FC930839

Overview
NameFC930839
Unique NameFC930839
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length710
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930839 vs. ExPASy Swiss-Prot
Match: ADH4_KLULA (Alcohol dehydrogenase 4, mitochondrial OS=Kluyveromyces lactis GN=ADH4 PE=3 SV=2)

HSP 1 Score: 73.559 bits (179), Expect = 1.208e-12
Identity = 44/122 (36.07%), Postives = 66/122 (54.10%), Query Frame = 3
Query:   75 TCKAVVCWGEGEPWKVEEIQVEPPKATEVRVKMLYASICHTDILSSKG-FPLPL-FPRVLGHEGVGMVESIGDEVKELKEGDIV-IPTFIGECRECENCTSEMANLCLKYPFTFHGLMPDGS 431
            T K V+ +  G   + +++ V  PKA E+ + + Y+ +CHTD+ + KG +PLP+  P V GHEG G+V + G+ VK  + GD   I    G C  CE C     + CL+   +  G   DGS
Sbjct:   33 TQKGVIFYENGGKLEYKDLPVPKPKANEILINVKYSGVCHTDLHAWKGDWPLPVKLPLVGGHEGAGIVVAKGENVKNFEIGDYAGIKWLNGSCMSCELCEQGYESNCLQADLS--GYTHDGS 152          
BLAST of FC930839 vs. ExPASy Swiss-Prot
Match: ADH1_KLULA (Alcohol dehydrogenase 1 OS=Kluyveromyces lactis GN=ADH1 PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.208e-12
Identity = 54/176 (30.68%), Postives = 80/176 (45.45%), Query Frame = 3
Query:   54 MSISPAMTCKAVVCWGEGEPWKVEEIQVEPPKATEVRVKMLYASICHTDILSSKG-FPLPL-FPRVLGHEGVGMVESIGDEVKELKEGDIV-IPTFIGECRECENCTSEMANLCLKYPFTFHGLMPDGSSRMSIRGQKLYHIFTCSTMTEYMVVDANYVVKVDPSIDLSLASFLSC 572
            M+ S   T K V+ +  G   + ++I V  PKA E+ + + Y+ +CHTD+ + KG +PLP   P V GHEG G+V ++G+ VK  K GD   I    G C  CE C     + C +   +  G   DGS                    +Y   DA    K+    DL+  + + C
Sbjct:    1 MAASIPETQKGVIFYENGGELQYKDIPVPKPKANELLINVKYSGVCHTDLHAWKGDWPLPTKLPLVGGHEGAGVVVAMGENVKGWKIGDFAGIKWLNGSCMSCEYCELSNESNCPEADLS--GYTHDGS------------------FQQYATADAVQAAKIPVGTDLAEVAPVLC 156          
BLAST of FC930839 vs. ExPASy Swiss-Prot
Match: CADH_MAIZE (Probable cinnamyl alcohol dehydrogenase OS=Zea mays GN=CAD PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.691e-12
Identity = 47/141 (33.33%), Postives = 67/141 (47.52%), Query Frame = 3
Query:  156 EVRVKMLYASICHTDILSSKG-FPLPLFPRVLGHEGVGMVESIGDEVKELKEGDIV-IPTFIGECRECENCTSEMANLCLKYPFTFHGLMPDGSSRMSIRGQKLYHIFTCSTMTEYMVVDANYVVKVDPSIDLSLASFLSC 572
            +V VK+LY  ICHTDI  +K       +P V GHE VG V  +G EV +   GD+V +   +G CREC  C + +   C K  ++++ +  DG               T       MVVD  +VVK+   +    A+ L C
Sbjct:   36 DVVVKVLYCGICHTDIHQAKNHLGASKYPMVPGHEVVGEVVEVGPEVAKYGVGDVVGVGVIVGCCRECSPCKANVEQYCNKKIWSYNDVYTDGRP-------------TQGGFASTMVVDQKFVVKIPAGLAPEQAAPLLC 163          
BLAST of FC930839 vs. ExPASy Swiss-Prot
Match: CADH9_ARATH (Probable cinnamyl alcohol dehydrogenase 9 OS=Arabidopsis thaliana GN=CAD9 PE=1 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 2.691e-12
Identity = 41/141 (29.08%), Postives = 70/141 (49.65%), Query Frame = 3
Query:  156 EVRVKMLYASICHTDILSSKG-FPLPLFPRVLGHEGVGMVESIGDEVKELKEGDIV-IPTFIGECRECENCTSEMANLCLKYPFTFHGLMPDGSSRMSIRGQKLYHIFTCSTMTEYMVVDANYVVKVDPSIDLSLASFLSC 572
            +V VK+L+  +CHTD+ + K  +    +P V GHE VG+   +G  V + KEGD V +    G C+ CE+C  ++ N C +  FT++ +  DG+                   +E +VVD  +V++   ++     + L C
Sbjct:   39 DVTVKILFCGVCHTDLHTIKNDWGYSYYPVVPGHEIVGIATKVGKNVTKFKEGDRVGVGVISGSCQSCESCDQDLENYCPQMSFTYNAIGSDGTKNY-------------GGYSENIVVDQRFVLRFPENLPSDSGAPLLC 166          
BLAST of FC930839 vs. ExPASy Swiss-Prot
Match: MTDH_PETCR (Mannitol dehydrogenase (Fragment) OS=Petroselinum crispum GN=ELI3 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.515e-12
Identity = 44/141 (31.21%), Postives = 68/141 (48.23%), Query Frame = 3
Query:  156 EVRVKMLYASICHTDILSSKG-FPLPLFPRVLGHEGVGMVESIGDEVKELKEGDIV-IPTFIGECRECENCTSEMANLCLKYPFTFHGLMPDGSSRMSIRGQKLYHIFTCSTMTEYMVVDANYVVKVDPSIDLSLASFLSC 572
            +VR K+LY  +CH+D+   K  + +  +P V GHE VG V  +G +V++ K GD V +   +G C  CENC  +  N C K   T+     DGS              T     + MV D ++V++   ++ L   + L C
Sbjct:   16 DVRFKVLYCGVCHSDLHMVKNEWGMTTYPIVPGHEIVGRVTEVGSKVEKFKVGDAVGVGCLVGSCLSCENCDDDSENNCAKQVQTYAFTNVDGS-------------ITYGGYADSMVADQHFVLRWPENLPLDSGAPLLC 143          
BLAST of FC930839 vs. ExPASy Swiss-Prot
Match: CADH_SACOF (Probable cinnamyl alcohol dehydrogenase OS=Saccharum officinarum GN=CAD PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.591e-12
Identity = 46/141 (32.62%), Postives = 68/141 (48.23%), Query Frame = 3
Query:  156 EVRVKMLYASICHTDILSSKG-FPLPLFPRVLGHEGVGMVESIGDEVKELKEGDIV-IPTFIGECRECENCTSEMANLCLKYPFTFHGLMPDGSSRMSIRGQKLYHIFTCSTMTEYMVVDANYVVKVDPSIDLSLASFLSC 572
            +V VK+LY  ICHTDI  +K       +P V GHE VG V  +G EV +   GD+V +   +G CREC+ C + +   C K  ++++ +  DG               T       MVVD  +V+K+   +    A+ L C
Sbjct:   36 DVVVKVLYCGICHTDIHQAKNHLGASKYPMVPGHEVVGEVVEVGPEVTKYGVGDVVGVGVIVGCCRECKPCKANVEQYCNKKIWSYNDVYTDGRP-------------TQGGFASTMVVDQKFVMKIPAGLAPEQAAPLLC 163          
BLAST of FC930839 vs. ExPASy Swiss-Prot
Match: CADH_LOLPR (Probable cinnamyl alcohol dehydrogenase OS=Lolium perenne PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 5.996e-12
Identity = 45/143 (31.47%), Postives = 68/143 (47.55%), Query Frame = 3
Query:  150 ATEVRVKMLYASICHTDILSSKG-FPLPLFPRVLGHEGVGMVESIGDEVKELKEGDIV-IPTFIGECRECENCTSEMANLCLKYPFTFHGLMPDGSSRMSIRGQKLYHIFTCSTMTEYMVVDANYVVKVDPSIDLSLASFLSC 572
            A +V +K+LY  ICHTD+  +K       +P V GHE VG V  +G EV +   GD+V +   +G CR+C  C + +   C K  ++++ +  DG               T       MVVD  +VVK+   +    A+ L C
Sbjct:   35 AEDVVLKVLYCGICHTDLHQTKNHLGASKYPMVPGHEVVGEVVEVGPEVSKYSVGDVVGVGVIVGCCRDCRPCKANVEQYCNKKIWSYNDVYTDGKP-------------TQGGFAGSMVVDQKFVVKIPAGLAPEQAAPLLC 164          
BLAST of FC930839 vs. ExPASy Swiss-Prot
Match: ADH_STAEQ (Alcohol dehydrogenase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=adh PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 5.996e-12
Identity = 50/155 (32.26%), Postives = 67/155 (43.23%), Query Frame = 3
Query:  120 VEEIQVEPPKATEVRVKMLYASICHTDILSSKGFPLPLFPRVLGHEGVGMVESIGDEVKELKEGDIV-IPTFIGECRECENCTSEMANLC---LKYPFTFHGLMPDGSSRMSIRGQKLYHIFTCSTMTEYMVVDANYVVKVDPSIDLSLASFLSC 572
            +EE ++   K  E  VK  Y  +CHTD+         +    LGHEG+G V  + D V  LK GD V I      C  CE CT+    LC   L   +T  G                        M E ++VDANY VKV  ++D + AS ++C
Sbjct:   14 IEEKRLRELKPGEALVKTEYCGVCHTDLHVKNADFGDVTGVTLGHEGIGRVIEVADNVDSLKVGDRVSIAWMYAACGNCEYCTTGRETLCRDVLNAGYTVDG-----------------------AMAEEVIVDANYAVKVPENLDPAAASSITC 145          
BLAST of FC930839 vs. ExPASy Swiss-Prot
Match: ADH3_BACST (Alcohol dehydrogenase OS=Bacillus stearothermophilus PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 5.996e-12
Identity = 53/167 (31.74%), Postives = 75/167 (44.91%), Query Frame = 3
Query:   81 KAVVCWGEGEPWKVEEIQVEPPKATEVRVKMLYASICHTDILSSKG-FPL-PLFPRVLGHEGVGMVESIGDEVKELKEGDIV-IPTFIGECRECENCTSEMANLCLKYPFTFHGLMPDGSSRMSIRGQKLYHIFTCSTMTEYMVVDANYVVKVDPSIDLSLASFLSC 572
            KA V     EP K++E++       EV V++    +CHTD+ ++ G +P+ P  P + GHEGVG+VE +G  V  LK GD V IP     C  C+ C S    LC        G   DG                     EY    A+YVVK+  ++    A+ + C
Sbjct:    2 KAAVVEQFKEPLKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAHGDWPVKPKLPLIPGHEGVGIVEEVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLCEHQKNA--GYSVDGG------------------YAEYCRAAADYVVKIPDNLSFEEAAPIFC 148          
BLAST of FC930839 vs. ExPASy Swiss-Prot
Match: CADH4_ORYSJ (Putative cinnamyl alcohol dehydrogenase 4 OS=Oryza sativa subsp. japonica GN=CAD4 PE=3 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 7.830e-12
Identity = 42/156 (26.92%), Postives = 78/156 (50.00%), Query Frame = 3
Query:  111 PWKVEEIQVEPPKATEVRVKMLYASICHTDILSSKG-FPLPLFPRVLGHEGVGMVESIGDEVKELKEGDIV-IPTFIGECRECENCTSEMANLCLKYPFTFHGLMPDGSSRMSIRGQKLYHIFTCSTMTEYMVVDANYVVKVDPSIDLSLASFLSC 572
            P+K    +V+   + +V +++ +  +C+ D++ ++  F   ++P V GHE  G+V  +G +VK  K GD V +  ++  C++CENC S + N C K   T++ +  DG+              T    + +++V   Y  K+     LS A+ L C
Sbjct:   24 PYKFNRREVQ---SEDVSLRITHCGVCYADVIWTRNMFNDSIYPLVPGHEIAGVVTEVGADVKGFKVGDHVGVGVYVNSCQDCENCNSSLENHCSKCVVTYNSVDSDGT-------------VTKGGYSSHILVHQRYCFKIPADYPLSKAAPLLC 163          
The following BLAST results are available for this feature:
BLAST of FC930839 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 163
Match NameE-valueIdentityDescription
ADH4_KLULA1.208e-1236.07Alcohol dehydrogenase 4, mitochondrial OS=Kluyvero... [more]
ADH1_KLULA1.208e-1230.68Alcohol dehydrogenase 1 OS=Kluyveromyces lactis GN... [more]
CADH_MAIZE2.691e-1233.33Probable cinnamyl alcohol dehydrogenase OS=Zea may... [more]
CADH9_ARATH2.691e-1229.08Probable cinnamyl alcohol dehydrogenase 9 OS=Arabi... [more]
MTDH_PETCR3.515e-1231.21Mannitol dehydrogenase (Fragment) OS=Petroselinum ... [more]
CADH_SACOF4.591e-1232.62Probable cinnamyl alcohol dehydrogenase OS=Sacchar... [more]
CADH_LOLPR5.996e-1231.47Probable cinnamyl alcohol dehydrogenase OS=Lolium ... [more]
ADH_STAEQ5.996e-1232.26Alcohol dehydrogenase OS=Staphylococcus epidermidi... [more]
ADH3_BACST5.996e-1231.74Alcohol dehydrogenase OS=Bacillus stearothermophil... [more]
CADH4_ORYSJ7.830e-1226.92Putative cinnamyl alcohol dehydrogenase 4 OS=Oryza... [more]

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Properties
Property NameValue
Genbank descriptionC34109F01EF PostHarvP1 Citrus clementina cDNA clone C34109F01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930839 ID=FC930839; Name=FC930839; organism=Citrus clementina; type=EST; length=710bp
GAGATTAGTTTGAACTTTGAAGTTGTAAAATCAACGAGTCTCCAGCAATA
AAGATGAGCATATCGCCAGCCATGACATGCAAAGCTGTTGTATGCTGGGG
TGAAGGAGAACCATGGAAAGTAGAAGAGATACAGGTGGAGCCTCCAAAAG
CAACAGAAGTTAGAGTCAAAATGCTTTATGCTAGCATTTGTCACACTGAT
ATCTTATCCTCTAAAGGGTTCCCATTGCCCCTTTTCCCTCGTGTTCTTGG
TCATGAAGGTGTCGGGATGGTGGAGAGTATCGGTGATGAAGTGAAAGAAT
TAAAGGAAGGAGATATTGTGATTCCAACATTTATTGGAGAATGTAGAGAA
TGTGAAAATTGCACATCAGAGATGGCCAATCTATGCCTAAAATATCCATT
CACCTTCCATGGGTTAATGCCGGATGGCAGTTCAAGAATGTCCATAAGAG
GCCAGAAATTGTATCACATATTTACATGCTCCACAATGACCGAATATATG
GTGGTTGATGCCAATTATGTTGTGAAAGTTGATCCAAGTATAGATCTTTC
ACTTGCTAGCTTCCTTTCATGTGGATACTCATCAGGATTTGGTGCAGCTT
GGAAGGAATTCAAAGTTGAAAAAGGATCAAGTGTTGCTGTTTTTGGCCTT
GGTGCTGTTGGATTAGGGGTTATGGATGGAGCCAGAATCCAGGGGCAGCT
AAAATATTGG
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