FC930840

Overview
NameFC930840
Unique NameFC930840
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length676
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930840 vs. ExPASy Swiss-Prot
Match: TRPD_ARTAT (Anthranilate phosphoribosyltransferase OS=Arthrobacter aurescens (strain TC1) GN=trpD PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.282e-21
Identity = 48/103 (46.60%), Postives = 64/103 (62.14%), Query Frame = 2
Query:  353 LERAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMK 661
            L  AM+++A  ++  G+ +DIVGTGGD  NTVNIST A+++AA  GAKV K             DVLEALGV +DL  E V R  +EAGI F  +  +HP+ +
Sbjct:   69 LVEAMVQHANPIDISGEKLDIVGTGGDRLNTVNISTMAALVAAGAGAKVVKHGNRAASSASGSADVLEALGVRLDLSIEQVARNAEEAGITFCFAQVFHPSFR 171          

HSP 2 Score: 33.8834 bits (76), Expect = 2.282e-21
Identity = 21/49 (42.86%), Postives = 29/49 (59.18%), Query Frame = 1
Query:  217 LIDCLISRVDLTEAEAQASLDYLL-NEADEALISAFLVLLRAKGETFGE 360
            LI  LI+  DL     + +++ ++  EA  A I+ FLV LRAKGET  E
Sbjct:   17 LISALINGDDLAVGNTEWAMNTIMAGEATPAQIAGFLVALRAKGETVEE 65          
BLAST of FC930840 vs. ExPASy Swiss-Prot
Match: TRPD_ACIAC (Anthranilate phosphoribosyltransferase OS=Acidovorax avenae subsp. citrulli (strain AAC00-1) GN=trpD PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 2.888e-21
Identity = 52/90 (57.78%), Postives = 60/90 (66.67%), Query Frame = 2
Query:  407 VDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKVVRPV 676
            VDIVGTGGDGANT NIST A  +AAA GAK AK             DV+E+LGV IDL PE + RC+ + GIGFM +  +HPAMK V PV
Sbjct:   80 VDIVGTGGDGANTFNISTCAMFVAAAAGAKTAKHGGRGVSSKSGSADVMESLGVHIDLPPEAIARCIADTGIGFMFAPNHHPAMKNVAPV 169          
BLAST of FC930840 vs. ExPASy Swiss-Prot
Match: TRPD_METS4 (Anthranilate phosphoribosyltransferase OS=Methylobacterium sp. (strain 4-46) GN=trpD PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.971e-21
Identity = 49/105 (46.67%), Postives = 65/105 (61.90%), Query Frame = 2
Query:  362 AMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKVVRPV 676
            A+ +   +V     A+DIVGTGGD + + N+ST ASIL AACG  VAK             DVL ALGV + LDPEG+ RC++EAG+ FM +  +H +M+ V PV
Sbjct:   62 ALRERMVRVVAPAGAIDIVGTGGDHSGSYNVSTLASILTAACGVPVAKHGNRAASSRSGAADVLAALGVRLGLDPEGLARCLEEAGLCFMFAQAHHASMRHVAPV 166          

HSP 2 Score: 30.0314 bits (66), Expect = 2.971e-21
Identity = 17/39 (43.59%), Postives = 23/39 (58.97%), Query Frame = 1
Query:  247 LTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGE 360
            LT  EA+ + D+LL+ E   A   AFL+ LR +GE   E
Sbjct:   17 LTREEARTAFDHLLSGEVTHAQAGAFLMALRVRGEAQDE 55          
BLAST of FC930840 vs. ExPASy Swiss-Prot
Match: TRPD_CARHZ (Anthranilate phosphoribosyltransferase OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=trpD PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 5.027e-21
Identity = 50/96 (52.08%), Postives = 57/96 (59.38%), Query Frame = 2
Query:  380 TKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKVV 667
            T+ EGL   VD  GTGGDG  T NIST A+ + A  G  VAK             DVLEALGV IDLD +G  RCVDE GIGF+ +   HPAM+ V
Sbjct:   70 TQTEGL---VDTCGTGGDGRQTFNISTAAAFVVAGAGIPVAKHGNRSVSSRSGSADVLEALGVNIDLDAKGTARCVDEIGIGFLFAPNLHPAMRHV 162          

HSP 2 Score: 31.187 bits (69), Expect = 5.027e-21
Identity = 18/47 (38.30%), Postives = 32/47 (68.09%), Query Frame = 1
Query:  214 ELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGET 351
            E+++ L+   +L  +EA A+++ L+  +  EA ++AFLV L+ KGET
Sbjct:    4 EVLERLMRGENLNFSEALATMNELMEGKYTEAQVAAFLVALKMKGET 50          
BLAST of FC930840 vs. ExPASy Swiss-Prot
Match: TRPD_PARL1 (Anthranilate phosphoribosyltransferase OS=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) GN=trpD PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 5.027e-21
Identity = 46/104 (44.23%), Postives = 62/104 (59.62%), Query Frame = 2
Query:  365 MIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKVVRPV 676
            M + A +V    +A+DIVGTGGDG  T NIST  +++ AA G  VAK             D L+ALGV +D+DP  +   +++AGIGFM +  +H AMK V PV
Sbjct:   63 MRERALRVTAPANAIDIVGTGGDGVGTWNISTATALVVAAAGVPVAKHGNRKASSLSGTADALQALGVNLDIDPATIAASIEKAGIGFMFAQAHHAAMKHVAPV 166          

HSP 2 Score: 33.113 bits (74), Expect = 5.027e-21
Identity = 21/52 (40.38%), Postives = 31/52 (59.62%), Query Frame = 1
Query:  208 FNELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGE 360
            F  +I  L     L  AEA+A+ + +++ EA +A I AFL+ LR +GET  E
Sbjct:    4 FKTIIARLAEGRALDAAEARAAFEIVMSGEATQAQIGAFLMGLRVRGETVAE 55          
BLAST of FC930840 vs. ExPASy Swiss-Prot
Match: TRPD_THISH (Anthranilate phosphoribosyltransferase OS=Thioalkalivibrio sp. (strain HL-EbGR7) GN=trpD PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 5.028e-21
Identity = 46/102 (45.10%), Postives = 62/102 (60.78%), Query Frame = 2
Query:  359 RAMIKYATKVE-GLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMK 661
            R M   AT+VE   G  VD  GTGGD + + NIST ++++ AA G +VAK             DVLEA GV +DL PE V RC+++ G+GF+ + K+H AMK
Sbjct:   60 RVMRDLATRVEVQAGHLVDTCGTGGDASGSFNISTASALVVAAAGGRVAKHGNRSVSSKSGSADVLEAAGVNLDLSPEQVARCIEQVGVGFLFAPKHHGAMK 161          

HSP 2 Score: 33.4982 bits (75), Expect = 5.028e-21
Identity = 20/50 (40.00%), Postives = 28/50 (56.00%), Query Frame = 1
Query:  214 ELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGE 360
            + I  +  R+DL+E E  A +  ++N EA  A +  FLV L  KGET  E
Sbjct:    5 QAIRAVTQRIDLSEQEMTAVMGLIMNGEATPAQMGGFLVGLAMKGETVDE 54          
BLAST of FC930840 vs. ExPASy Swiss-Prot
Match: TRPD_VEREI (Anthranilate phosphoribosyltransferase OS=Verminephrobacter eiseniae (strain EF01-2) GN=trpD PE=3 SV=2)

HSP 1 Score: 100.908 bits (250), Expect = 6.434e-21
Identity = 55/108 (50.93%), Postives = 69/108 (63.89%), Query Frame = 2
Query:  359 RAMIKYATKVE--GLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKVVRPV 676
            + M +++TKV+       VDIVGTGGDGA+T NIST A  +AAA GAKV+K             DV+EALG+ I L PE + RC+ E GIGFM +  +HPAMK V PV
Sbjct:   62 QVMREFSTKVQVPDRKHLVDIVGTGGDGASTFNISTCAMFVAAAAGAKVSKHGGRSVSSKSGSADVMEALGIHIHLAPEAIARCIAEVGIGFMFAPNHHPAMKNVAPV 169          
BLAST of FC930840 vs. ExPASy Swiss-Prot
Match: TRPD_RHOP5 (Anthranilate phosphoribosyltransferase OS=Rhodopseudomonas palustris (strain BisA53) GN=trpD PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 8.403e-21
Identity = 50/91 (54.95%), Postives = 61/91 (67.03%), Query Frame = 2
Query:  401 DAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKVVRP 673
            DAVD+VGTGGDG+ +VN+ST A+ + A CGA VAK             DVL ALGV ID+ P+ V RC+ EAGIGFM +  +HPAMK V P
Sbjct:   75 DAVDVVGTGGDGSGSVNVSTCAAFIVAGCGAPVAKHGNRALSSRSGAADVLAALGVKIDITPDQVGRCIAEAGIGFMFAPTHHPAMKNVGP 165          
BLAST of FC930840 vs. ExPASy Swiss-Prot
Match: TRPD_ROSCS (Anthranilate phosphoribosyltransferase OS=Roseiflexus castenholzii (strain DSM 13941 / HLO8) GN=trpD PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.097e-20
Identity = 54/108 (50.00%), Postives = 64/108 (59.26%), Query Frame = 2
Query:  353 LERAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKVVRPV 676
            + R M   A  V   G  +D  GTGGD A T NIST A+ +AA  GA VAK             DVLE LGV IDLD  GV RC+++AGIGFM + K+HPAM+ V PV
Sbjct:   58 MARVMRAKAIPVHFDGPLLDTCGTGGDSAGTFNISTTAAFIAAGAGATVAKHGNRAMSSVCGSADVLEGLGVTIDLDAAGVARCLEQAGIGFMFAQKFHPAMRFVGPV 165          
BLAST of FC930840 vs. ExPASy Swiss-Prot
Match: TRPD_GEOMG (Anthranilate phosphoribosyltransferase OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=trpD PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.106e-20
Identity = 41/85 (48.24%), Postives = 51/85 (60.00%), Query Frame = 2
Query:  407 VDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMK 661
            +D+VGTGGDG NT NIST  S + A+CG KVAK             DVLE+LGV +D+ PE V   +   GIGF+ +   H AMK
Sbjct:   90 LDVVGTGGDGTNTFNISTTVSFVVASCGVKVAKHGNRAVSSACGSADVLESLGVSLDVTPETVENAIARIGIGFLFAPALHGAMK 174          

HSP 2 Score: 38.1206 bits (87), Expect = 1.106e-20
Identity = 20/45 (44.44%), Postives = 30/45 (66.67%), Query Frame = 1
Query:  229 LISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGE 360
            ++ R+DLTEAE    +D +++ EA  A I++F+  LR KGET  E
Sbjct:    9 VVERIDLTEAEMIEVMDQIMSGEATPAQIASFITALRMKGETVEE 53          
The following BLAST results are available for this feature:
BLAST of FC930840 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TRPD_ARTAT2.282e-2146.60Anthranilate phosphoribosyltransferase OS=Arthroba... [more]
TRPD_ACIAC2.888e-2157.78Anthranilate phosphoribosyltransferase OS=Acidovor... [more]
TRPD_METS42.971e-2146.67Anthranilate phosphoribosyltransferase OS=Methylob... [more]
TRPD_CARHZ5.027e-2152.08Anthranilate phosphoribosyltransferase OS=Carboxyd... [more]
TRPD_PARL15.027e-2144.23Anthranilate phosphoribosyltransferase OS=Parvibac... [more]
TRPD_THISH5.028e-2145.10Anthranilate phosphoribosyltransferase OS=Thioalka... [more]
TRPD_VEREI6.434e-2150.93Anthranilate phosphoribosyltransferase OS=Verminep... [more]
TRPD_RHOP58.403e-2154.95Anthranilate phosphoribosyltransferase OS=Rhodopse... [more]
TRPD_ROSCS1.097e-2050.00Anthranilate phosphoribosyltransferase OS=Roseifle... [more]
TRPD_GEOMG1.106e-2048.24Anthranilate phosphoribosyltransferase OS=Geobacte... [more]

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Properties
Property NameValue
Genbank descriptionC34109F02EF PostHarvP1 Citrus clementina cDNA clone C34109F02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930840 ID=FC930840; Name=FC930840; organism=Citrus clementina; type=EST; length=676bp
AAAATGACAATGAGAGCGTTGTTGAATTTAACTGCAGTTTCTTCCTCTCC
ATTTAATAATAATCACCCAAATCACCGGCCTTCCTTACCGTCGCTTCGAA
ACTGTGGATTTACGACTGCGGGTAATAATCCGAGATGCAGAGAATTAACT
GCTATTCAAACCCCTCAGCCGGCTGTTTCTGATAATACTCGTCCTCTAAC
GCCCTGCTTTAATGAGTTGATCGATTGCTTGATAAGTCGAGTGGATTTAA
CGGAGGCGGAGGCTCAAGCTTCGCTGGATTATTTGTTGAATGAAGCTGAT
GAGGCCTTGATTAGTGCTTTTCTTGTTTTGCTCAGAGCCAAAGGAGAAAC
ATTTGGAGAGGGCGATGATAAAGTATGCTACGAAGGTGGAAGGGCTGGGT
GATGCAGTTGACATTGTGGGTACAGGAGGTGATGGTGCAAACACAGTGAA
CATTTCAACTGGTGCTTCAATTCTTGCTGCAGCTTGTGGTGCAAAAGTTG
CCAAGCAAGGGAGTCGGTCTAGTTCTTCTGCATGTGGAAGTGCTGATGTG
TTAGAAGCTTTGGGTGTCGTTATTGACTTGGACCCAGAGGGTGTAAGAAG
GTGTGTGGATGAGGCAGGAATTGGTTTCATGATGTCGACNAAGTATCACC
CTGCAATGAAAGTTGTCAGGCCAGTG
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