FC930840

Overview
NameFC930840
Unique NameFC930840
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length676
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930840 vs. ExPASy Swiss-Prot
Match: TRPD_DESOH (Anthranilate phosphoribosyltransferase OS=Desulfococcus oleovorans (strain DSM 6200 / Hxd3) GN=trpD PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 2.252e-17
Identity = 44/101 (43.56%), Postives = 57/101 (56.44%), Query Frame = 2
Query:  362 AMIKYATKVEGLGDAV-DIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMK 661
            AM + AT+++     V D  GTGGDGA+T NIST ++ + A  G  VAK             DVLEALGV +D  PE     V+E GIGF+ +  +H AMK
Sbjct:   60 AMRRKATRIQAASPVVVDTCGTGGDGAHTFNISTTSAFVVAGAGICVAKHGNRSVSSKCGSADVLEALGVKLDTQPEVAEEAVNEIGIGFLFAPLFHGAMK 160          

HSP 2 Score: 31.187 bits (69), Expect = 2.252e-17
Identity = 18/52 (34.62%), Postives = 26/52 (50.00%), Query Frame = 1
Query:  208 FNELIDCLISRVDLTEAEAQASL-DYLLNEADEALISAFLVLLRAKGETFGE 360
            F++ +  +I+R DL+  E      D       +A I AF+  L  KGETF E
Sbjct:    2 FSQTLSKIINRKDLSREEMDRIFSDIFSGNLTDAQIGAFMAALATKGETFEE 53          
BLAST of FC930840 vs. ExPASy Swiss-Prot
Match: TRPD_BURCH (Anthranilate phosphoribosyltransferase OS=Burkholderia cenocepacia (strain HI2424) GN=trpD PE=3 SV=2)

HSP 1 Score: 88.9669 bits (219), Expect = 2.530e-17
Identity = 48/98 (48.98%), Postives = 60/98 (61.22%), Query Frame = 2
Query:  383 KVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKVVRPV 676
            +V+   + VDIVGTGGDG++T NIST +  + AA GAKVAK             DVLEALGV IDL  E V   + E G+GFM +  +HPAMK +  V
Sbjct:   72 EVQDNSNFVDIVGTGGDGSHTFNISTASMFVTAAAGAKVAKHGNRGVSSKSGSADVLEALGVNIDLQSEQVAASIAETGMGFMFAPNHHPAMKNIAAV 169          
BLAST of FC930840 vs. ExPASy Swiss-Prot
Match: TRPD_BURCA (Anthranilate phosphoribosyltransferase OS=Burkholderia cenocepacia (strain AU 1054) GN=trpD PE=3 SV=2)

HSP 1 Score: 88.9669 bits (219), Expect = 2.530e-17
Identity = 48/98 (48.98%), Postives = 60/98 (61.22%), Query Frame = 2
Query:  383 KVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKVVRPV 676
            +V+   + VDIVGTGGDG++T NIST +  + AA GAKVAK             DVLEALGV IDL  E V   + E G+GFM +  +HPAMK +  V
Sbjct:   72 EVQDNSNFVDIVGTGGDGSHTFNISTASMFVTAAAGAKVAKHGNRGVSSKSGSADVLEALGVNIDLQSEQVAASIAETGMGFMFAPNHHPAMKNIAAV 169          
BLAST of FC930840 vs. ExPASy Swiss-Prot
Match: TRPD_PYRAE (Anthranilate phosphoribosyltransferase OS=Pyrobaculum aerophilum GN=trpD PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.304e-17
Identity = 44/102 (43.14%), Postives = 61/102 (59.80%), Query Frame = 2
Query:  371 KYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKVVRPV 676
            ++A +V    +A+D  GTGGDGA T+N+ST A+I+AAA GAKV K             D +EA+G  +++ PE   R V+E G  F+ + KYHPA   V PV
Sbjct:   64 EFAVRVPLTVEAIDTAGTGGDGAGTINLSTAAAIVAAAAGAKVLKHGNRSASGMFGSADFMEAVGYNLEIGPERAARLVEEVGFAFVFAPKYHPAFARVAPV 165          
BLAST of FC930840 vs. ExPASy Swiss-Prot
Match: TRPD_PSEPU (Anthranilate phosphoribosyltransferase OS=Pseudomonas putida GN=trpD PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.304e-17
Identity = 48/101 (47.52%), Postives = 59/101 (58.42%), Query Frame = 2
Query:  365 MIKYATKVE--GLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMK 661
            M + A KVE   L   VDIVGTGGDGAN  N+ST +S + AA G  VAK             D+LEA G+ ++L P  V RC+D  GIGFM +  +H AMK
Sbjct:   62 MRELADKVELKSLDGVVDIVGTGGDGANIFNVSTASSFVLAAAGCTVAKHGNRAVSGKSGSADLLEAAGIYLNLTPTQVARCIDSLGIGFMFAQSHHSAMK 162          
BLAST of FC930840 vs. ExPASy Swiss-Prot
Match: TRPD_PSEPK (Anthranilate phosphoribosyltransferase OS=Pseudomonas putida (strain KT2440) GN=trpD PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.304e-17
Identity = 48/101 (47.52%), Postives = 59/101 (58.42%), Query Frame = 2
Query:  365 MIKYATKVE--GLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMK 661
            M + A KVE   L   VDIVGTGGDGAN  N+ST +S + AA G  VAK             D+LEA G+ ++L P  V RC+D  GIGFM +  +H AMK
Sbjct:   62 MRELAEKVELQSLDGVVDIVGTGGDGANIFNVSTASSFVLAAAGCPVAKHGNRAVSGKSGSADLLEAAGIYLNLTPTQVARCIDSLGIGFMFAQSHHSAMK 162          
BLAST of FC930840 vs. ExPASy Swiss-Prot
Match: TRPD_PSEP1 (Anthranilate phosphoribosyltransferase OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=trpD PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.304e-17
Identity = 48/101 (47.52%), Postives = 59/101 (58.42%), Query Frame = 2
Query:  365 MIKYATKVE--GLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMK 661
            M + A KVE   L   VDIVGTGGDGAN  N+ST +S + AA G  VAK             D+LEA G+ ++L P  V RC+D  GIGFM +  +H AMK
Sbjct:   62 MRELAEKVELQSLDGVVDIVGTGGDGANIFNVSTASSFVLAAAGCPVAKHGNRAVSGKSGSADLLEAAGIYLNLTPTQVARCIDSLGIGFMFAQSHHSAMK 162          
BLAST of FC930840 vs. ExPASy Swiss-Prot
Match: TRPD_PSE14 (Anthranilate phosphoribosyltransferase OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=trpD PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.304e-17
Identity = 44/95 (46.32%), Postives = 58/95 (61.05%), Query Frame = 2
Query:  377 ATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMK 661
            + +++ L   VDIVGTGGDGAN  N+ST ++ + AA G KVAK             D+LEA GV ++L P  V RC+D  GIGFM +  +H AMK
Sbjct:   68 SVELKTLDGVVDIVGTGGDGANIFNVSTASAFVIAAAGCKVAKHGNRAVSGKSGSADLLEAAGVYLNLTPVQVARCIDSVGIGFMFAQSHHTAMK 162          
BLAST of FC930840 vs. ExPASy Swiss-Prot
Match: TRPD_NITOC (Anthranilate phosphoribosyltransferase OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) GN=trpD PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.304e-17
Identity = 46/102 (45.10%), Postives = 62/102 (60.78%), Query Frame = 2
Query:  359 RAMIKYATKVEGLGD-AVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMK 661
            R M + ATKV   G   VD  GTGGDGANT NIST ++ + AA G +VAK             DVLEA G+ ++L PE + RC++E G+GF+ +  +H A+K
Sbjct:   60 RVMRELATKVTVTGPHLVDTCGTGGDGANTFNISTASAFVVAAAGGRVAKHGNRSVSSQCGSADVLEAAGIKLELTPEQIARCIEELGVGFLFAPCHHSAIK 161          
BLAST of FC930840 vs. ExPASy Swiss-Prot
Match: TRPD_NEIMF (Anthranilate phosphoribosyltransferase OS=Neisseria meningitidis serogroup C / serotype 2a (strain ATCC 700532 / FAM18) GN=trpD PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.304e-17
Identity = 50/106 (47.17%), Postives = 64/106 (60.38%), Query Frame = 2
Query:  365 MIKYATKV--EGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKVVRPV 676
            M ++ATKV  E     VDIVGTGGDGA T NIST +  +AAA GAKVAK             DV+E +G  ++L PE V + + + GIGFM +  +H AM+ V PV
Sbjct:   63 MREFATKVPLENAEGLVDIVGTGGDGAKTFNISTTSMFVAAAAGAKVAKHGGRSVSSSSGAADVVEQMGANLNLTPEQVAQSIRQTGIGFMFAPNHHSAMRHVAPV 168          
The following BLAST results are available for this feature:
BLAST of FC930840 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TRPD_DESOH2.252e-1743.56Anthranilate phosphoribosyltransferase OS=Desulfoc... [more]
TRPD_BURCH2.530e-1748.98Anthranilate phosphoribosyltransferase OS=Burkhold... [more]
TRPD_BURCA2.530e-1748.98Anthranilate phosphoribosyltransferase OS=Burkhold... [more]
TRPD_PYRAE3.304e-1743.14Anthranilate phosphoribosyltransferase OS=Pyrobacu... [more]
TRPD_PSEPU3.304e-1747.52Anthranilate phosphoribosyltransferase OS=Pseudomo... [more]
TRPD_PSEPK3.304e-1747.52Anthranilate phosphoribosyltransferase OS=Pseudomo... [more]
TRPD_PSEP13.304e-1747.52Anthranilate phosphoribosyltransferase OS=Pseudomo... [more]
TRPD_PSE143.304e-1746.32Anthranilate phosphoribosyltransferase OS=Pseudomo... [more]
TRPD_NITOC3.304e-1745.10Anthranilate phosphoribosyltransferase OS=Nitrosoc... [more]
TRPD_NEIMF3.304e-1747.17Anthranilate phosphoribosyltransferase OS=Neisseri... [more]

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Properties
Property NameValue
Genbank descriptionC34109F02EF PostHarvP1 Citrus clementina cDNA clone C34109F02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930840 ID=FC930840; Name=FC930840; organism=Citrus clementina; type=EST; length=676bp
AAAATGACAATGAGAGCGTTGTTGAATTTAACTGCAGTTTCTTCCTCTCC
ATTTAATAATAATCACCCAAATCACCGGCCTTCCTTACCGTCGCTTCGAA
ACTGTGGATTTACGACTGCGGGTAATAATCCGAGATGCAGAGAATTAACT
GCTATTCAAACCCCTCAGCCGGCTGTTTCTGATAATACTCGTCCTCTAAC
GCCCTGCTTTAATGAGTTGATCGATTGCTTGATAAGTCGAGTGGATTTAA
CGGAGGCGGAGGCTCAAGCTTCGCTGGATTATTTGTTGAATGAAGCTGAT
GAGGCCTTGATTAGTGCTTTTCTTGTTTTGCTCAGAGCCAAAGGAGAAAC
ATTTGGAGAGGGCGATGATAAAGTATGCTACGAAGGTGGAAGGGCTGGGT
GATGCAGTTGACATTGTGGGTACAGGAGGTGATGGTGCAAACACAGTGAA
CATTTCAACTGGTGCTTCAATTCTTGCTGCAGCTTGTGGTGCAAAAGTTG
CCAAGCAAGGGAGTCGGTCTAGTTCTTCTGCATGTGGAAGTGCTGATGTG
TTAGAAGCTTTGGGTGTCGTTATTGACTTGGACCCAGAGGGTGTAAGAAG
GTGTGTGGATGAGGCAGGAATTGGTTTCATGATGTCGACNAAGTATCACC
CTGCAATGAAAGTTGTCAGGCCAGTG
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