FC930840
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930840 vs. ExPASy Swiss-Prot
Match: TRPD_ACISJ (Anthranilate phosphoribosyltransferase OS=Acidovorax sp. (strain JS42) GN=trpD PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 3.530e-19 Identity = 48/90 (53.33%), Postives = 59/90 (65.56%), Query Frame = 2 Query: 407 VDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKVVRPV 676 VDIVGTGGDGANT NIST A+ + AA GAKV+K D +EALGV I+L P + +C+ + GIGFM + +HPAMK V PV Sbjct: 81 VDIVGTGGDGANTFNISTCATFVIAAAGAKVSKHGGRSVSSKSGSADAMEALGVHINLQPAQIAQCIGDVGIGFMFAPNHHPAMKNVAPV 170
BLAST of FC930840 vs. ExPASy Swiss-Prot
Match: TRPD_METLZ (Anthranilate phosphoribosyltransferase OS=Methanocorpusculum labreanum (strain ATCC 43576 / DSM 4855 / Z) GN=trpD PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 4.386e-19 Identity = 45/88 (51.14%), Postives = 51/88 (57.95%), Query Frame = 2 Query: 398 GDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMK 661 G VD GTGGDG NT NIST A+ AA G V K DVLEALG+ ID+ PE V +DE GIGFM + +HPAMK Sbjct: 74 GMLVDTCGTGGDGKNTFNISTAAAFTAAGAGVTVVKHGNRGATSKCGSADVLEALGIKIDISPERVCEIIDENGIGFMFAQSHHPAMK 161 HSP 2 Score: 28.8758 bits (63), Expect = 4.386e-19 Identity = 19/50 (38.00%), Postives = 26/50 (52.00%), Query Frame = 1 Query: 214 ELIDCLISRVDLTEAEAQASL-DYLLNEADEALISAFLVLLRAKGETFGE 360 E I + S DL+ EA+ ++ D + A + I AFL L KGET E Sbjct: 4 ECIKKVASHSDLSVYEAKGAMQDIMSGNATDGQIGAFLTALVMKGETSSE 53
BLAST of FC930840 vs. ExPASy Swiss-Prot
Match: TRPD_THERP (Anthranilate phosphoribosyltransferase OS=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) GN=trpD PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 4.611e-19 Identity = 46/90 (51.11%), Postives = 57/90 (63.33%), Query Frame = 2 Query: 407 VDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKVVRPV 676 +D+VGTGGDG T NIST + + A G VAK DVLEALGV IDL+P V RCV+EAGIGFM + ++HPA++ PV Sbjct: 77 IDVVGTGGDGNRTFNISTATAFVVAGAGVPVAKHGNRAMSSRAGSADVLEALGVRIDLNPSAVARCVEEAGIGFMFAQRFHPALRHAAPV 166
BLAST of FC930840 vs. ExPASy Swiss-Prot
Match: TRPD_BRAJA (Anthranilate phosphoribosyltransferase OS=Bradyrhizobium japonicum GN=trpD PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 4.611e-19 Identity = 50/91 (54.95%), Postives = 58/91 (63.74%), Query Frame = 2 Query: 401 DAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKVVRP 673 DAVDIVGTGGDG+ +VN+ST AS + + G VAK DVL +LGV IDL PE V RCV E GIGFM + +HPAMK V P Sbjct: 75 DAVDIVGTGGDGSGSVNVSTCASFIVSGAGVPVAKHGNRALSSRSGAADVLASLGVRIDLRPEQVGRCVRECGIGFMFAPAHHPAMKNVGP 165
BLAST of FC930840 vs. ExPASy Swiss-Prot
Match: TRPD_RHISN (Anthranilate phosphoribosyltransferase OS=Rhizobium sp. (strain NGR234) GN=trpD PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 6.022e-19 Identity = 47/96 (48.96%), Postives = 59/96 (61.46%), Query Frame = 2 Query: 386 VEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKVVRP 673 VE DA+DIVGTGGDGA T NIST AS++ A G VAK D L LGV +D+ PE + RC+ EAG+GFM + ++H AM+ V P Sbjct: 70 VEAPEDAIDIVGTGGDGAGTYNISTLASLIVAGAGVPVAKHGNRALSSKSGTADALSCLGVKLDIGPEAIARCIREAGVGFMFAQQHHSAMRHVGP 165
BLAST of FC930840 vs. ExPASy Swiss-Prot
Match: TRPD_XANCP (Anthranilate phosphoribosyltransferase OS=Xanthomonas campestris pv. campestris GN=trpD PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 7.865e-19 Identity = 51/90 (56.67%), Postives = 59/90 (65.56%), Query Frame = 2 Query: 407 VDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKVVRPV 676 VDIVGTGGDG++T NIST A +AAA GAKVAK D LEALG VI+L PE V + + GIGFM + +HPAMKVV PV Sbjct: 80 VDIVGTGGDGSHTFNISTCAMFVAAAGGAKVAKHGNRSVSSKSGSADALEALGAVIELQPEQVAASLAQTGIGFMYAPVHHPAMKVVAPV 169
BLAST of FC930840 vs. ExPASy Swiss-Prot
Match: TRPD_XANCB (Anthranilate phosphoribosyltransferase OS=Xanthomonas campestris pv. campestris (strain B100) GN=trpD PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 7.865e-19 Identity = 51/90 (56.67%), Postives = 59/90 (65.56%), Query Frame = 2 Query: 407 VDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKVVRPV 676 VDIVGTGGDG++T NIST A +AAA GAKVAK D LEALG VI+L PE V + + GIGFM + +HPAMKVV PV Sbjct: 80 VDIVGTGGDGSHTFNISTCAMFVAAAGGAKVAKHGNRSVSSKSGSADALEALGAVIELQPEQVAASLAQTGIGFMYAPVHHPAMKVVAPV 169
BLAST of FC930840 vs. ExPASy Swiss-Prot
Match: TRPD_XANC8 (Anthranilate phosphoribosyltransferase OS=Xanthomonas campestris pv. campestris (strain 8004) GN=trpD PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 7.865e-19 Identity = 51/90 (56.67%), Postives = 59/90 (65.56%), Query Frame = 2 Query: 407 VDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKVVRPV 676 VDIVGTGGDG++T NIST A +AAA GAKVAK D LEALG VI+L PE V + + GIGFM + +HPAMKVV PV Sbjct: 80 VDIVGTGGDGSHTFNISTCAMFVAAAGGAKVAKHGNRSVSSKSGSADALEALGAVIELQPEQVAASLAQTGIGFMYAPVHHPAMKVVAPV 169
BLAST of FC930840 vs. ExPASy Swiss-Prot
Match: TRPD_METKA (Anthranilate phosphoribosyltransferase OS=Methanopyrus kandleri GN=trpD PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 7.865e-19 Identity = 50/105 (47.62%), Postives = 65/105 (61.90%), Query Frame = 2 Query: 365 MIKYATKVE-GLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKVVRPV 676 M+++A KV+ + VD GTGGD +T N ST A + AAA G VAK D+LEALGV I+ DP+ V+RC++E G GFM + K+HPAMK V PV Sbjct: 59 MMEHAVKVDPDVERLVDTAGTGGDELDTFNASTLAGLTAAAAGVPVAKHGNRSVTSECGSADILEALGVNIEADPDTVKRCIEEVGFGFMFAPKFHPAMKNVMPV 163
BLAST of FC930840 vs. ExPASy Swiss-Prot
Match: TRPD_XANC5 (Anthranilate phosphoribosyltransferase OS=Xanthomonas campestris pv. vesicatoria (strain 85-10) GN=trpD PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.027e-18 Identity = 51/90 (56.67%), Postives = 58/90 (64.44%), Query Frame = 2 Query: 407 VDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKVVRPV 676 VDIVGTGGDG++T NIST A +AAA GAKVAK D LEALG VI+L PE V + GIGFM + +HPAMKVV PV Sbjct: 80 VDIVGTGGDGSDTFNISTCAMFVAAAGGAKVAKHGNRSVSSKSGSADALEALGAVIELQPEQVASALAHTGIGFMYAPVHHPAMKVVAPV 169 The following BLAST results are available for this feature:
BLAST of FC930840 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930840 ID=FC930840; Name=FC930840; organism=Citrus clementina; type=EST; length=676bpback to top |