FC930840

Overview
NameFC930840
Unique NameFC930840
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length676
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930840 vs. ExPASy Swiss-Prot
Match: TRPD_XANAC (Anthranilate phosphoribosyltransferase OS=Xanthomonas axonopodis pv. citri GN=trpD PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.027e-18
Identity = 51/90 (56.67%), Postives = 58/90 (64.44%), Query Frame = 2
Query:  407 VDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKVVRPV 676
            VDIVGTGGDG++T NIST A  +AAA GAKVAK             D LEALG VI+L PE V   +   GIGFM +  +HPAMKVV PV
Sbjct:   80 VDIVGTGGDGSHTFNISTCAMFVAAAGGAKVAKHGNRSVSSKSGSADALEALGAVIELQPEQVASALAHTGIGFMYAPVHHPAMKVVAPV 169          
BLAST of FC930840 vs. ExPASy Swiss-Prot
Match: TRPD_NOCFA (Anthranilate phosphoribosyltransferase OS=Nocardia farcinica GN=trpD PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.027e-18
Identity = 51/103 (49.51%), Postives = 63/103 (61.17%), Query Frame = 2
Query:  353 LERAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMK 661
            L   M ++A  V   GDAVDIVGTGGD + +VNIST +SI+ AA G  V K             DVLEALGV ++L PE V RCV E GIGF  +  +HPA++
Sbjct:   53 LATGMFEHARLVSIDGDAVDIVGTGGDRSGSVNISTMSSIVVAAAGVPVVKHGNRAASSKSGGADVLEALGVRLNLGPEAVARCVREVGIGFCFAPVFHPALR 155          
BLAST of FC930840 vs. ExPASy Swiss-Prot
Match: TRPD2_RALSO (Anthranilate phosphoribosyltransferase 2 OS=Ralstonia solanacearum GN=trpD2 PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.342e-18
Identity = 50/105 (47.62%), Postives = 60/105 (57.14%), Query Frame = 2
Query:  362 AMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKVVRPV 676
            AM      V+   DAVDIVGTGGD A T NIST A+ + A  G  VAK             DVL ALGV +D  P  + RC+ EAGIGFM +  +HPA+K + PV
Sbjct:   62 AMRARMVPVKAPADAVDIVGTGGDNAGTYNISTCAAFIVAGAGVPVAKHGNRALSSKSGAADVLSALGVNLDQTPADIERCIAEAGIGFMFAPTHHPALKQLMPV 166          
BLAST of FC930840 vs. ExPASy Swiss-Prot
Match: TRPD_HALLT (Anthranilate phosphoribosyltransferase OS=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) GN=trpD PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 1.629e-18
Identity = 36/87 (41.38%), Postives = 50/87 (57.47%), Query Frame = 2
Query:  407 VDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKVV 667
            VD  GTGGD  +T+N+ST A+I+AA  G  +AK             DVLE  G  ++ +P  V   ++  GIGFM++  +HPAMK V
Sbjct:   76 VDTCGTGGDDYDTINVSTTAAIVAAGAGVPIAKHGNYSVSSSSGSADVLEVAGADVEAEPPAVEEAIETDGIGFMLAPVFHPAMKAV 162          

HSP 2 Score: 38.1206 bits (87), Expect = 1.629e-18
Identity = 21/50 (42.00%), Postives = 28/50 (56.00%), Query Frame = 1
Query:  211 NELIDCLISRVDLTEAEAQASLDYLLNEADEALISAFLVLLRAKGETFGE 360
            N+ ++ +    DLT  EA+ +   +  EA EA I A L  LRAKGET  E
Sbjct:    4 NDTVERVTDGADLTVDEAREAARLVFEEATEAQIGALLAALRAKGETEAE 53          
BLAST of FC930840 vs. ExPASy Swiss-Prot
Match: TRPD_MOOTA (Anthranilate phosphoribosyltransferase OS=Moorella thermoacetica (strain ATCC 39073) GN=trpD PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.631e-18
Identity = 39/85 (45.88%), Postives = 50/85 (58.82%), Query Frame = 2
Query:  407 VDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMK 661
            VD  GTGGDG  T NIST A+ + A  G  VAK             D+LEALG+ +DL P+ V RC+DE G+ F+ +  +H AMK
Sbjct:   76 VDTCGTGGDGRQTFNISTTAAFVVAGAGVAVAKHGNRSVSSRCGSADMLEALGIKVDLPPDAVARCLDEVGMAFLFAPVFHGAMK 160          

HSP 2 Score: 33.4982 bits (75), Expect = 1.631e-18
Identity = 20/48 (41.67%), Postives = 29/48 (60.42%), Query Frame = 1
Query:  220 IDCLISRVDLTEAEAQASLDYLL-NEADEALISAFLVLLRAKGETFGE 360
            I  +++   L+EAEA  ++D ++  EA  A I+AFL  LR KGE   E
Sbjct:    6 ISKVVAGQHLSEAEAAEAMDIIMAGEATPAQIAAFLTALRLKGEMVDE 53          
BLAST of FC930840 vs. ExPASy Swiss-Prot
Match: TRPD_XANOP (Anthranilate phosphoribosyltransferase OS=Xanthomonas oryzae pv. oryzae (strain PXO99A) GN=trpD PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.752e-18
Identity = 50/90 (55.56%), Postives = 59/90 (65.56%), Query Frame = 2
Query:  407 VDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKVVRPV 676
            VDIVGTGGDG++T NIST A  +AAA GAKVAK             D LEALG VI+L PE V   + + GIGFM +  +HP+MKVV PV
Sbjct:   80 VDIVGTGGDGSHTFNISTCAMFVAAAGGAKVAKHGNRSVSSKSGSADALEALGAVIELQPEQVADALAQTGIGFMYAPLHHPSMKVVAPV 169          
BLAST of FC930840 vs. ExPASy Swiss-Prot
Match: TRPD_XANOM (Anthranilate phosphoribosyltransferase OS=Xanthomonas oryzae pv. oryzae (strain MAFF 311018) GN=trpD PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.752e-18
Identity = 50/90 (55.56%), Postives = 59/90 (65.56%), Query Frame = 2
Query:  407 VDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKVVRPV 676
            VDIVGTGGDG++T NIST A  +AAA GAKVAK             D LEALG VI+L PE V   + + GIGFM +  +HP+MKVV PV
Sbjct:   80 VDIVGTGGDGSHTFNISTCAMFVAAAGGAKVAKHGNRSVSSKSGSADALEALGAVIELQPEQVADALAQTGIGFMYAPLHHPSMKVVAPV 169          
BLAST of FC930840 vs. ExPASy Swiss-Prot
Match: TRPD_MYCVP (Anthranilate phosphoribosyltransferase OS=Mycobacterium vanbaalenii (strain DSM 7251 / PYR-1) GN=trpD PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.752e-18
Identity = 56/127 (44.09%), Postives = 74/127 (58.27%), Query Frame = 2
Query:  290 MKLMRP*LVLFLFCSEPKEKHLERAMIKYATKV--EGLGDA-VDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMK 661
            MK+ RP        +  +   L   M+K+A +V  + +G A VDIVGTGGDGANTVN+ST A+I+ AA G  V K             D LEALG+ IDL P+ V RCV E GIGF  + ++HP+ +
Sbjct:   63 MKMKRP--------TSAEVTELADIMLKHARRVPTDVIGTATVDIVGTGGDGANTVNLSTMAAIVVAAAGVPVVKHGNRAASSLSGGADTLEALGLRIDLGPDEVARCVAEVGIGFAFAPQFHPSYR 181          
BLAST of FC930840 vs. ExPASy Swiss-Prot
Match: TRPD_MYCGI (Anthranilate phosphoribosyltransferase OS=Mycobacterium gilvum (strain PYR-GCK) GN=trpD PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.752e-18
Identity = 56/127 (44.09%), Postives = 72/127 (56.69%), Query Frame = 2
Query:  290 MKLMRP*LVLFLFCSEPKEKHLERAMIKYATKV--EGLGD-AVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMK 661
            MK+ RP        +  +   L   M+K+A  V  + +G   VDIVGTGGDGANTVN+ST ASI+ AA G  V K             D LEALG+ IDL P+ V RCV E GIGF  + ++HP+ +
Sbjct:   63 MKMKRP--------TSAEVTELAEIMLKHALPVPTDTIGTHTVDIVGTGGDGANTVNLSTMASIVVAAAGVPVVKHGNRAASSLSGGADTLEALGLRIDLGPDDVARCVAEVGIGFAFAPQFHPSYR 181          
BLAST of FC930840 vs. ExPASy Swiss-Prot
Match: TRPD_LARHH (Anthranilate phosphoribosyltransferase OS=Laribacter hongkongensis (strain HLHK9) GN=trpD PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.752e-18
Identity = 48/90 (53.33%), Postives = 57/90 (63.33%), Query Frame = 2
Query:  407 VDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKVVRPV 676
            VD  GTGGDGA+T NIST A+ + AA GA+VAK             DVLEALGV + L  E V RC+DE G+GFM +  +H AMK V PV
Sbjct:   79 VDTCGTGGDGAHTFNISTTAAFIVAAAGAQVAKHGGRSVSSSSGSADVLEALGVKLALSAENVGRCIDEIGLGFMFAPNHHTAMKYVAPV 168          
The following BLAST results are available for this feature:
BLAST of FC930840 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TRPD_XANAC1.027e-1856.67Anthranilate phosphoribosyltransferase OS=Xanthomo... [more]
TRPD_NOCFA1.027e-1849.51Anthranilate phosphoribosyltransferase OS=Nocardia... [more]
TRPD2_RALSO1.342e-1847.62Anthranilate phosphoribosyltransferase 2 OS=Ralsto... [more]
TRPD_HALLT1.629e-1841.38Anthranilate phosphoribosyltransferase OS=Halorubr... [more]
TRPD_MOOTA1.631e-1845.88Anthranilate phosphoribosyltransferase OS=Moorella... [more]
TRPD_XANOP1.752e-1855.56Anthranilate phosphoribosyltransferase OS=Xanthomo... [more]
TRPD_XANOM1.752e-1855.56Anthranilate phosphoribosyltransferase OS=Xanthomo... [more]
TRPD_MYCVP1.752e-1844.09Anthranilate phosphoribosyltransferase OS=Mycobact... [more]
TRPD_MYCGI1.752e-1844.09Anthranilate phosphoribosyltransferase OS=Mycobact... [more]
TRPD_LARHH1.752e-1853.33Anthranilate phosphoribosyltransferase OS=Laribact... [more]

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Properties
Property NameValue
Genbank descriptionC34109F02EF PostHarvP1 Citrus clementina cDNA clone C34109F02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930840 ID=FC930840; Name=FC930840; organism=Citrus clementina; type=EST; length=676bp
AAAATGACAATGAGAGCGTTGTTGAATTTAACTGCAGTTTCTTCCTCTCC
ATTTAATAATAATCACCCAAATCACCGGCCTTCCTTACCGTCGCTTCGAA
ACTGTGGATTTACGACTGCGGGTAATAATCCGAGATGCAGAGAATTAACT
GCTATTCAAACCCCTCAGCCGGCTGTTTCTGATAATACTCGTCCTCTAAC
GCCCTGCTTTAATGAGTTGATCGATTGCTTGATAAGTCGAGTGGATTTAA
CGGAGGCGGAGGCTCAAGCTTCGCTGGATTATTTGTTGAATGAAGCTGAT
GAGGCCTTGATTAGTGCTTTTCTTGTTTTGCTCAGAGCCAAAGGAGAAAC
ATTTGGAGAGGGCGATGATAAAGTATGCTACGAAGGTGGAAGGGCTGGGT
GATGCAGTTGACATTGTGGGTACAGGAGGTGATGGTGCAAACACAGTGAA
CATTTCAACTGGTGCTTCAATTCTTGCTGCAGCTTGTGGTGCAAAAGTTG
CCAAGCAAGGGAGTCGGTCTAGTTCTTCTGCATGTGGAAGTGCTGATGTG
TTAGAAGCTTTGGGTGTCGTTATTGACTTGGACCCAGAGGGTGTAAGAAG
GTGTGTGGATGAGGCAGGAATTGGTTTCATGATGTCGACNAAGTATCACC
CTGCAATGAAAGTTGTCAGGCCAGTG
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