FC930839

Overview
NameFC930839
Unique NameFC930839
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length710
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930839 vs. ExPASy Swiss-Prot
Match: ADH1_PENAM (Alcohol dehydrogenase 1 OS=Pennisetum americanum GN=ADH1 PE=2 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 9.484e-42
Identity = 90/210 (42.86%), Postives = 122/210 (58.10%), Query Frame = 3
Query:   78 CKAVVCWGEGEPWKVEEIQVEPPKATEVRVKMLYASICHTDIL--SSKGFPLPLFPRVLGHEGVGMVESIGDEVKELKEGDIVIPTFIGECRECENCTSEMANLC-LKYPFTFHGLM-PDGSSRMSIRGQKLYHIFTCSTMTEYMVVDANYVVKVDPSIDLSLASFLSCGYSSGFGAAWKEFKVEKXXXXXXXXXXXXXXXXMDGARIQG 695
            CKA V W  G+P  +EE++V PP+A EVRVK+LY S+CHTD+    +KG   P+FPR+ GHE  G++ES+G+ V ++  GD V+P F GEC+EC +C S  +N+C L    T  G+M  DG SR SI G+ +YH    ST +EY V+    V K++P   L     LSCG S+G GA+    K  K                 +GARI G
Sbjct:   10 CKAAVAWEAGKPLSIEEVEVAPPQAMEVRVKILYTSLCHTDVYFWEAKG-QTPVFPRIFGHEAGGIIESVGEGVTDVAPGDHVLPVFTGECKECPHCKSAESNMCDLLRINTVRGVMIGDGKSRFSINGKPIYHFVGTSTFSEYTVMHVGCVAKINPEAPLDKVCVLSCGISTGLGASINVAKPPKGSTVAIFGLGAVGLAAAEGARIAG 218          
BLAST of FC930839 vs. ExPASy Swiss-Prot
Match: ADHX_HUMAN (Alcohol dehydrogenase class-3 OS=Homo sapiens GN=ADH5 PE=1 SV=4)

HSP 1 Score: 169.474 bits (428), Expect = 1.618e-41
Identity = 86/183 (46.99%), Postives = 114/183 (62.30%), Query Frame = 3
Query:   78 CKAVVCWGEGEPWKVEEIQVEPPKATEVRVKMLYASICHTDILSSKGF-PLPLFPRVLGHEGVGMVESIGDEVKELKEGDIVIPTFIGECRECENCTSEMANLCLKYPFT-FHGLMPDGSSRMSIRGQKLYHIFTCSTMTEYMVVDANYVVKVDPSIDLSLASFLSCGYSSGFGAAWKEFKVE 620
            CKA V W  G+P  +EEI+V PPKA EVR+K++  ++CHTD  +  G  P   FP +LGHEG G+VES+G+ V +LK GD VIP +I +C EC+ C +   NLC K   T   GLMPDG+SR + +G+ + H    ST +EY VV    V K+DP   L     L CG S+G+GAA    K+E
Sbjct:    8 CKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGCFPVILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGYGAAVNTAKLE 190          
BLAST of FC930839 vs. ExPASy Swiss-Prot
Match: ADHX_HORSE (Alcohol dehydrogenase class-3 OS=Equus caballus GN=ADH5 PE=1 SV=2)

HSP 1 Score: 169.474 bits (428), Expect = 1.618e-41
Identity = 86/183 (46.99%), Postives = 114/183 (62.30%), Query Frame = 3
Query:   78 CKAVVCWGEGEPWKVEEIQVEPPKATEVRVKMLYASICHTDILSSKGF-PLPLFPRVLGHEGVGMVESIGDEVKELKEGDIVIPTFIGECRECENCTSEMANLCLKYPFT-FHGLMPDGSSRMSIRGQKLYHIFTCSTMTEYMVVDANYVVKVDPSIDLSLASFLSCGYSSGFGAAWKEFKVE 620
            CKA V W  G+P  +EE++V PPKA EVR+K++  ++CHTD  +  G  P   FP +LGHEG G+VES+G+ V +LK GD VIP +I +C EC+ C +   NLC K   T   GLMPDG+SR + +G+ + H    ST +EY VV    V K+DP   L     L CG S+G+GAA    KVE
Sbjct:    8 CKAAVAWEAGKPVSIEEVEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGSFPVILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPQTNLCQKIRTTQGKGLMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGVSTGYGAAVNTAKVE 190          
BLAST of FC930839 vs. ExPASy Swiss-Prot
Match: ADH2_HORVU (Alcohol dehydrogenase 2 OS=Hordeum vulgare GN=ADH2 PE=3 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 1.618e-41
Identity = 87/209 (41.63%), Postives = 119/209 (56.94%), Query Frame = 3
Query:   78 CKAVVCWGEGEPWKVEEIQVEPPKATEVRVKMLYASICHTDILS-SKGFPLPLFPRVLGHEGVGMVESIGDEVKELKEGDIVIPTFIGECRECENCTSEMANLC--LKYPFTFHGLMPDGSSRMSIRGQKLYHIFTCSTMTEYMVVDANYVVKVDPSIDLSLASFLSCGYSSGFGAAWKEFKVEKXXXXXXXXXXXXXXXXMDGARIQG 695
            CKA V W  G+P  +EE++  PP+A EVR K+LY ++CHTD+         P+FPR+LGHE  G+VES+G+ V EL  GD V+P F GEC+EC +C SE +NLC  L+       ++ DG SR +I G+ ++H    ST +EY V+    V K+DP   L     LSCG S+G GA     K +K                M+GAR+ G
Sbjct:   10 CKAAVAWEAGKPLSMEEVEDAPPQAMEVRDKILYTALCHTDVYFWEANGQTPVFPRILGHEAGGIVESVGEGVTELVPGDHVLPVFTGECKECAHCMSEESNLCDLLRINVDRGVMIDDGQSRFTIDGKPIFHFLGTSTFSEYTVIHVGCVAKIDPEAPLDKVCLLSCGISTGLGATLNVTKPKKGMTVAIFGLGAVGLAAMEGARMSG 218          
BLAST of FC930839 vs. ExPASy Swiss-Prot
Match: ADHX_BOVIN (Alcohol dehydrogenase class-3 OS=Bos taurus GN=ADH5 PE=2 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 2.759e-41
Identity = 85/183 (46.45%), Postives = 114/183 (62.30%), Query Frame = 3
Query:   78 CKAVVCWGEGEPWKVEEIQVEPPKATEVRVKMLYASICHTDILSSKGF-PLPLFPRVLGHEGVGMVESIGDEVKELKEGDIVIPTFIGECRECENCTSEMANLCLKYPFT-FHGLMPDGSSRMSIRGQKLYHIFTCSTMTEYMVVDANYVVKVDPSIDLSLASFLSCGYSSGFGAAWKEFKVE 620
            CKA V W  G+P  +EE++V PPKA EVR+K++  ++CHTD  +  G  P   +P +LGHEG G+VES+G+ V +LK GD VIP +I +C EC+ C +   NLC K   T   GLMPDG+SR + +G+ + H    ST +EY VV    V K+DP   L     L CG S+G+GAA    KVE
Sbjct:    8 CKAAVAWEAGKPLSIEEVEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGNYPVILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGYGAALNAAKVE 190          
BLAST of FC930839 vs. ExPASy Swiss-Prot
Match: ADH7_HUMAN (Alcohol dehydrogenase class 4 mu/sigma chain OS=Homo sapiens GN=ADH7 PE=1 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 2.759e-41
Identity = 79/181 (43.65%), Postives = 114/181 (62.98%), Query Frame = 3
Query:   78 CKAVVCWGEGEPWKVEEIQVEPPKATEVRVKMLYASICHTDILSSKGFPLPLFPRVLGHEGVGMVESIGDEVKELKEGDIVIPTFIGECRECENCTSEMANLCLKYPFTFHGLMPDGSSRMSIRGQKLYHIFTCSTMTEYMVVDANYVVKVDPSIDLSLASFLSCGYSSGFGAAWKEFKVE 620
            CKA V W + +P+ +EEI+V PPK  EVR+K+L   IC TD    KG  +  FP ++GHE  G+VESIG+ V  +K GD VIP F+ +CREC  C +   NLC++   T  G++ DG++R + +G+ ++H    ST TEY VVD + V K+D +        + CG+S+G+GAA K  KV+
Sbjct:   10 CKAAVLWEQKQPFSIEEIEVAPPKTKEVRIKILATGICRTDDHVIKGTMVSKFPVIVGHEATGIVESIGEGVTTVKPGDKVIPLFLPQCRECNACRNPDGNLCIRSDITGRGVLADGTTRFTCKGKPVHHFMNTSTFTEYTVVDESSVAKIDDAAPPEKVCLIGCGFSTGYGAAVKTGKVK 190          
BLAST of FC930839 vs. ExPASy Swiss-Prot
Match: ADH_FRAAN (Alcohol dehydrogenase OS=Fragaria ananassa GN=ADH PE=3 SV=2)

HSP 1 Score: 168.318 bits (425), Expect = 3.604e-41
Identity = 90/210 (42.86%), Postives = 123/210 (58.57%), Query Frame = 3
Query:   78 CKAVVCWGEGEPWKVEEIQVEPPKATEVRVKMLYASICHTDIL--SSKGFPLPLFPRVLGHEGVGMVESIGDEVKELKEGDIVIPTFIGECRECENCTSEMANLC-LKYPFTFHGLM-PDGSSRMSIRGQKLYHIFTCSTMTEYMVVDANYVVKVDPSIDLSLASFLSCGYSSGFGAAWKEFKVEKXXXXXXXXXXXXXXXXMDGARIQG 695
            C+A V W  G+P  +EE++V PP+A  VRVK+LY S+CHTD+    +KG   PLFPR+ GHE  G+VES+G+ V +LK GD V+P F GEC+EC++C SE +N+C L    T  G+M  DG SR SI+G+ +YH    ST + Y V     + K++P   L     LSCG S+G GA     K +K                 +GAR+ G
Sbjct:   11 CRAAVAWEAGKPLVIEEVEVAPPQANVVRVKILYTSLCHTDVYFWEAKG-QNPLFPRIYGHEAGGIVESVGEGVTDLKAGDHVLPVFTGECKECDHCKSEESNMCDLLRINTDRGVMLNDGKSRFSIKGKPIYHFVGTSTFSVYTVTHVGCLAKINPQSPLDKVCILSCGISTGLGATLNVRKPKKGSTVAVFGLGAVGLAAAEGARMAG 219          
BLAST of FC930839 vs. ExPASy Swiss-Prot
Match: ADHL4_ARATH (Alcohol dehydrogenase-like 4 OS=Arabidopsis thaliana GN=At1g64710 PE=2 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 4.707e-41
Identity = 87/217 (40.09%), Postives = 126/217 (58.06%), Query Frame = 3
Query:   72 MTCKAVVCWGEGEPWKVEEIQVEPPKATEVRVKMLYASICHTDILSSKGF--PLPLFPRVLGHEGVGMVESIGDEVKELKEGDIVIPTFIGECRECENCTSEMANLCLKYPF--TFHGLMPDGSSRM--SIRGQKLYHIFTCSTMTEYMVVDANYVVKVDPSIDLSLASFLSCGYSSGFGAAWKEFKVEKXXXXXXXXXXXXXXXXMDGARIQGQLK 704
            +TCKA V WG GEP  +E+++V+PP+  EVR+++L+ SICHTD+ + KG       +PR+LGHE  G+VES+G+ V+E+  GD V+P F GEC +C  C  + ANLC ++        ++ DG +R   S   + +YH    ST +EY V+D+  V+KVDP   L   S LSCG S+G GAAW    ++                  +GAR +G  K
Sbjct:    8 ITCKAAVAWGAGEPLVMEDVKVDPPQRLEVRIRILFTSICHTDLSAWKGENEAQRAYPRILGHEAAGIVESVGEGVEEMMAGDHVLPIFTGECGDCRVCKRDGANLCERFRVDPMKKVMVTDGKTRFFTSKDNKPIYHFLNTSTFSEYTVIDSACVLKVDPLFPLEKISLLSCGVSTGVGAAWNVADIQPASTVAIFGLGAVGLAVAEGARARGASK 224          
BLAST of FC930839 vs. ExPASy Swiss-Prot
Match: ADH1_HORVU (Alcohol dehydrogenase 1 OS=Hordeum vulgare GN=ADH1 PE=2 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 4.707e-41
Identity = 90/210 (42.86%), Postives = 123/210 (58.57%), Query Frame = 3
Query:   78 CKAVVCWGEGEPWKVEEIQVEPPKATEVRVKMLYASICHTDIL--SSKGFPLPLFPRVLGHEGVGMVESIGDEVKELKEGDIVIPTFIGECRECENCTSEMANLC-LKYPFTFHGLM-PDGSSRMSIRGQKLYHIFTCSTMTEYMVVDANYVVKVDPSIDLSLASFLSCGYSSGFGAAWKEFKVEKXXXXXXXXXXXXXXXXMDGARIQG 695
            CKA V W  G+P  +EE++V PP+A EVRVK+L+ S+CHTD+    +KG  +P+FPR+ GHE  G+VES+G+ V ++  GD V+P F GEC+EC +C S  +N+C L    T  G+M  DG SR SI G+ +YH    ST +EY V+    V K++P   L     LSCG S+G GA+    K  K                 +GARI G
Sbjct:   10 CKAAVAWEAGKPLTMEEVEVAPPQAMEVRVKILFTSLCHTDVYFWEAKG-QIPMFPRIFGHEAGGIVESVGEGVTDVAPGDHVLPVFTGECKECPHCKSAESNMCDLLRINTDRGVMIGDGKSRFSIGGKPIYHFVGTSTFSEYTVMHVGCVAKINPEAPLDKVCVLSCGISTGLGASINVAKPPKGSTVAIFGLGAVGLAAAEGARIAG 218          
BLAST of FC930839 vs. ExPASy Swiss-Prot
Match: ADHX_OCTVU (Alcohol dehydrogenase class-3 OS=Octopus vulgaris PE=1 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 6.147e-41
Identity = 79/184 (42.93%), Postives = 117/184 (63.59%), Query Frame = 3
Query:   78 CKAVVCWGEGEPWKVEEIQVEPPKATEVRVKMLYASICHTDILSSKGF-PLPLFPRVLGHEGVGMVESIGDEVKELKEGDIVIPTFIGECRECENCTSEMANLCLKYPFT-FHGLMPDGSSRMSIRGQKLYHIFTCSTMTEYMVVDANYVVKVDPSIDLSLASFLSCGYSSGFGAAWKEFKVEK 623
            C A + W   +P  +EE++V PPK+ EVR+K+L++ +CHTD  + +G  P  +FP +LGHEG G+VESIG+ V  +K GD VIP ++ +C EC+ C +   NLC K   T   G+MPDG++R + +G++++H   CST +E+ VV    + KV+P   L     L CG S+G+GAA     VEK
Sbjct:   10 CMAAIAWEAKKPLSIEEVEVAPPKSGEVRIKILHSGVCHTDAYTLEGIDPEGIFPVILGHEGAGIVESIGEGVTSVKPGDTVIPLYVPQCYECKFCLNPKTNLCQKIRVTQGKGVMPDGTTRFTCKGKEVFHFMGCSTFSEFTVVAEISIAKVNPKAALDKVCLLGCGISTGYGAALNTAAVEK 193          
The following BLAST results are available for this feature:
BLAST of FC930839 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 163
Match NameE-valueIdentityDescription
ADH1_PENAM9.484e-4242.86Alcohol dehydrogenase 1 OS=Pennisetum americanum G... [more]
ADHX_HUMAN1.618e-4146.99Alcohol dehydrogenase class-3 OS=Homo sapiens GN=A... [more]
ADHX_HORSE1.618e-4146.99Alcohol dehydrogenase class-3 OS=Equus caballus GN... [more]
ADH2_HORVU1.618e-4141.63Alcohol dehydrogenase 2 OS=Hordeum vulgare GN=ADH2... [more]
ADHX_BOVIN2.759e-4146.45Alcohol dehydrogenase class-3 OS=Bos taurus GN=ADH... [more]
ADH7_HUMAN2.759e-4143.65Alcohol dehydrogenase class 4 mu/sigma chain OS=Ho... [more]
ADH_FRAAN3.604e-4142.86Alcohol dehydrogenase OS=Fragaria ananassa GN=ADH ... [more]
ADHL4_ARATH4.707e-4140.09Alcohol dehydrogenase-like 4 OS=Arabidopsis thalia... [more]
ADH1_HORVU4.707e-4142.86Alcohol dehydrogenase 1 OS=Hordeum vulgare GN=ADH1... [more]
ADHX_OCTVU6.147e-4142.93Alcohol dehydrogenase class-3 OS=Octopus vulgaris ... [more]

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Properties
Property NameValue
Genbank descriptionC34109F01EF PostHarvP1 Citrus clementina cDNA clone C34109F01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930839 ID=FC930839; Name=FC930839; organism=Citrus clementina; type=EST; length=710bp
GAGATTAGTTTGAACTTTGAAGTTGTAAAATCAACGAGTCTCCAGCAATA
AAGATGAGCATATCGCCAGCCATGACATGCAAAGCTGTTGTATGCTGGGG
TGAAGGAGAACCATGGAAAGTAGAAGAGATACAGGTGGAGCCTCCAAAAG
CAACAGAAGTTAGAGTCAAAATGCTTTATGCTAGCATTTGTCACACTGAT
ATCTTATCCTCTAAAGGGTTCCCATTGCCCCTTTTCCCTCGTGTTCTTGG
TCATGAAGGTGTCGGGATGGTGGAGAGTATCGGTGATGAAGTGAAAGAAT
TAAAGGAAGGAGATATTGTGATTCCAACATTTATTGGAGAATGTAGAGAA
TGTGAAAATTGCACATCAGAGATGGCCAATCTATGCCTAAAATATCCATT
CACCTTCCATGGGTTAATGCCGGATGGCAGTTCAAGAATGTCCATAAGAG
GCCAGAAATTGTATCACATATTTACATGCTCCACAATGACCGAATATATG
GTGGTTGATGCCAATTATGTTGTGAAAGTTGATCCAAGTATAGATCTTTC
ACTTGCTAGCTTCCTTTCATGTGGATACTCATCAGGATTTGGTGCAGCTT
GGAAGGAATTCAAAGTTGAAAAAGGATCAAGTGTTGCTGTTTTTGGCCTT
GGTGCTGTTGGATTAGGGGTTATGGATGGAGCCAGAATCCAGGGGCAGCT
AAAATATTGG
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