FC930834

Overview
NameFC930834
Unique NameFC930834
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length700
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC930834 vs. ExPASy Swiss-Prot
Match: WRK13_ARATH (Probable WRKY transcription factor 13 OS=Arabidopsis thaliana GN=WRKY13 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.303e-11
Identity = 31/41 (75.61%), Postives = 34/41 (82.93%), Query Frame = 2 
Query:  578 REPRFAFMTKSEVDHLEDGYRWRKYGQKAVKDSPFPRSYYR 700
            REPRF F T SEVD L+DGYRWRKYGQK VK++  PRSYYR
Sbjct:  207 REPRFCFKTLSEVDVLDDGYRWRKYGQKVVKNTQHPRSYYR 247
[Close]
BLAST of FC930834 vs. ExPASy Swiss-Prot
Match: WRK75_ARATH (Probable WRKY transcription factor 75 OS=Arabidopsis thaliana GN=WRKY75 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.702e-11
Identity = 29/41 (70.73%), Postives = 37/41 (90.24%), Query Frame = 2 
Query:  578 REPRFAFMTKSEVDHLEDGYRWRKYGQKAVKDSPFPRSYYR 700
            ++ R+AF T+S+VD L+DGYRWRKYGQKAVK++ FPRSYYR
Sbjct:   51 KKQRYAFQTRSQVDILDDGYRWRKYGQKAVKNNKFPRSYYR 91
The following BLAST results are available for this feature:
BLAST of FC930834 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
WRK13_ARATH1.303e-1175.61Probable WRKY transcription factor 13 OS=Arabidops... [more]
WRK75_ARATH1.702e-1170.73Probable WRKY transcription factor 75 OS=Arabidops... [more]

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Properties
Property NameValue
Genbank descriptionC34109E08EF PostHarvP1 Citrus clementina cDNA clone C34109E08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930834 ID=FC930834; Name=FC930834; organism=Citrus clementina; type=EST; length=700bp
GAGCCTACTTCACACTTCAATAGCCTCACAGTAACTCTCTCTCTCTCTCT
CTCCCTTTCCATTTTGTTCTCTTTTCTTTTGTTTTTTTATGAAGATTAAG
AAGAATTTCAACTGAGGCATAATGGAGAGGAAGGAAGTTACAAAGACGAA
GAATCATAACAATATGGGATCATCACCATTTGCTGATCATCTTTCAACTG
GTTCTCAGCTTCGAGGCGTATTTGACTTGTACGAGGGAGAGAAGGGGTCA
TTAGGGTTTATGGAGTTACTGGGTGTTCAAGACTTTGGTTCTTCTTCTCC
TCCTTCTTCTTCTTTATTTGATATGGTACAGTTCCAGGCACAGAATCAGG
TTCCGTCTAAAGGAGCATCAGCATCTTCAACTGTCAATGTTACAAAGATT
GAATGTTCTGAGTTGTTGAATCAGCCGGCGACGCCTAACTCTTCCTCGAT
TTCATCTGCATCGAGTGAGGCTTTGAATGATGAACAAGTTAAAGTAGAAG
AGCATGTACATGATGAACAAAATCAACAAAAAACCAAGAAACAGTTGAAG
CCCAAGAAGACAAATCAGAAACGACAGAGAGAGCCGAGATTCGCGTTCAT
GACAAAGAGCGAGGTTGATCATCTGGAAGATGGATACCGATGGAGGAAGT
ACGGTCAGAAGGCCGTTAAGGACAGCCCCTTTCCTAGGAGTTACTATCGT
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