FC930841

Overview
NameFC930841
Unique NameFC930841
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length699
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930841 vs. ExPASy Swiss-Prot
Match: PMM2_HUMAN (Phosphomannomutase 2 OS=Homo sapiens GN=PMM2 PE=1 SV=1)

HSP 1 Score: 253.062 bits (645), Expect = 1.085e-66
Identity = 124/211 (58.77%), Postives = 160/211 (75.83%), Query Frame = 1
Query:   76 LALFDVDGTLTAPRKAATPQMLEFMRELRKVVTVGVVGGSDLSKISEQLGKTVIDEYDYVFSENGLVAHKDGKLIGTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNISPIGRNCSQEERDEFERYDKIHNIRPKMVSVLREKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYLDDFNEFTLL---GTNLQGGNDH 699
            L LFDVDGTLTAPR+  T +M +F+++LR+ + +GVVGGSD  K+ EQLG  V+++YDYVF ENGLVA+KDGKL+  Q+++S LG   +++ IN+ L YIA + +P KRGTFIEFR+GMLN+SPIGR+CSQEER EF   DK  NIR K V+ LR++FA   LTFSIGGQISFDVFP GWDK YCLR++++    T+       + GGNDH
Sbjct:    8 LCLFDVDGTLTAPRQKITKEMDDFLQKLRQKIKIGVVGGSDFEKVQEQLGNDVVEKYDYVFPENGLVAYKDGKLLCRQNIQSHLGEALIQDLINYCLSYIAKIKLPKKRGTFIEFRNGMLNVSPIGRSCSQEERIEFYELDKKENIRQKFVADLRKEFAGKGLTFSIGGQISFDVFPDGWDKRYCLRHVENDGYKTIYFFGDKTMPGGNDH 218          
BLAST of FC930841 vs. ExPASy Swiss-Prot
Match: PMM2_MACFA (Phosphomannomutase 2 OS=Macaca fascicularis GN=PMM2 PE=2 SV=1)

HSP 1 Score: 252.677 bits (644), Expect = 1.418e-66
Identity = 124/211 (58.77%), Postives = 160/211 (75.83%), Query Frame = 1
Query:   76 LALFDVDGTLTAPRKAATPQMLEFMRELRKVVTVGVVGGSDLSKISEQLGKTVIDEYDYVFSENGLVAHKDGKLIGTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNISPIGRNCSQEERDEFERYDKIHNIRPKMVSVLREKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYLDDFNEFTLL---GTNLQGGNDH 699
            L LFDVDGTLTAPR+  T +M +F+++LR+ + +GVVGGSD  K+ EQLG  V+++YDYVF ENGLVA+KDGKL+  Q+++S LG   +++ IN+ L YIA + +P KRGTFIEFR+GMLN+SPIGR+CSQEER EF   DK  NIR K V+ LR++FA   LTFSIGGQISFDVFP GWDK YCLR++++    T+       + GGNDH
Sbjct:    8 LCLFDVDGTLTAPRQKITKEMDDFLQKLRQKIKIGVVGGSDFEKVQEQLGNDVVEKYDYVFPENGLVAYKDGKLLCKQNIQSHLGEALIQDLINYCLSYIAKVKLPKKRGTFIEFRNGMLNVSPIGRSCSQEERIEFYELDKKENIRQKFVADLRKEFAGKGLTFSIGGQISFDVFPDGWDKRYCLRHVENDGYKTIYFFGDKTMPGGNDH 218          
BLAST of FC930841 vs. ExPASy Swiss-Prot
Match: PMM2_MOUSE (Phosphomannomutase 2 OS=Mus musculus GN=Pmm2 PE=2 SV=1)

HSP 1 Score: 246.514 bits (628), Expect = 1.016e-64
Identity = 121/211 (57.35%), Postives = 158/211 (74.88%), Query Frame = 1
Query:   76 LALFDVDGTLTAPRKAATPQMLEFMRELRKVVTVGVVGGSDLSKISEQLGKTVIDEYDYVFSENGLVAHKDGKLIGTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNISPIGRNCSQEERDEFERYDKIHNIRPKMVSVLREKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYLDDFNEFTLL---GTNLQGGNDH 699
            L LFD+DGTLTAPR+  T +M  F+++LR+   +GVVGGSD  K+ EQLG  V+++YDYVF ENGLVA+KDGKL+  Q+++  LG + +++ IN+ L YIA++ +P KRGTFIEFR+GMLN+SPIGR+CSQEER EF   DK  +IR K V+ LR++FA   LTFSIGGQIS DVFP+GWDK YCLR+L+     T+       + GGNDH
Sbjct:    4 LCLFDMDGTLTAPRQKITEEMDGFLQKLRQKTKIGVVGGSDFEKLQEQLGNDVVEKYDYVFPENGLVAYKDGKLLCKQNIQGHLGEDVIQDLINYCLSYIANIKLPKKRGTFIEFRNGMLNVSPIGRSCSQEERIEFYELDKKEHIRQKFVADLRKEFAGKGLTFSIGGQISIDVFPEGWDKRYCLRHLEHAGYKTIYFFGDKTMPGGNDH 214          
BLAST of FC930841 vs. ExPASy Swiss-Prot
Match: PMM2_BOVIN (Phosphomannomutase 2 OS=Bos taurus GN=PMM2 PE=2 SV=1)

HSP 1 Score: 241.506 bits (615), Expect = 3.268e-63
Identity = 122/211 (57.82%), Postives = 153/211 (72.51%), Query Frame = 1
Query:   76 LALFDVDGTLTAPRKAATPQMLEFMRELRKVVTVGVVGGSDLSKISEQLGKTVIDEYDYVFSENGLVAHKDGKLIGTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNISPIGRNCSQEERDEFERYDKIHNIRPKMVSVLREKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYL--DDFNEFTLLG-TNLQGGNDH 699
            L LFDVDGTLTAPR+  T  M  F+++LR+ + +GVVGGSD  K+ EQLG  VI +YDYVF ENGLVA++DGKL+  Q+++  LG   +++ IN+ L YIA + +P KRGTFIEFR+GMLN+SPIGR+CSQEER EF   D+  NIR K V  LR++FA   LTFSIGGQISFDVFP GWDK YCL ++  D +      G   + GGNDH
Sbjct:    8 LCLFDVDGTLTAPRQKITKDMDCFLQKLRQKIKIGVVGGSDFEKVQEQLGDDVIKKYDYVFPENGLVAYRDGKLLCKQNIQGHLGEALIQDLINYCLSYIAKIKLPKKRGTFIEFRNGMLNVSPIGRSCSQEERIEFYELDQKENIRQKFVEDLRKEFAGKGLTFSIGGQISFDVFPDGWDKRYCLGHVEKDGYKTIYFFGDKTMPGGNDH 218          
BLAST of FC930841 vs. ExPASy Swiss-Prot
Match: PMM_DROME (Probable phosphomannomutase OS=Drosophila melanogaster GN=CG10688 PE=2 SV=1)

HSP 1 Score: 241.121 bits (614), Expect = 4.268e-63
Identity = 117/224 (52.23%), Postives = 161/224 (71.88%), Query Frame = 1
Query:   46 TPMAARKQGLLALFDVDGTLTAPRKAATPQMLEFM-RELRKVVTVGVVGGSDLSKISEQL-GKTVIDEYDYVFSENGLVAHKDGKLIGTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNISPIGRNCSQEERDEFERYDKIHNIRPKMVSVLREKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYLD---DFNEFTLLGTNLQ-GGNDH 699
            T  A ++  +L LFDVDGTLT PR   TP+  EF    ++   T+G+VGGSDL K+ EQL G+ +++E+D++F ENGLV  + GK +G Q++   LG E +K FINF L Y+++LD+PIKRGTFIEFR+GM+N+ PIGR C++EER+ F  YD  H +R KM+  L+++FA ++LT+SIGGQISFDVFP GWDKTYCLR+++    F E    G   + GGND+
Sbjct:    2 TTAALKRDEILLLFDVDGTLTMPRSVVTPEFEEFFYSRVKPRATIGIVGGSDLEKMFEQLNGRKILNEFDFIFPENGLVQIEGGKEVGKQNIIMHLGEETVKRFINFVLRYLSELDVPIKRGTFIEFRNGMMNVCPIGRQCTREERNMFAEYDIEHKVREKMIKDLKQEFADVDLTYSIGGQISFDVFPHGWDKTYCLRHIEAHYKFKEIHFFGDKTEPGGNDY 225          
BLAST of FC930841 vs. ExPASy Swiss-Prot
Match: PMM_CANAL (Phosphomannomutase OS=Candida albicans GN=PMM1 PE=1 SV=1)

HSP 1 Score: 236.498 bits (602), Expect = 1.051e-61
Identity = 112/211 (53.08%), Postives = 157/211 (74.41%), Query Frame = 1
Query:   76 LALFDVDGTLTAPRKAATPQMLEFMRELRKVVTVGVVGGSDLSKISEQLGKTVIDEYDYVFSENGLVAHKDGKLIGTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNISPIGRNCSQEERDEFERYDKIHNIRPKMVSVLREKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYLDD--FNEFTLLG-TNLQGGNDH 699
            L LFDVDGTLT  R   + +M + + +LR+ V +G VGGSDLSK  EQLG  V++++DY FSENGL A+K GK + +QS  +++G EK  + + F L Y++D+D+PI+RGTFIEFR+GM+N+SPIGRN S +ER+++E++DK H+IR  MV  L+++F    LT+SIGGQISFDVFP GWDKTYCL++++D  F      G  + +GGND+
Sbjct:   12 LVLFDVDGTLTPARLTISEEMKKTLEKLREKVVIGFVGGSDLSKQVEQLGPNVLNDFDYCFSENGLTAYKLGKELASQSFINWIGNEKYNKLVKFILRYLSDIDLPIRRGTFIEFRNGMINVSPIGRNASTQERNDYEKFDKQHHIRETMVEALKKEFPDFGLTYSIGGQISFDVFPTGWDKTYCLQHVEDEHFENIHFFGDKSYKGGNDY 222          
BLAST of FC930841 vs. ExPASy Swiss-Prot
Match: PMM_YEAST (Phosphomannomutase OS=Saccharomyces cerevisiae GN=SEC53 PE=1 SV=1)

HSP 1 Score: 233.802 bits (595), Expect = 6.814e-61
Identity = 117/215 (54.42%), Postives = 152/215 (70.70%), Query Frame = 1
Query:   64 KQGLLALFDVDGTLTAPRKAATPQMLEFMRELRKVVTVGVVGGSDLSKISEQLGKTVIDEYDYVFSENGLVAHKDGKLIGTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNISPIGRNCSQEERDEFERYDKIHNIRPKMVSVLREKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYL--DDFNEFTLLG-TNLQGGNDH 699
            K   L LFDVDGTLT  R   + ++ + + +LR    +G VGGSDLSK  EQLG  V+DE+DY FSENGL A++ GK + +QS  ++LG EK  +   F L Y++++D+P +RGTF+EFR+GM+N+SPIGRN S EER+EFERYDK H IR K V  L+++F    LTFSIGGQISFDVFP GWDKTYCL+++  D F E    G   + GGND+
Sbjct:   11 KPETLVLFDVDGTLTPARLTVSEEVRKTLAKLRNKCCIGFVGGSDLSKQLEQLGPNVLDEFDYSFSENGLTAYRLGKELASQSFINWLGEEKYNKLAVFILRYLSEIDLPKRRGTFLEFRNGMINVSPIGRNASTEERNEFERYDKEHQIRAKFVEALKKEFPDYGLTFSIGGQISFDVFPAGWDKTYCLQHVEKDGFKEIHFFGDKTMVGGNDY 225          
BLAST of FC930841 vs. ExPASy Swiss-Prot
Match: PMM1_MOUSE (Phosphomannomutase 1 OS=Mus musculus GN=Pmm1 PE=2 SV=1)

HSP 1 Score: 226.483 bits (576), Expect = 1.088e-58
Identity = 119/219 (54.34%), Postives = 154/219 (70.32%), Query Frame = 1
Query:   55 AARKQGLLALFDVDGTLTAPRKAATPQMLEFMRELRKVVTVGVVGGSDLSKISEQLGK--TVIDEYDYVFSENGLVAHKDGKLIGTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNISPIGRNCSQEERDEFERYDKIHNIRPKMVSVLREKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYLDD--FNEFTLLGTNLQ-GGND 696
            A RK+ +L LFDVDGTLT  R+   P++  F+++LR  V +GVVGGSD SKI+EQLG+   VI+++DYVF+ENG V +K G+L+  Q++++ LG E L++ INF L Y+A L +P KRGTFIEFR+GMLN+SPIGR+C+ EER EF   DK   IR K V  L+ +FA   L FS GG ISFDVFP+GWDK YCL  LD+  F+     G     GGND
Sbjct:    8 ARRKERILCLFDVDGTLTPARQKIDPEVSAFLQKLRSRVQIGVVGGSDYSKIAEQLGEGDEVIEKFDYVFAENGTVQYKHGRLLSKQTIQNHLGEELLQDLINFCLSYMALLRLPKKRGTFIEFRNGMLNVSPIGRSCTLEERIEFSELDKKEKIREKFVEALKTEFAGKGLRFSRGGMISFDVFPEGWDKRYCLDSLDEDSFDIIHFFGNETSPGGND 226          
BLAST of FC930841 vs. ExPASy Swiss-Prot
Match: PMM1_HUMAN (Phosphomannomutase 1 OS=Homo sapiens GN=PMM1 PE=1 SV=2)

HSP 1 Score: 224.172 bits (570), Expect = 5.399e-58
Identity = 119/219 (54.34%), Postives = 151/219 (68.95%), Query Frame = 1
Query:   55 AARKQGLLALFDVDGTLTAPRKAATPQMLEFMRELRKVVTVGVVGGSDLSKISEQLGK--TVIDEYDYVFSENGLVAHKDGKLIGTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNISPIGRNCSQEERDEFERYDKIHNIRPKMVSVLREKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYL--DDFNEFTLLGTNLQ-GGND 696
            A RK+ +L LFDVDGTLT  R+   P++  F+++LR  V +GVVGGSD  KI+EQLG    VI+++DYVF+ENG V +K G+L+  Q++++ LG E L++ INF L Y+A L +P KRGTFIEFR+GMLNISPIGR+C+ EER EF   DK   IR K V  L+ +FA   L FS GG ISFDVFP+GWDK YCL  L  D F+     G     GGND
Sbjct:    8 ARRKERVLCLFDVDGTLTPARQKIDPEVAAFLQKLRSRVQIGVVGGSDYCKIAEQLGDGDEVIEKFDYVFAENGTVQYKHGRLLSKQTIQNHLGEELLQDLINFCLSYMALLRLPKKRGTFIEFRNGMLNISPIGRSCTLEERIEFSELDKKEKIREKFVEALKTEFAGKGLRFSRGGMISFDVFPEGWDKRYCLDSLDQDSFDTIHFFGNETSPGGND 226          
BLAST of FC930841 vs. ExPASy Swiss-Prot
Match: PMM_ENCCU (Phosphomannomutase OS=Encephalitozoon cuniculi GN=SEC53 PE=1 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 4.730e-54
Identity = 105/217 (48.39%), Postives = 144/217 (66.36%), Query Frame = 1
Query:   58 ARKQGLLALFDVDGTLTAPRKAATPQMLEFMRELRKVVTVGVVGGSDLSKISEQLGKTVIDEYDYVFSENGLVAHKDGKLIGTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNISPIGRNCSQEERDEFERYDKIHNIRPKMVSVLREKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYLDD---FNEFTLLGTNLQGGNDH 699
            AR +  + LFDVDGTL+  R     +M + +  LR+ V +G VGGSDL+K  EQ+G  +++ +DY F ENG+  +K+G L   + +   LG E  KEF NF L Y++D+D+PIKRG FIE+R+ M+NISPIGRNCS+EER +F   DK    R KMV+ +R++F    L FSIGGQIS D FP+GWDKTYCLR++      N +      ++GGND+
Sbjct:    2 ARDEKTIFLFDVDGTLSESRAKMPEKMGKMLESLRRKVRIGFVGGSDLAKQKEQVGDNILEIFDYGFPENGVSFYKNGTLESQEKIIDVLGEEFYKEFANFVLRYLSDIDLPIKRGNFIEYRNSMINISPIGRNCSREERMKFFELDKKEKFREKMVTAMRDRFKDSCLVFSIGGQISIDCFPKGWDKTYCLRHIKKEGVENVYFFGDMTMEGGNDY 218          
The following BLAST results are available for this feature:
BLAST of FC930841 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 22
Match NameE-valueIdentityDescription
PMM2_HUMAN1.085e-6658.77Phosphomannomutase 2 OS=Homo sapiens GN=PMM2 PE=1 ... [more]
PMM2_MACFA1.418e-6658.77Phosphomannomutase 2 OS=Macaca fascicularis GN=PMM... [more]
PMM2_MOUSE1.016e-6457.35Phosphomannomutase 2 OS=Mus musculus GN=Pmm2 PE=2 ... [more]
PMM2_BOVIN3.268e-6357.82Phosphomannomutase 2 OS=Bos taurus GN=PMM2 PE=2 SV... [more]
PMM_DROME4.268e-6352.23Probable phosphomannomutase OS=Drosophila melanoga... [more]
PMM_CANAL1.051e-6153.08Phosphomannomutase OS=Candida albicans GN=PMM1 PE=... [more]
PMM_YEAST6.814e-6154.42Phosphomannomutase OS=Saccharomyces cerevisiae GN=... [more]
PMM1_MOUSE1.088e-5854.34Phosphomannomutase 1 OS=Mus musculus GN=Pmm1 PE=2 ... [more]
PMM1_HUMAN5.399e-5854.34Phosphomannomutase 1 OS=Homo sapiens GN=PMM1 PE=1 ... [more]
PMM_ENCCU4.730e-5448.39Phosphomannomutase OS=Encephalitozoon cuniculi GN=... [more]

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Properties
Property NameValue
Genbank descriptionC34109F03EF PostHarvP1 Citrus clementina cDNA clone C34109F03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930841 ID=FC930841; Name=FC930841; organism=Citrus clementina; type=EST; length=699bp
GACGCTATTCATTCACTTCTATTCAGATAAATCTATACATTTCAAACTCC
AATGGCTGCTAGGAAGCAAGGTTTATTAGCTCTCTTTGATGTTGACGGAA
CTCTCACGGCTCCGAGAAAGGCGGCAACACCACAAATGTTAGAGTTCATG
CGGGAACTGAGAAAGGTTGTTACAGTTGGAGTCGTCGGTGGATCTGATCT
TTCTAAGATATCAGAGCAGCTTGGGAAGACAGTTATTGATGAATACGATT
ATGTGTTTTCTGAGAATGGTCTTGTGGCTCATAAGGATGGGAAATTAATT
GGCACACAGAGCTTGAAATCATTTCTTGGAGGCGAAAAGCTCAAGGAATT
CATAAATTTTACTCTTCATTACATTGCTGACTTGGACATTCCAATTAAAA
GGGGAACTTTCATTGAATTCCGAAGTGGGATGCTTAATATTTCACCAATT
GGGCGAAACTGCAGCCAAGAAGAAAGGGACGAGTTTGAGAGGTATGACAA
GATTCACAATATACGGCCAAAAATGGTATCTGTGCTTCGGGAGAAGTTTG
CTCACCTTAACTTGACATTTTCAATTGGAGGACAGATAAGCTTTGATGTG
TTTCCCCAGGGATGGGACAAGACATACTGCTTGAGATACCTTGATGACTT
CAATGAATTCACTCTTTTGGGGACAAACTTACAGGGAGGGAATGATCAT
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