FC930835

Overview
NameFC930835
Unique NameFC930835
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length693
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930835 vs. ExPASy Swiss-Prot
Match: TRPD_BRAJA (Anthranilate phosphoribosyltransferase OS=Bradyrhizobium japonicum GN=trpD PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 7.672e-25
Identity = 67/157 (42.68%), Postives = 88/157 (56.05%), Query Frame = 2
Query:  221 LIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPCMKFV 688
            +I  + +   L+  EA ++ D +++ EA  + +   L+ LR +GET  EI G   AM      V    DAVDIVGTGGDG+ +VN+ST AS + +  G  VAK             DVL +LGV IDL PE V RCV E GIGFM +  +HP MK V
Sbjct:    7 IIGKVATGASLSRDEAASAFDAMMSGEATPSQMGGLLMALRVRGETVDEITGAVAAMRSKMLTVTAPPDAVDIVGTGGDGSGSVNVSTCASFIVSGAGVPVAKHGNRALSSRSGAADVLASLGVRIDLRPEQVGRCVRECGIGFMFAPAHHPAMKNV 163          
BLAST of FC930835 vs. ExPASy Swiss-Prot
Match: TRPD_PSEA7 (Anthranilate phosphoribosyltransferase OS=Pseudomonas aeruginosa (strain PA7) GN=trpD PE=3 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.002e-24
Identity = 63/154 (40.91%), Postives = 89/154 (57.79%), Query Frame = 2
Query:  233 LISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVE--GLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPCMKF 685
            +++++DLT  E QA +  ++     +A I AFL+ +R K ET  EIVG    M + A  V+   L   VD+VGTGGDGAN  N+S+ AS + AA G KVAK             D+LEA G+ ++L  E V RC+D  G+GFM +  +H  MK+
Sbjct:   10 IVNQLDLTTEEMQAVMRQIMTGRCTDAQIGAFLMGMRMKSETIDEIVGAVAVMRELADGVQLPTLKHVVDVVGTGGDGANIFNVSSAASFVVAAAGGKVAKHGNRAVSGKSGSADLLEAAGIYLELTSEQVARCIDTVGVGFMFAQVHHKAMKY 163          
BLAST of FC930835 vs. ExPASy Swiss-Prot
Match: TRPD_POLSJ (Anthranilate phosphoribosyltransferase OS=Polaromonas sp. (strain JS666 / ATCC BAA-500) GN=trpD PE=3 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.002e-24
Identity = 60/133 (45.11%), Postives = 83/133 (62.41%), Query Frame = 2
Query:  296 EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDA--VDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPCMKFV 688
            E    +++A +  LR K ET GEI   A+ M +++TKV        VDIVGTGGDG++T NIST +  +AAA GAKV+K             DV+EALG+ I+L PE + +C++EAG+GFM +  +HP MK V
Sbjct:   38 EMSPVMMAALITGLRVKKETIGEITAAAQVMREFSTKVHVADKTHLVDIVGTGGDGSHTFNISTCSMFVAAAAGAKVSKHGGRSVSSKSGSADVMEALGININLMPEAIAKCIEEAGVGFMFAPNHHPAMKNV 170          
BLAST of FC930835 vs. ExPASy Swiss-Prot
Match: TRPD_GEOSL (Anthranilate phosphoribosyltransferase OS=Geobacter sulfurreducens GN=trpD PE=3 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.002e-24
Identity = 69/166 (41.57%), Postives = 93/166 (56.02%), Query Frame = 2
Query:  233 LISRVDLTEAEAQASLDYLLNE-ADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKV---EGLGDA------------VDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPCMK 682
            ++ R+DLTEAE    +D +++  A  A I+AF+  LR KGET  EI G AR M   AT +   +G+ D             +D+VGTGGDG NT NIST  S + A+CG KVAK             DVLE+LGV +D+ PE V + + + GIGF+ +   H  MK
Sbjct:    9 VVERIDLTEAEMIEVMDQIMSGGATPAQIAAFITALRMKGETVEEITGAARVMRDRATPIRVGKGVLDIDRDDINIDQETILDVVGTGGDGTNTFNISTTVSFVVASCGVKVAKHGNRAVSSACGSADVLESLGVNLDVTPETVEQAIAKIGIGFLFAPALHGAMK 174          
BLAST of FC930835 vs. ExPASy Swiss-Prot
Match: TRPD_THICR (Anthranilate phosphoribosyltransferase OS=Thiomicrospira crunogena (strain XCL-2) GN=trpD PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.309e-24
Identity = 70/161 (43.48%), Postives = 94/161 (58.39%), Query Frame = 2
Query:  218 ELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDA---VDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPCMKFV 688
            + ++ L+++ DLT  + +  +  L++ +A  A I+A LV LRAKGET  EI   A  M   AT+V  L D    VD  GTGGDGANT NIST ++ +AAA GAKVAK             D+LE  GV ++L PE V  CV+  G+GFM +  +H  MK V
Sbjct:    5 DALEQLLNKHDLTAEQMEWVMQMLMSGQATSAQIAAILVALRAKGETVEEITAAASVMRSLATQVT-LTDKTHMVDTCGTGGDGANTFNISTASAFVAAAAGAKVAKHGSRSVSSQSGSADLLEKAGVNLNLTPEQVAECVETVGVGFMYAPAHHSAMKHV 164          
BLAST of FC930835 vs. ExPASy Swiss-Prot
Match: TRPD_RHORT (Anthranilate phosphoribosyltransferase OS=Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) GN=trpD PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.309e-24
Identity = 64/147 (43.54%), Postives = 85/147 (57.82%), Query Frame = 2
Query:  251 LTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPCMKFV 688
            L+EA+A  + + +++  A  A I  FL+ LR +GET  EI   AR M   A +++    A+DIVGTGGD A T NIST A+++ AACG  VAK             DVL ALGV +D D   V R + E GIGFM + ++H  MK V
Sbjct:   24 LSEADATRAFEAIMSGNATPAQIGGFLMALRVRGETVAEITAAARTMRDKAARIQAPAGAIDIVGTGGDCAGTYNISTAAALVTAACGVPVAKHGNRAASSKSGSADVLAALGVNLDADLALVERSIAEVGIGFMFAQRHHSAMKHV 170          
BLAST of FC930835 vs. ExPASy Swiss-Prot
Match: TRPD_PSEU2 (Anthranilate phosphoribosyltransferase OS=Pseudomonas syringae pv. syringae (strain B728a) GN=trpD PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.309e-24
Identity = 65/153 (42.48%), Postives = 87/153 (56.86%), Query Frame = 2
Query:  233 LISRVDLTEAE-AQASLDYLLNEADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVE--GLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPCMK 682
            +++++DLT  E +    + +  +  EA I AFL+ +R K ET  EIVG    M + A KVE   L   VDIVGTGGDGAN  N+ST ++ + AA G  VAK             D+LEA GV ++L P  V RC+D  GIGFM +  +H  MK
Sbjct:   14 VVNQLDLTTEEMSDVMREIMTGQCTEAQIGAFLMGMRMKSETIDEIVGAVSVMRELAGKVELKTLDGVVDIVGTGGDGANIFNVSTASAFVIAAAGCTVAKHGNRAVSGKSGSADLLEAAGVYLNLTPVQVARCIDSVGIGFMFAQSHHTAMK 166          
BLAST of FC930835 vs. ExPASy Swiss-Prot
Match: TRPD_PSEPU (Anthranilate phosphoribosyltransferase OS=Pseudomonas putida GN=trpD PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.309e-24
Identity = 64/153 (41.83%), Postives = 87/153 (56.86%), Query Frame = 2
Query:  233 LISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVE--GLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPCMK 682
            ++ ++DLT  E +  +  ++  +  EA I AFL+ +R K E+  EIVG    M + A KVE   L   VDIVGTGGDGAN  N+ST +S + AA G  VAK             D+LEA G+ ++L P  V RC+D  GIGFM +  +H  MK
Sbjct:   10 IVGQLDLTTEEMRDVMRQIMTGQCTEAQIGAFLMGMRMKSESIDEIVGAVSVMRELADKVELKSLDGVVDIVGTGGDGANIFNVSTASSFVLAAAGCTVAKHGNRAVSGKSGSADLLEAAGIYLNLTPTQVARCIDSLGIGFMFAQSHHSAMK 162          
BLAST of FC930835 vs. ExPASy Swiss-Prot
Match: TRPD_SALTO (Anthranilate phosphoribosyltransferase OS=Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440) GN=trpD PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.709e-24
Identity = 70/159 (44.03%), Postives = 91/159 (57.23%), Query Frame = 2
Query:  221 LIDCLISRVDLTEAE-AQASLDYLLNEADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKV----EGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPCMK 682
            L+  L+   +L  A+ A A  + +   A  A I+ F V LRAKGET  E+ GL  AM+ +A  V    E    AVD+VGTGGD A+TVNIST AS++ A  G +V K             DVLE LG+ +DL PE V  CV EAGIGF  + ++HP M+
Sbjct:    9 LLAALLRGDELCTADTAWAMGEIMSGSAGPAQIAGFAVALRAKGETPTELAGLVEAMLTHAVPVNLPAELRATAVDVVGTGGDLAHTVNISTMASLVVAGAGVRVVKHGNRAASSSCGTADVLEFLGLPLDLGPEAVATCVAEAGIGFCFAARFHPGMR 167          
BLAST of FC930835 vs. ExPASy Swiss-Prot
Match: TRPD_PSEU5 (Anthranilate phosphoribosyltransferase OS=Pseudomonas stutzeri (strain A1501) GN=trpD PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.709e-24
Identity = 65/158 (41.14%), Postives = 89/158 (56.33%), Query Frame = 2
Query:  218 ELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDA-VDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPCMKF 685
            E ++ ++ ++DLT  E QA +  ++  +  +A + AFL+ +R K ET  EIVG  + M + A  V    D  VD  GTGGDG N  N+ST AS + AA G KVAK             D+LEA GV +DL PE V R VD  G+GFM +  +H  MK+
Sbjct:    5 EALNRIVGQLDLTTEEMQAVMRQIMTGQCTDAQVGAFLMGMRMKSETIDEIVGAVQVMRELAAPVRFDTDKLVDTCGTGGDGMNIFNVSTAASFVVAAAGGKVAKHGNRAVSGKSGSADLLEAAGVFLDLTPEQVARSVDTVGVGFMFAPAHHGAMKY 162          
The following BLAST results are available for this feature:
BLAST of FC930835 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TRPD_BRAJA7.672e-2542.68Anthranilate phosphoribosyltransferase OS=Bradyrhi... [more]
TRPD_PSEA71.002e-2440.91Anthranilate phosphoribosyltransferase OS=Pseudomo... [more]
TRPD_POLSJ1.002e-2445.11Anthranilate phosphoribosyltransferase OS=Polaromo... [more]
TRPD_GEOSL1.002e-2441.57Anthranilate phosphoribosyltransferase OS=Geobacte... [more]
TRPD_THICR1.309e-2443.48Anthranilate phosphoribosyltransferase OS=Thiomicr... [more]
TRPD_RHORT1.309e-2443.54Anthranilate phosphoribosyltransferase OS=Rhodospi... [more]
TRPD_PSEU21.309e-2442.48Anthranilate phosphoribosyltransferase OS=Pseudomo... [more]
TRPD_PSEPU1.309e-2441.83Anthranilate phosphoribosyltransferase OS=Pseudomo... [more]
TRPD_SALTO1.709e-2444.03Anthranilate phosphoribosyltransferase OS=Salinisp... [more]
TRPD_PSEU51.709e-2441.14Anthranilate phosphoribosyltransferase OS=Pseudomo... [more]

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Properties
Property NameValue
Genbank descriptionC34109E09EF PostHarvP1 Citrus clementina cDNA clone C34109E09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930835 ID=FC930835; Name=FC930835; organism=Citrus clementina; type=EST; length=693bp
GAACACAATGACAATGAGAGCGTTGTTGAATTTAACTGCAGTTTCTTCCT
CTCCATTTAATAATAATCACCCAAATCACCGGCCTTCCTTACCGTCGCTT
CGAAACTGTGGATTTACGACTGCGGGTAATAATCCGAGATGCAGAGAATT
AACTGCTATTCAAACCCCTCAGCCGGCTGTTTCTGATAATACTCGTCCTC
TAACGCCCTGCTTTAATGAGTTGATCGATTGCTTGATAAGTCGAGTGGAT
TTAACGGAGGCGGAGGCTCAAGCTTCGCTGGATTATTTGTTGAATGAAGC
TGATGAGGCCTTGATTAGTGCTTTTCTTGTTTTGCTCAGAGCCAAAGGAG
AAACATTTGGAGAGATTGTGGGATTGGCCAGGGCGATGATAAAGTATGCT
ACGAAGGTGGAAGGGCTGGGTGATGCAGTTGACATTGTGGGTACAGGAGG
TGATGGTGCAAACACAGTGAACATTTCAACTGGTGCTTCAATTCTTGCTG
CAGCTTGTGGTGCAAAAGTTGCCAAGCAAGGGAGTCGGTCTAGTTCTTCT
GCATGTGGAAGTGCTGATGTGTTAGAAGCTTTGGGTGTCGTTATTGACTT
GGACCCAGAGGGTGTAAGAAGGTGTGTGGATGAGGCAGGAATTGGTTTCA
TGATGTCGACAAAGTATCACCCCTGCATGAAGTTTGTCAGGCC
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