FC930839

Overview
NameFC930839
Unique NameFC930839
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length710
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930839 vs. ExPASy Swiss-Prot
Match: ADH1_PETHY (Alcohol dehydrogenase 1 OS=Petunia hybrida GN=ADH1 PE=3 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 8.028e-41
Identity = 90/210 (42.86%), Postives = 121/210 (57.62%), Query Frame = 3
Query:   78 CKAVVCWGEGEPWKVEEIQVEPPKATEVRVKMLYASICHTDIL--SSKGFPLPLFPRVLGHEGVGMVESIGDEVKELKEGDIVIPTFIGECRECENCTSEMANLC-LKYPFTFHGLM-PDGSSRMSIRGQKLYHIFTCSTMTEYMVVDANYVVKVDPSIDLSLASFLSCGYSSGFGAAWKEFKVEKXXXXXXXXXXXXXXXXMDGARIQG 695
            CKA V W  G+P  +EE++V PP+  EVR+K+L+ S+CHTD+    +KG   PLFPR+ GHE  G+VES+G+ V +LK GD V+P F GEC++C +C SE +N+C L    T  G+M  DG +R S  G+ +YH    ST +EY V  +  V K+DP   L     LSCG S+G GA     K  K                 +GARI G
Sbjct:   12 CKAAVAWEAGKPLVIEEVEVAPPQKMEVRLKILFTSLCHTDVYFWEAKG-QTPLFPRIFGHEAGGIVESVGEGVTDLKPGDHVLPVFTGECQQCRHCKSEESNMCDLLRINTDRGVMIHDGQTRFSKDGKPIYHFVGTSTFSEYTVCHSGCVTKIDPQAPLDKVCVLSCGISTGLGATLNVAKPTKGSTVAIFGLGAVGLAAAEGARIAG 220          
BLAST of FC930839 vs. ExPASy Swiss-Prot
Match: ADH1_ORYSJ (Alcohol dehydrogenase 1 OS=Oryza sativa subsp. japonica GN=ADH1 PE=2 SV=2)

HSP 1 Score: 166.392 bits (420), Expect = 1.369e-40
Identity = 90/210 (42.86%), Postives = 121/210 (57.62%), Query Frame = 3
Query:   78 CKAVVCWGEGEPWKVEEIQVEPPKATEVRVKMLYASICHTDIL--SSKGFPLPLFPRVLGHEGVGMVESIGDEVKELKEGDIVIPTFIGECRECENCTSEMANLC-LKYPFTFHGLM-PDGSSRMSIRGQKLYHIFTCSTMTEYMVVDANYVVKVDPSIDLSLASFLSCGYSSGFGAAWKEFKVEKXXXXXXXXXXXXXXXXMDGARIQG 695
            CKA V W   +P  +EE++V PP+A EVRVK+L+ S+CHTD+    +KG   P+FPR+ GHE  G+VES+G+ V +L  GD V+P F GEC+EC +C S  +N+C L    T  G+M  DG SR SI G+ +YH    ST +EY V+    V K++P+  L     LSCG S+G GA     K  K                 +GARI G
Sbjct:   10 CKAAVAWEAAKPLVIEEVEVAPPQAMEVRVKILFTSLCHTDVYFWEAKG-QTPVFPRIFGHEAGGIVESVGEGVTDLAPGDHVLPVFTGECKECAHCKSAESNMCDLLRINTDRGVMIGDGKSRFSINGKPIYHFVGTSTFSEYTVMHVGCVAKINPAAPLDKVCVLSCGISTGLGATINVAKPPKGSTVAIFGLGAVGLAAAEGARIAG 218          
BLAST of FC930839 vs. ExPASy Swiss-Prot
Match: ADH1_ORYSI (Alcohol dehydrogenase 1 OS=Oryza sativa subsp. indica GN=ADH1 PE=2 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 1.369e-40
Identity = 90/210 (42.86%), Postives = 121/210 (57.62%), Query Frame = 3
Query:   78 CKAVVCWGEGEPWKVEEIQVEPPKATEVRVKMLYASICHTDIL--SSKGFPLPLFPRVLGHEGVGMVESIGDEVKELKEGDIVIPTFIGECRECENCTSEMANLC-LKYPFTFHGLM-PDGSSRMSIRGQKLYHIFTCSTMTEYMVVDANYVVKVDPSIDLSLASFLSCGYSSGFGAAWKEFKVEKXXXXXXXXXXXXXXXXMDGARIQG 695
            CKA V W   +P  +EE++V PP+A EVRVK+L+ S+CHTD+    +KG   P+FPR+ GHE  G+VES+G+ V +L  GD V+P F GEC+EC +C S  +N+C L    T  G+M  DG SR SI G+ +YH    ST +EY V+    V K++P+  L     LSCG S+G GA     K  K                 +GARI G
Sbjct:   10 CKAAVAWEAAKPLVIEEVEVAPPQAMEVRVKILFTSLCHTDVYFWEAKG-QTPVFPRIFGHEAGGIVESVGEGVTDLAPGDHVLPVFTGECKECAHCKSAESNMCDLLRINTDRGVMIGDGKSRFSINGKPIYHFVGTSTFSEYTVMHVGCVAKINPAAPLDKVCVLSCGISTGLGATINVAKPPKGSTVAIFGLGAVGLAAAEGARIAG 218          
BLAST of FC930839 vs. ExPASy Swiss-Prot
Match: ADHX_UROHA (Alcohol dehydrogenase class-3 OS=Uromastyx hardwickii PE=1 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 1.789e-40
Identity = 85/188 (45.21%), Postives = 116/188 (61.70%), Query Frame = 3
Query:   63 SPAMTCKAVVCWGEGEPWKVEEIQVEPPKATEVRVKMLYASICHTDILSSKGF-PLPLFPRVLGHEGVGMVESIGDEVKELKEGDIVIPTFIGECRECENCTSEMANLCLKYPFT-FHGLMPDGSSRMSIRGQKLYHIFTCSTMTEYMVVDANYVVKVDPSIDLSLASFLSCGYSSGFGAAWKEFKVE 620
            S  + CKA V W  G+P  +EEI+V PPKA EVRVK++  ++CHTD  +  G  P   FP +LGHEG G+VES+G+ V + K GD VIP +I +C EC+ C +   NLC K   T   G+MPDG+SR + +G+++ H    ST +EY VV    + K++ S  L     L CG S+G+GAA    KVE
Sbjct:    2 SGVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRVKIIATAVCHTDAYTLSGADPEGSFPVILGHEGAGIVESVGEGVTKFKPGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGVMPDGTSRFTCKGKQVLHFMGTSTFSEYTVVADISLTKINASAPLDKVCLLGCGVSTGYGAALNTAKVE 189          
BLAST of FC930839 vs. ExPASy Swiss-Prot
Match: ADHL1_ARATH (Alcohol dehydrogenase-like 1 OS=Arabidopsis thaliana GN=At1g22430 PE=2 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 1.789e-40
Identity = 89/219 (40.64%), Postives = 126/219 (57.53%), Query Frame = 3
Query:   72 MTCKAVVCWGEGEPWKVEEIQVEPPKATEVRVKMLYASICHTDILSSK-GF-PLPLFPRVLGHEGVGMVESIGDEVKELKEGDIVIPTFIGECRECENCTSEMANLCLKYPFTF------HGLMPDGSSRMSIRGQKLYHIFTCSTMTEYMVVDANYVVKVDPSIDLSLASFLSCGYSSGFGAAWKEFKVEKXXXXXXXXXXXXXXXXMDGARIQGQLK 704
            +TCKA +C   GE   +E+I V+PP+A EVR+K+L  S+CHTD+   K  F P+  FPR+LGHE VG+VESIG+ V   K+GD+V+P F   C EC++C S   N C +Y   F      +G+    S      G+ ++H    S+ +EY VVD  ++VK+ P I +  A+ LSCG S+G GAAWK   VE+                 +GAR++G  K
Sbjct:   14 ITCKAAICRKAGEALVIEDIHVDPPQAYEVRIKILCTSLCHTDLTFWKLSFGPISRFPRILGHEAVGVVESIGENVDGFKQGDVVLPVFHPYCEECKDCKSSKTNWCDRYAEDFISNTRRYGM---ASRFKDSSGEVIHHFLFVSSFSEYTVVDIAHLVKISPEIPVDKAALLSCGVSTGIGAAWKVANVEEGSTIAIFGLGAVGLAVAEGARLRGAAK 229          
BLAST of FC930839 vs. ExPASy Swiss-Prot
Match: ADHH_GADMO (Alcohol dehydrogenase class-3 chain H OS=Gadus morhua PE=1 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 1.789e-40
Identity = 82/183 (44.81%), Postives = 112/183 (61.20%), Query Frame = 3
Query:   78 CKAVVCWGEGEPWKVEEIQVEPPKATEVRVKMLYASICHTDILSSKGF-PLPLFPRVLGHEGVGMVESIGDEVKELKEGDIVIPTFIGECRECENCTSEMANLCLKYPFT-FHGLMPDGSSRMSIRGQKLYHIFTCSTMTEYMVVDANYVVKVDPSIDLSLASFLSCGYSSGFGAAWKEFKVE 620
            CKA V W  G+P  +EE++V PP+A EVR+K++   +CHTD  +  G  P   FP +LGHEG G+VES+G+ V + K GD VIP ++ +C EC+ C +   NLC K   T   GLMPD +SR + +G++L+H    ST +EY VV    +  VDP   L     L CG S+G+GAA    KVE
Sbjct:    9 CKAAVAWEAGKPLSLEEVEVAPPRAGEVRIKVVATGVCHTDAYTLSGSDPEGAFPVILGHEGAGLVESVGEGVTKFKAGDTVIPLYVPQCGECKFCKNPKTNLCQKIRVTQGRGLMPDNTSRFTCKGKQLFHFMGTSTFSEYTVVADISLANVDPKAPLDKVCLLGCGISTGYGAALNTAKVE 191          
BLAST of FC930839 vs. ExPASy Swiss-Prot
Match: ADH1_PEA (Alcohol dehydrogenase 1 OS=Pisum sativum PE=3 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 1.789e-40
Identity = 90/217 (41.47%), Postives = 123/217 (56.68%), Query Frame = 3
Query:   57 SISPAMTCKAVVCWGEGEPWKVEEIQVEPPKATEVRVKMLYASICHTDIL--SSKGFPLPLFPRVLGHEGVGMVESIGDEVKELKEGDIVIPTFIGECRECENCTSEMANLC-LKYPFTFHGLM-PDGSSRMSIRGQKLYHIFTCSTMTEYMVVDANYVVKVDPSIDLSLASFLSCGYSSGFGAAWKEFKVEKXXXXXXXXXXXXXXXXMDGARIQG 695
            ++   + C+A V W  G+P  +EE++V PP+A EVR+K+L+ S+CHTD+    +KG   PLFPR+ GHE  G+VES+G+ V  LK GD  +P F GEC EC +C SE +N+C L    T  G+M  D  SR SI+GQ ++H    ST +EY VV A  V K++P   L     LSCG  +G GA     K +                  +GARI G
Sbjct:    4 TVGQIIKCRAAVAWEAGKPLVIEEVEVAPPQAGEVRLKILFTSLCHTDVYFWEAKG-QTPLFPRIFGHEAGGIVESVGEGVTHLKPGDHALPVFTGECGECPHCKSEESNMCDLLRINTDRGVMLNDNKSRFSIKGQPVHHFVGTSTFSEYTVVHAGCVAKINPDAPLDKVCILSCGICTGLGATINVAKPKPGSSVAIFGLGAVGLAAAEGARISG 219          
BLAST of FC930839 vs. ExPASy Swiss-Prot
Match: ADH1_NAJNA (Alcohol dehydrogenase 1 OS=Naja naja PE=1 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 2.336e-40
Identity = 84/183 (45.90%), Postives = 114/183 (62.30%), Query Frame = 3
Query:   78 CKAVVCWGEGEPWKVEEIQVEPPKATEVRVKMLYASICHTDI-LSSKGFPLPLFPRVLGHEGVGMVESIGDEVKELKEGDIVIPTFIGECRECENCTSEMANLCLKYPFTF-HGLMPDGSSRMSIRGQKLYHIFTCSTMTEYMVVDANYVVKVDPSIDLSLASFLSCGYSSGFGAAWKEFKVE 620
            CKA + W   +P  +E+I+V PPKA EVR+K+L   +C +D  + S  F +PL P VLGHE  G+VES+G+ V  +K GD VIP F  +C +C  C S   NLC         GLMPDG+SR + +G+ ++H  + ST TEY VV  N VVK+DPS  L     + CG+S+G+GAA +  KVE
Sbjct:    9 CKAAIAWELNKPLSIEQIEVAPPKAHEVRIKILATGVCRSDEHVISGAFRMPL-PMVLGHEAAGVVESVGEGVTCVKPGDKVIPLFAPQCGKCRACQSPKGNLCTSNDLNSGSGLMPDGTSRFTCKGKSIHHFISTSTFTEYTVVHENSVVKIDPSAPLEKVCLIGCGFSTGYGAAMQTAKVE 190          
BLAST of FC930839 vs. ExPASy Swiss-Prot
Match: FADH_YEAST (S-(hydroxymethyl)glutathione dehydrogenase OS=Saccharomyces cerevisiae GN=SFA1 PE=1 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 3.984e-40
Identity = 91/219 (41.55%), Postives = 125/219 (57.08%), Query Frame = 3
Query:   57 SISPAMTCKAVVCWGEGEPWKVEEIQVEPPKATEVRVKMLYASICHTDILSSKGF-PLPLFPRVLGHEGVGMVESIGDEVKELKEGDIVIPTFIGECRECENCTSEMANLCLKYPFT-FHGLMPDGSSRM-SIRGQKLYHIFTCSTMTEYMVVDANYVVKVDPSIDLSLASFLSCGYSSGFGAAWKEFKVEKXXXXXXXXXXXXXXXXMDGARIQGQLK 704
            ++   + C A V +   +P  VEEI V+ PKA EVR+K+ Y ++CHTD  +  G  P  LFP VLGHEG G+VES+GD+V  +K GD VI  +  EC +C+ CTS   NLC     T   G+MPDG++R  + +G+ +YH   CST +EY VV    VV +DP   L  A  L CG ++GFGAA K   V+K                + GA+++G  K
Sbjct:    5 TVGKPIKCIAAVAYDAKKPLSVEEITVDAPKAHEVRIKIEYTAVCHTDAYTLSGSDPEGLFPCVLGHEGAGIVESVGDDVITVKPGDHVIALYTAECGKCKFCTSGKTNLCGAVRATQGKGVMPDGTTRFHNAKGEDIYHFMGCSTFSEYTVVADVSVVAIDPKAPLDAACLLGCGVTTGFGAALKTANVQKGDTVAVFGCGTVGLSVIQGAKLRGASK 223          
BLAST of FC930839 vs. ExPASy Swiss-Prot
Match: ADHL5_ARATH (Alcohol dehydrogenase-like 5 OS=Arabidopsis thaliana GN=At4g22110 PE=2 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 3.984e-40
Identity = 88/213 (41.31%), Postives = 122/213 (57.28%), Query Frame = 3
Query:   78 CKAVVCWGEGEPWKVEEIQVEPPKATEVRVKMLYASICHTDILSSK--GFPLPLFPRVLGHEGVGMVESIGDEVKELKEGDIVIPTFIGECRECENCTSEMANLCLKYPFTFHGLMPDGSSRMSIR-----GQKLYHIFTCSTMTEYMVVDANYVVKVDPSIDLSLASFLSCGYSSGFGAAWKEFKVEKXXXXXXXXXXXXXXXXMDGARIQG 695
            CKA V    GE   +EEI V+PP+A EVR+K++  S+CHTD+  SK    PL  FPR+LGHE VG++ESIG+ V   ++GD+V+P F   C EC +C S  +N C ++   F  L       M+ R     G+ +YH    S+ +EY VVD  ++VK+ P I +  A+ LSCG S+G GAAWK   VEK                 +GAR++G
Sbjct:   17 CKAAVSRKPGEALVIEEIHVDPPQAYEVRIKIICTSLCHTDVSFSKIDSGPLARFPRILGHEAVGVIESIGEHVNGFQQGDVVLPVFHPHCEECRDCKSSKSNWCARFADDF--LSNTRRYGMTSRFKDSFGEDIYHFLFVSSFSEYTVVDIAHLVKISPDIPVDKAALLSCGVSTGIGAAWKVANVEKGSTVAVFGLGAVGLAVGEGARLRG 227          
The following BLAST results are available for this feature:
BLAST of FC930839 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 163
Match NameE-valueIdentityDescription
ADH1_PETHY8.028e-4142.86Alcohol dehydrogenase 1 OS=Petunia hybrida GN=ADH1... [more]
ADH1_ORYSJ1.369e-4042.86Alcohol dehydrogenase 1 OS=Oryza sativa subsp. jap... [more]
ADH1_ORYSI1.369e-4042.86Alcohol dehydrogenase 1 OS=Oryza sativa subsp. ind... [more]
ADHX_UROHA1.789e-4045.21Alcohol dehydrogenase class-3 OS=Uromastyx hardwic... [more]
ADHL1_ARATH1.789e-4040.64Alcohol dehydrogenase-like 1 OS=Arabidopsis thalia... [more]
ADHH_GADMO1.789e-4044.81Alcohol dehydrogenase class-3 chain H OS=Gadus mor... [more]
ADH1_PEA1.789e-4041.47Alcohol dehydrogenase 1 OS=Pisum sativum PE=3 SV=1[more]
ADH1_NAJNA2.336e-4045.90Alcohol dehydrogenase 1 OS=Naja naja PE=1 SV=1[more]
FADH_YEAST3.984e-4041.55S-(hydroxymethyl)glutathione dehydrogenase OS=Sacc... [more]
ADHL5_ARATH3.984e-4041.31Alcohol dehydrogenase-like 5 OS=Arabidopsis thalia... [more]

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Properties
Property NameValue
Genbank descriptionC34109F01EF PostHarvP1 Citrus clementina cDNA clone C34109F01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930839 ID=FC930839; Name=FC930839; organism=Citrus clementina; type=EST; length=710bp
GAGATTAGTTTGAACTTTGAAGTTGTAAAATCAACGAGTCTCCAGCAATA
AAGATGAGCATATCGCCAGCCATGACATGCAAAGCTGTTGTATGCTGGGG
TGAAGGAGAACCATGGAAAGTAGAAGAGATACAGGTGGAGCCTCCAAAAG
CAACAGAAGTTAGAGTCAAAATGCTTTATGCTAGCATTTGTCACACTGAT
ATCTTATCCTCTAAAGGGTTCCCATTGCCCCTTTTCCCTCGTGTTCTTGG
TCATGAAGGTGTCGGGATGGTGGAGAGTATCGGTGATGAAGTGAAAGAAT
TAAAGGAAGGAGATATTGTGATTCCAACATTTATTGGAGAATGTAGAGAA
TGTGAAAATTGCACATCAGAGATGGCCAATCTATGCCTAAAATATCCATT
CACCTTCCATGGGTTAATGCCGGATGGCAGTTCAAGAATGTCCATAAGAG
GCCAGAAATTGTATCACATATTTACATGCTCCACAATGACCGAATATATG
GTGGTTGATGCCAATTATGTTGTGAAAGTTGATCCAAGTATAGATCTTTC
ACTTGCTAGCTTCCTTTCATGTGGATACTCATCAGGATTTGGTGCAGCTT
GGAAGGAATTCAAAGTTGAAAAAGGATCAAGTGTTGCTGTTTTTGGCCTT
GGTGCTGTTGGATTAGGGGTTATGGATGGAGCCAGAATCCAGGGGCAGCT
AAAATATTGG
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