FC930835

Overview
NameFC930835
Unique NameFC930835
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length693
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930835 vs. ExPASy Swiss-Prot
Match: TRPD_MYCVP (Anthranilate phosphoribosyltransferase OS=Mycobacterium vanbaalenii (strain DSM 7251 / PYR-1) GN=trpD PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.709e-24
Identity = 71/173 (41.04%), Postives = 98/173 (56.65%), Query Frame = 2
Query:  167 PQPAVSDNTRPLTPCFNELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKV--EGLGDA-VDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHP 673
            PQ A + N    TP +  ++  L +   L   +   ++D ++   A  A I+AF V ++ K  T  E+  LA  M+K+A +V  + +G A VDIVGTGGDGANTVN+ST A+I+ AA G  V K             D LEALG+ IDL P+ V RCV E GIGF  + ++HP
Sbjct:    6 PQLASAQNPSGDTPTWAMILGRLTTGQGLAPGQTAWAMDQIMTGTATPAQIAAFAVSMKMKRPTSAEVTELADIMLKHARRVPTDVIGTATVDIVGTGGDGANTVNLSTMAAIVVAAAGVPVVKHGNRAASSLSGGADTLEALGLRIDLGPDEVARCVAEVGIGFAFAPQFHP 178          
BLAST of FC930835 vs. ExPASy Swiss-Prot
Match: TRPD_PSEF5 (Anthranilate phosphoribosyltransferase OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=trpD PE=3 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 2.232e-24
Identity = 60/154 (38.96%), Postives = 89/154 (57.79%), Query Frame = 2
Query:  233 LISRVDLTEAEAQASL-DYLLNEADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVE--GLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPCMKF 685
            ++  +DL+  E ++ + + +  +  +A I AF++ +R K E+  EIVG   AM + A +VE   L   VD+VGTGGDGAN  N+ST +S + AA G  VAK             D+LEA G+ ++L P  V RC+D  GIGFM +  +H  MK+
Sbjct:   10 IVGHLDLSTEEMRSVMREIMTGQCTDAQIGAFMMAMRMKSESIDEIVGAVSAMRELADRVELKTLDGVVDVVGTGGDGANIFNVSTASSFVVAAAGCTVAKHGNRAVSGKSGSADLLEAAGIYLNLTPVQVARCIDNVGIGFMFAQSHHGAMKY 163          
BLAST of FC930835 vs. ExPASy Swiss-Prot
Match: TRPD_NITOC (Anthranilate phosphoribosyltransferase OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) GN=trpD PE=3 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 2.232e-24
Identity = 63/151 (41.72%), Postives = 89/151 (58.94%), Query Frame = 2
Query:  239 SRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGD-AVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPCMKF 685
            +R +LT  E  + ++ +++ +A  A I   L+ LR KGET  EI   AR M + ATKV   G   VD  GTGGDGANT NIST ++ + AA G +VAK             DVLEA G+ ++L PE + RC++E G+GF+ +  +H  +KF
Sbjct:   12 TRRNLTSEEMTSVMNLIMSGQATPAQIGGLLIGLRMKGETVEEIAAAARVMRELATKVTVTGPHLVDTCGTGGDGANTFNISTASAFVVAAAGGRVAKHGNRSVSSQCGSADVLEAAGIKLELTPEQIARCIEELGVGFLFAPCHHSAIKF 162          
BLAST of FC930835 vs. ExPASy Swiss-Prot
Match: TRPD_HALMA (Anthranilate phosphoribosyltransferase OS=Haloarcula marismortui GN=trpD PE=3 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 2.232e-24
Identity = 68/161 (42.24%), Postives = 89/161 (55.28%), Query Frame = 2
Query:  218 ELIDCLISRVDLTEAEAQASLDYLLNEADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKV----EGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPCMKFV 688
            E I+ +    DLT+AEA+A    +  +A EA I A L  LRAKGET  EI G A  M   A  +    EGL   VD  GTGGD  NT+N+ST ++I+AA  G  +AK             DVLE +GV I+ +P  V   ++  GIGFM++  +HP MK V
Sbjct:    3 EYIERVTDGDDLTQAEARAVATTVFEDATEAQIGALLTALRAKGETEAEIAGFAEGMRDAARTIRPDREGL---VDTCGTGGDDYNTINVSTTSAIVAAGAGVPIAKHGNYSVSSSSGSADVLEEVGVDIEAEPPDVEETIERDGIGFMLAPVFHPAMKAV 160          
BLAST of FC930835 vs. ExPASy Swiss-Prot
Match: TRPD_XANCP (Anthranilate phosphoribosyltransferase OS=Xanthomonas campestris pv. campestris GN=trpD PE=3 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 2.915e-24
Identity = 65/133 (48.87%), Postives = 80/133 (60.15%), Query Frame = 2
Query:  296 EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLG--DAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPCMKFV 688
            E  +A++SA L  LR K ET GEI G A  M +++ +VE       VDIVGTGGDG++T NIST A  +AAA GAKVAK             D LEALG VI+L PE V   + + GIGFM +  +HP MK V
Sbjct:   34 EVSDAMVSAILTGLRVKKETIGEIAGAATVMREFSRRVEVTDRRHMVDIVGTGGDGSHTFNISTCAMFVAAAGGAKVAKHGNRSVSSKSGSADALEALGAVIELQPEQVAASLAQTGIGFMYAPVHHPAMKVV 166          
BLAST of FC930835 vs. ExPASy Swiss-Prot
Match: TRPD_XANCB (Anthranilate phosphoribosyltransferase OS=Xanthomonas campestris pv. campestris (strain B100) GN=trpD PE=3 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 2.915e-24
Identity = 65/133 (48.87%), Postives = 80/133 (60.15%), Query Frame = 2
Query:  296 EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDA--VDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPCMKFV 688
            E  +A++SA L  LR K ET GEI G A  M +++ +VE       VDIVGTGGDG++T NIST A  +AAA GAKVAK             D LEALG VI+L PE V   + + GIGFM +  +HP MK V
Sbjct:   34 EVSDAMVSAILTGLRVKKETIGEIAGAATVMREFSRRVEVTDRCHMVDIVGTGGDGSHTFNISTCAMFVAAAGGAKVAKHGNRSVSSKSGSADALEALGAVIELQPEQVAASLAQTGIGFMYAPVHHPAMKVV 166          
BLAST of FC930835 vs. ExPASy Swiss-Prot
Match: TRPD_XANC8 (Anthranilate phosphoribosyltransferase OS=Xanthomonas campestris pv. campestris (strain 8004) GN=trpD PE=3 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 2.915e-24
Identity = 65/133 (48.87%), Postives = 80/133 (60.15%), Query Frame = 2
Query:  296 EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLG--DAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPCMKFV 688
            E  +A++SA L  LR K ET GEI G A  M +++ +VE       VDIVGTGGDG++T NIST A  +AAA GAKVAK             D LEALG VI+L PE V   + + GIGFM +  +HP MK V
Sbjct:   34 EVSDAMVSAILTGLRVKKETIGEIAGAATVMREFSRRVEVTDRRHMVDIVGTGGDGSHTFNISTCAMFVAAAGGAKVAKHGNRSVSSKSGSADALEALGAVIELQPEQVAASLAQTGIGFMYAPVHHPAMKVV 166          
BLAST of FC930835 vs. ExPASy Swiss-Prot
Match: TRPD_THEPX (Anthranilate phosphoribosyltransferase OS=Thermoanaerobacter sp. (strain X514) GN=trpD PE=3 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 3.808e-24
Identity = 66/159 (41.51%), Postives = 92/159 (57.86%), Query Frame = 2
Query:  218 ELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGD-AVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPCMKFV 688
            E I  ++S+ +L E EA A ++ +++  A  +LI   L+ LR KGE+  EI G A+AM   A K+E   D  +D  GTGGDG  T NIST  +I+A+A G KVAK             DVL  LG  I++ PE  +R ++E G+GF+ + KYH  MK V
Sbjct:    4 EAIKKIVSKENLEEREAYAVMNEIMSGNATPSLIGGILIGLRLKGESVEEITGFAKAMRDNAIKLELASDYVIDTCGTGGDGGKTFNISTAVAIIASAAGVKVAKHGNRAVSSKSGSADVLMELGFDIEMVPEKTKRLIEEKGMGFLFAPKYHVAMKNV 162          
BLAST of FC930835 vs. ExPASy Swiss-Prot
Match: TRPD_THEP3 (Anthranilate phosphoribosyltransferase OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) GN=trpD PE=3 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 3.808e-24
Identity = 66/159 (41.51%), Postives = 92/159 (57.86%), Query Frame = 2
Query:  218 ELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGD-AVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPCMKFV 688
            E I  ++S+ +L E EA A ++ +++  A  +LI   L+ LR KGE+  EI G A+AM   A K+E   D  +D  GTGGDG  T NIST  +I+A+A G KVAK             DVL  LG  I++ PE  +R ++E G+GF+ + KYH  MK V
Sbjct:    4 EAIKKIVSKENLEEREAYAVMNEIMSGNATPSLIGGILIGLRLKGESVEEITGFAKAMRDNAIKLELASDYVIDTCGTGGDGGKTFNISTAVAIIASAAGVKVAKHGNRAVSSKSGSADVLMELGFDIEMVPEKTKRLIEEKGMGFLFAPKYHVAMKNV 162          
BLAST of FC930835 vs. ExPASy Swiss-Prot
Match: TRPD_PSEFS (Anthranilate phosphoribosyltransferase OS=Pseudomonas fluorescens (strain SBW25) GN=trpD PE=3 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 3.808e-24
Identity = 61/153 (39.87%), Postives = 86/153 (56.21%), Query Frame = 2
Query:  233 LISRVDLTEAE-AQASLDYLLNEADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVE--GLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPCMK 682
            ++  +DL+ AE +    + +  +  +A I AF++ +R K E+  EIVG    M + A KVE   L   VD+VGTGGDGAN  N+ST +S + AA G  VAK             D+LEA G+ ++L P  V RC+D  GIGFM +  +H  MK
Sbjct:   10 IVGHLDLSTAEMSDVMREIMTGQCTDAQIGAFMMAMRMKSESIDEIVGAVSVMRELADKVELKTLDGVVDVVGTGGDGANIFNVSTASSFVVAAAGCTVAKHGNRAVSGKSGSADLLEAAGIYLNLTPVQVARCIDNVGIGFMFAQSHHGAMK 162          
The following BLAST results are available for this feature:
BLAST of FC930835 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TRPD_MYCVP1.709e-2441.04Anthranilate phosphoribosyltransferase OS=Mycobact... [more]
TRPD_PSEF52.232e-2438.96Anthranilate phosphoribosyltransferase OS=Pseudomo... [more]
TRPD_NITOC2.232e-2441.72Anthranilate phosphoribosyltransferase OS=Nitrosoc... [more]
TRPD_HALMA2.232e-2442.24Anthranilate phosphoribosyltransferase OS=Haloarcu... [more]
TRPD_XANCP2.915e-2448.87Anthranilate phosphoribosyltransferase OS=Xanthomo... [more]
TRPD_XANCB2.915e-2448.87Anthranilate phosphoribosyltransferase OS=Xanthomo... [more]
TRPD_XANC82.915e-2448.87Anthranilate phosphoribosyltransferase OS=Xanthomo... [more]
TRPD_THEPX3.808e-2441.51Anthranilate phosphoribosyltransferase OS=Thermoan... [more]
TRPD_THEP33.808e-2441.51Anthranilate phosphoribosyltransferase OS=Thermoan... [more]
TRPD_PSEFS3.808e-2439.87Anthranilate phosphoribosyltransferase OS=Pseudomo... [more]

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Properties
Property NameValue
Genbank descriptionC34109E09EF PostHarvP1 Citrus clementina cDNA clone C34109E09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930835 ID=FC930835; Name=FC930835; organism=Citrus clementina; type=EST; length=693bp
GAACACAATGACAATGAGAGCGTTGTTGAATTTAACTGCAGTTTCTTCCT
CTCCATTTAATAATAATCACCCAAATCACCGGCCTTCCTTACCGTCGCTT
CGAAACTGTGGATTTACGACTGCGGGTAATAATCCGAGATGCAGAGAATT
AACTGCTATTCAAACCCCTCAGCCGGCTGTTTCTGATAATACTCGTCCTC
TAACGCCCTGCTTTAATGAGTTGATCGATTGCTTGATAAGTCGAGTGGAT
TTAACGGAGGCGGAGGCTCAAGCTTCGCTGGATTATTTGTTGAATGAAGC
TGATGAGGCCTTGATTAGTGCTTTTCTTGTTTTGCTCAGAGCCAAAGGAG
AAACATTTGGAGAGATTGTGGGATTGGCCAGGGCGATGATAAAGTATGCT
ACGAAGGTGGAAGGGCTGGGTGATGCAGTTGACATTGTGGGTACAGGAGG
TGATGGTGCAAACACAGTGAACATTTCAACTGGTGCTTCAATTCTTGCTG
CAGCTTGTGGTGCAAAAGTTGCCAAGCAAGGGAGTCGGTCTAGTTCTTCT
GCATGTGGAAGTGCTGATGTGTTAGAAGCTTTGGGTGTCGTTATTGACTT
GGACCCAGAGGGTGTAAGAAGGTGTGTGGATGAGGCAGGAATTGGTTTCA
TGATGTCGACAAAGTATCACCCCTGCATGAAGTTTGTCAGGCC
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