 17-beta-dehydrogenase 8 OS=Rattus norvegicus GN=Hsd17b8 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.165e-14
Identity = 54/166 (32.53%), Postives = 91/166 (54.82%), Query Frame = 1
Query:   52 IMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVVVPQQ-KGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGG 546
            ++ + AGI    F  +L   + D +R+I VN  G FL  + AA+ +V    +G I+  +S   ++  +G   Y  SK G++GL +  A ELG++GIR N V P  +AT M+ K    P  ++  ++ M  L G     + +A+   +LAS++S Y++G ++ V GG
Sbjct:   97 VVVSCAGITRDEF--LLHMSEEDWDRVIAVNLKGTFLVTQAAAQALVSSGGRGSIINISSIVGKVGNIGQTNYASSKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQK---MPEKVKDKVTAMIPL-GHMGDPEDVADVVAFLASEDSGYITGASVEVSGG 256          
The following BLAST results are available for this feature:
BLAST of FC930821 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 173
Match NameE-valueIdentityDescription
FABG_CHLMU3.065e-1531.913-oxoacyl-[acyl-carrier-protein] reductase OS=Chla... [more]
FABG_CHLTR4.003e-1530.853-oxoacyl-[acyl-carrier-protein] reductase OS=Chla... [more]
CBR4_XENLA4.003e-1532.57Carbonyl reductase family member 4 OS=Xenopus laev... [more]
FABG_BACSU5.228e-1529.673-oxoacyl-[acyl-carrier-protein] reductase OS=Baci... [more]
BUTA_STAES5.228e-1531.25Acetoin(diacetyl) reductase OS=Staphylococcus epid... [more]
BUTA_STAEQ5.228e-1531.25Acetoin(diacetyl) reductase OS=Staphylococcus epid... [more]
Y019_THEMA8.918e-1529.63Uncharacterized oxidoreductase TM_0019 OS=Thermoto... [more]
LIMC_RHOER1.165e-1432.49(-)-trans-carveol dehydrogenase OS=Rhodococcus ery... [more]
DHRS4_HUMAN1.165e-1430.34Dehydrogenase/reductase SDR family member 4 OS=Hom... [more]
DHB8_RAT1.165e-1432.53Estradiol 17-beta-dehydrogenase 8 OS=Rattus norveg... [more]

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Properties
Property NameValue
Genbank descriptionC34109D06EF PostHarvP1 Citrus clementina cDNA clone C34109D06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930821 ID=FC930821; Name=FC930821; organism=Citrus clementina; type=EST; length=672bp
GAAGTCATCAATCTCGTTGATACCGCCGTTTCTAAATTTGGAAAGCTCGA
TATCATGTACAACAATGCAGGAATTCTTGACCGCAGCTTTGGGAGCATTT
TGGACACTCCAAAGTCTGATCTAGAACGCTTAATTAATGTAAACACTATA
GGTGGTTTCTTAGGAGCCAAGCATGCTGCAAGAGTCGTGGTGCCACAGCA
AAAAGGTTGCATACTGTTTACAGCTAGTGCTTGTACAGAAATTGCAGGGC
TTGGCTCCCCTGCTTATACAATATCCAAATATGGGATTTTAGGACTAGTA
AAGTGCTTGGCAGCAGAGCTTGGACAGTATGGAATAAGAGTAAATTGCGT
CTCGCCTTATGGTTTGGCGACAGGAATGTCGATGAAAGGTGGGGTCGATC
CGGCTCTAATAGAATCATCAATGAGCCAGATGGGTAATCTAAAAGGGGAA
TTTCTAAAAACTGATGGCATTGCAAATGCTGCCCTCTATTTGGCTAGTGA
TGAATCAAGTTATGTGAGCGGGCAAAATCTTGTTGTGGATGGAGGATTCA
GCGTGGTGAATCCTACAGTTATGAGGGCTTACGGTCTTATCAAGTAATCA
ATTGGAGCTTTAATTTGTAGATAATGGGGGATGCCGTACTCTGCTGCGTA
CGTGTAAGAATGCATTCATTTT
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