FC930840
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930840 vs. ExPASy Swiss-Prot
Match: TRPD_AGRVS (Anthranilate phosphoribosyltransferase OS=Agrobacterium vitis (strain S4 / ATCC BAA-846) GN=trpD PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 1.994e-19 Identity = 43/91 (47.25%), Postives = 56/91 (61.54%), Query Frame = 2 Query: 401 DAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKVVRP 673 D++DIVGTGGDG T NIST A+++ A G VAK D L ALGV +D+DP + RC+ EAG+GFM + +H AM+ V P Sbjct: 75 DSIDIVGTGGDGTGTYNISTLAALIVAGAGVPVAKHGNKALSSKSGAADSLTALGVKLDIDPSVIGRCISEAGVGFMFAQLHHSAMRHVGP 165 HSP 2 Score: 28.4906 bits (62), Expect = 1.994e-19 Identity = 17/39 (43.59%), Postives = 23/39 (58.97%), Query Frame = 1 Query: 247 LTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGE 360 LT EA + + L++ EA A I FL+ LR +GET E Sbjct: 17 LTRDEAADAFNILMSGEATPAQIGGFLIALRMRGETVPE 55
BLAST of FC930840 vs. ExPASy Swiss-Prot
Match: TRPD_ROSS1 (Anthranilate phosphoribosyltransferase OS=Roseiflexus sp. (strain RS-1) GN=trpD PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.070e-19 Identity = 53/108 (49.07%), Postives = 63/108 (58.33%), Query Frame = 2 Query: 353 LERAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKVVRPV 676 + R M A V +D GTGGDGA T NIST A+ +AA GA VAK DVLE LGV I+LD V RC+D+AGIGFM + K+HPAM+ V PV Sbjct: 58 MARVMRAKAIPVHFDAPLLDTCGTGGDGAGTFNISTTAAFIAAGAGAIVAKHGNRAMSSVCGSADVLEGLGVNIELDAASVARCLDQAGIGFMFAQKFHPAMRFVGPV 165
BLAST of FC930840 vs. ExPASy Swiss-Prot
Match: TRPD_RHOSR (Anthranilate phosphoribosyltransferase OS=Rhodococcus sp. (strain RHA1) GN=trpD PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.070e-19 Identity = 54/109 (49.54%), Postives = 69/109 (63.30%), Query Frame = 2 Query: 338 PKE-KHLERAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMK 661 P+E + L +M+ +A KV D VDIVGTGGD +NTVNIST AS++ AA G +V K DVLEALGV I+L P+ V RCV E GIGF + +HPA++ Sbjct: 68 PEELRGLADSMLGHARKVPVDDDVVDIVGTGGDRSNTVNISTMASLVVAASGIRVVKHGNRAASSKSGGADVLEALGVKINLGPDEVARCVREVGIGFCFAPVFHPALR 176
BLAST of FC930840 vs. ExPASy Swiss-Prot
Match: TRPD_RHOOB (Anthranilate phosphoribosyltransferase OS=Rhodococcus opacus (strain B4) GN=trpD PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.070e-19 Identity = 54/109 (49.54%), Postives = 69/109 (63.30%), Query Frame = 2 Query: 338 PKE-KHLERAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMK 661 P+E + L +M+ +A KV D VDIVGTGGD +NTVNIST AS++ AA G +V K DVLEALGV I+L P+ V RCV E GIGF + +HPA++ Sbjct: 68 PEELRGLADSMLGHARKVPVDDDVVDIVGTGGDRSNTVNISTMASLVVAASGIRVVKHGNRAASSKSGGADVLEALGVKINLGPDEVARCVREVGIGFCFAPVFHPALR 176
BLAST of FC930840 vs. ExPASy Swiss-Prot
Match: TRPD_STRMK (Anthranilate phosphoribosyltransferase OS=Stenotrophomonas maltophilia (strain K279a) GN=trpD PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.703e-19 Identity = 50/97 (51.55%), Postives = 61/97 (62.89%), Query Frame = 2 Query: 386 VEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKVVRPV 676 V + VDIVGTGGDG++T NIST A +AAA GA+VAK D LEALG VI+L P+ V +D GIGFM + +HP+MKVV PV Sbjct: 73 VADTSNLVDIVGTGGDGSHTFNISTCAMFVAAAAGARVAKHGNRSVSSKSGSADALEALGAVIELQPDQVAAAIDRTGIGFMFAPIHHPSMKVVAPV 169
BLAST of FC930840 vs. ExPASy Swiss-Prot
Match: TRPD1_RALSO (Anthranilate phosphoribosyltransferase 1 OS=Ralstonia solanacearum GN=trpD1 PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.703e-19 Identity = 54/108 (50.00%), Postives = 67/108 (62.04%), Query Frame = 2 Query: 365 MIKYATKVEG----LGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKVVRPV 676 M ++AT V+ L VDIVGTGGDGANT NIST + +AAA GA++AK DVLEALGV I L PE V + ++ GIGFM + +HPAMK V P+ Sbjct: 64 MREFATTVDVPAAILDHFVDIVGTGGDGANTFNISTASMFVAAAAGARIAKHGGRGVSSKSGSADVLEALGVNIMLTPEQVAQSIEAVGIGFMFAPNHHPAMKNVAPI 171
BLAST of FC930840 vs. ExPASy Swiss-Prot
Match: TRPD_PELPD (Anthranilate phosphoribosyltransferase OS=Pelobacter propionicus (strain DSM 2379) GN=trpD PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 3.371e-19 Identity = 39/85 (45.88%), Postives = 53/85 (62.35%), Query Frame = 2 Query: 407 VDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMK 661 +D+VGTGGDG NT N+ST + + +ACG KVAK DVLE LGV +D+ PE V +C+ + GIGF+ + H AM+ Sbjct: 90 LDVVGTGGDGTNTFNVSTTVAFVVSACGVKVAKHGNRSVSSLCGSADVLEKLGVNLDITPETVEQCITKIGIGFLFAPALHGAMR 174 HSP 2 Score: 31.9574 bits (71), Expect = 3.371e-19 Identity = 18/45 (40.00%), Postives = 25/45 (55.56%), Query Frame = 1 Query: 229 LISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGE 360 ++ + DLTE E + ++ EA A I AF+ LR KGET E Sbjct: 9 IVEQKDLTEGEMIEVMGQIMTGEATPAQIGAFITALRMKGETIDE 53
BLAST of FC930840 vs. ExPASy Swiss-Prot
Match: TRPD_DIAST (Anthranilate phosphoribosyltransferase OS=Diaphorobacter sp. (strain TPSY) GN=trpD PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 3.530e-19 Identity = 48/90 (53.33%), Postives = 59/90 (65.56%), Query Frame = 2 Query: 407 VDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKVVRPV 676 VDIVGTGGDGANT NIST A+ + AA GAKV+K D +EALGV I+L P + +C+ + GIGFM + +HPAMK V PV Sbjct: 81 VDIVGTGGDGANTFNISTCATFVIAAAGAKVSKHGGRSVSSKSGSADAMEALGVHINLQPAQIAQCIGDVGIGFMFAPNHHPAMKNVAPV 170
BLAST of FC930840 vs. ExPASy Swiss-Prot
Match: TRPD_BURXL (Anthranilate phosphoribosyltransferase OS=Burkholderia xenovorans (strain LB400) GN=trpD PE=3 SV=2) HSP 1 Score: 95.1301 bits (235), Expect = 3.530e-19 Identity = 50/98 (51.02%), Postives = 62/98 (63.27%), Query Frame = 2 Query: 383 KVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKVVRPV 676 +V+ + VDIVGTGGDG++T NIST ++AA GAKVAK DVLEALGV IDL PE V + E G+GFM + +HPAMK + PV Sbjct: 72 EVQDNSNFVDIVGTGGDGSHTFNISTATMFVSAAAGAKVAKHGGRSVSSKSGSADVLEALGVNIDLQPEQVAASIAETGMGFMFAPNHHPAMKNIAPV 169
BLAST of FC930840 vs. ExPASy Swiss-Prot
Match: TRPD_BURP8 (Anthranilate phosphoribosyltransferase OS=Burkholderia phymatum (strain DSM 17167 / STM815) GN=trpD PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 3.530e-19 Identity = 50/97 (51.55%), Postives = 61/97 (62.89%), Query Frame = 2 Query: 386 VEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKVVRPV 676 V+ + VDIVGTGGDG++T NIST ++AA GAKVAK DVLEALGV IDL PE V + E G+GFM + +HPAMK + PV Sbjct: 72 VQDNSNFVDIVGTGGDGSHTFNISTATMFVSAAAGAKVAKHGNRGVSSKSGSADVLEALGVNIDLQPEQVAASITETGMGFMFAPNHHPAMKNIAPV 168 The following BLAST results are available for this feature:
BLAST of FC930840 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC930840 ID=FC930840; Name=FC930840; organism=Citrus clementina; type=EST; length=676bpback to top |