FC930825
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC930825 vs. ExPASy Swiss-Prot
Match: LOX12_RABIT (Arachidonate 12-lipoxygenase, 12S-type OS=Oryctolagus cuniculus GN=ALOX12 PE=2 SV=3) HSP 1 Score: 68.1662 bits (165), Expect = 4.745e-11 Identity = 48/178 (26.97%), Postives = 75/178 (42.13%), Query Frame = 1 Query: 4 MEINGLARQALVNADGIIESSFSPGKYSMEFSSVAYDKQWRFDHEALPKDLISRGLAVEDPSAPHGLKLTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVESDEELQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYTYGGYFPNRPTTAR 537 +EIN AR LV+ GI + S G + P DL RGL L +E +A D L LW+ I ++V + YY V D ELQ+W EI +G + + + L++ +T ++ +G H++++ GQ + + PN P T R Sbjct: 398 LEINVRARNGLVSDFGIFDQIMSTGGGGHVQLLQQAGAFLTYRSFCPPDDLADRGL------------LGVESSFYAQDALRLWEIISRYVQGIMGLYYKTDEAVRDDLELQSWCREITEIGLQGAQKQGFPTSLQSVAQACHFVTMCIFTCTGQHSSIHLGQLDWFTWVPNAPCTMR 563
BLAST of FC930825 vs. ExPASy Swiss-Prot
Match: LOX15_PONAB (Arachidonate 15-lipoxygenase OS=Pongo abelii GN=ALOX15 PE=2 SV=3) HSP 1 Score: 67.781 bits (164), Expect = 6.198e-11 Identity = 49/178 (27.53%), Postives = 76/178 (42.70%), Query Frame = 1 Query: 4 MEINGLARQALVNADGIIESSFSPGKYSMEFSSVAYDKQWRFDHEALPKDLISRGLAVEDPSAPHGLKLTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVESDEELQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYTYGGYFPNRPTTAR 537 +EIN AR LV+ GI + S G + P DL RGL L ++ +A D L LW+ I ++V V+ +Y V+ D ELQ W EI +G + + L++ + +T ++ +G HA+V+ GQ + + PN P T R Sbjct: 397 LEINVRARTGLVSDMGIFDQIMSTGGGGHVQLLKQAGAFLTYSSFCPPDDLADRGL------------LGVKSSFYAQDALRLWEIIYRYVEGIVSLHYKTDVAVKDDPELQTWCREITEIGLQGAQDRGFPVSLQSRDQVCHFVTMCIFTCTGQHASVHLGQLDWYSWVPNAPCTMR 562
BLAST of FC930825 vs. ExPASy Swiss-Prot
Match: LOX12_PIG (Arachidonate 12-lipoxygenase, 12S-type OS=Sus scrofa GN=ALOX12 PE=1 SV=2) HSP 1 Score: 67.781 bits (164), Expect = 6.198e-11 Identity = 55/182 (30.22%), Postives = 82/182 (45.05%), Query Frame = 1 Query: 4 MEINGLARQALVNADGIIESSFSPGKYSMEFSSVAYDKQWRFDHEALPKDLISRGLAVEDPSAPHGLKLTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVESDEELQAW---WTEIRTVGHGDKKHEPWWPV-LKTPKDLIEIITTIVWVTSGHHAAVNFGQYTYGGYFPNRPTTAR 537 MEIN AR LV+ GI + S G + P DL RGL L +E +A D L LW+ I ++V V+ +Y V+ D ELQAW +TEI +G D+ +PV L++ + L +T ++ +G H++ + GQ + + PN P T R Sbjct: 398 MEINVRARNGLVSDLGIFDQVVSTGGGGHVELLRRAAALLTYSSFCPPDDLADRGL------------LGVESSFYAQDALRLWEVISRYVEGIVSLHYKTDESVKEDFELQAWCREFTEIGLLGAQDR----GFPVSLQSKEQLCHFVTMCIFTCTGQHSSNHLGQLDWYTWVPNAPCTMR 563
BLAST of FC930825 vs. ExPASy Swiss-Prot
Match: LOX15_HUMAN (Arachidonate 15-lipoxygenase OS=Homo sapiens GN=ALOX15 PE=1 SV=3) HSP 1 Score: 67.3958 bits (163), Expect = 8.094e-11 Identity = 49/178 (27.53%), Postives = 75/178 (42.13%), Query Frame = 1 Query: 4 MEINGLARQALVNADGIIESSFSPGKYSMEFSSVAYDKQWRFDHEALPKDLISRGLAVEDPSAPHGLKLTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVESDEELQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYTYGGYFPNRPTTAR 537 +EIN AR LV+ GI + S G + P DL RGL L ++ +A D L LW+ I ++V V+ +Y V+ D ELQ W EI +G + + L+ + +T ++ +G HA+V+ GQ + + PN P T R Sbjct: 397 LEINVRARTGLVSDMGIFDQIMSTGGGGHVQLLKQAGAFLTYSSFCPPDDLADRGL------------LGVKSSFYAQDALRLWEIIYRYVEGIVSLHYKTDVAVKDDPELQTWCREITEIGLQGAQDRGFPVSLQARDQVCHFVTMCIFTCTGQHASVHLGQLDWYSWVPNAPCTMR 562
BLAST of FC930825 vs. ExPASy Swiss-Prot
Match: LOX12_BOVIN (Arachidonate 12-lipoxygenase, 12S-type OS=Bos taurus GN=ALOX12 PE=2 SV=2) HSP 1 Score: 67.3958 bits (163), Expect = 8.094e-11 Identity = 47/178 (26.40%), Postives = 75/178 (42.13%), Query Frame = 1 Query: 4 MEINGLARQALVNADGIIESSFSPGKYSMEFSSVAYDKQWRFDHEALPKDLISRGLAVEDPSAPHGLKLTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVESDEELQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYTYGGYFPNRPTTAR 537 MEIN AR LV+ G+ + S G + P DL RGL L ++ +A D L LW+ + ++V V+ +Y V D ELQAW +I +G + + L++ L +T ++ +G H++ + GQ + + PN P T R Sbjct: 398 MEINIRARTGLVSDSGVFDQVVSTGGGGHVELLQRAGAFLTYSSFCPPDDLADRGL------------LGVKSSFYAQDALRLWEILSRYVEGIVSLHYKTDESVRDDIELQAWCRDITEIGLLGAQDRGFPVTLQSKDQLCHFVTMCIFTCTGQHSSTHLGQLDWYSWVPNAPCTMR 563 The following BLAST results are available for this feature:
BLAST of FC930825 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 55
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930825 ID=FC930825; Name=FC930825; organism=Citrus clementina; type=EST; length=685bpback to top |