FC930842
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930842 vs. ExPASy Swiss-Prot
Match: DXR_NOSP7 (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=dxr PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 5.668e-17 Identity = 37/75 (49.33%), Postives = 60/75 (80.00%), Query Frame = 3 Query: 411 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEESP 635 K I+++GSTGSIGTQTLDIV ++ D+FR+V LAAG+N+ +LA Q+++F+P++ A+ +E L +KEA+ +++ P Sbjct: 2 KAITLVGSTGSIGTQTLDIVTQYPDQFRIVGLAAGNNVEMLAAQIRQFRPKIAAICSEDKLPALKEAIIDLDPQP 76 HSP 2 Score: 23.0978 bits (48), Expect = 5.668e-17 Identity = 10/15 (66.67%), Postives = 12/15 (80.00%), Query Frame = 2 Query: 629 KPEILAGEQGVIEAA 673 +P +LAGE GVIE A Sbjct: 75 QPILLAGEAGVIEVA 89
BLAST of FC930842 vs. ExPASy Swiss-Prot
Match: DXR_CYAP8 (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Cyanothece sp. (strain PCC 8801) GN=dxr PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 7.296e-17 Identity = 42/75 (56.00%), Postives = 61/75 (81.33%), Query Frame = 3 Query: 411 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEESP 635 K I++LGSTGSIGTQTLDIV ++ D+F+VV LA +N LLA Q+K+F+P++VA+ ES L+ IK+A+A+++ SP Sbjct: 2 KKITILGSTGSIGTQTLDIVQQYPDQFQVVGLATRNNGELLAQQIKQFRPEIVAICQESQLNTIKDAIASLDYSP 76
BLAST of FC930842 vs. ExPASy Swiss-Prot
Match: DXR_SYNJA (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Synechococcus sp. (strain JA-3-3Ab) GN=dxr PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 9.529e-17 Identity = 42/78 (53.85%), Postives = 58/78 (74.36%), Query Frame = 3 Query: 417 ISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEESPRFWPG 650 I++LGSTGSIGTQTLD+VA++ ++FRVV L + SN+TLLA+QV RF+PQ+VA+ E LL E++ L + P G Sbjct: 4 ITLLGSTGSIGTQTLDLVAQYPERFRVVGLTSYSNVTLLAEQVWRFRPQIVAIGREELLPELRSLLTGMRPLPELVAG 81
BLAST of FC930842 vs. ExPASy Swiss-Prot
Match: DXR_SYNP6 (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=dxr PE=1 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.625e-16 Identity = 37/80 (46.25%), Postives = 63/80 (78.75%), Query Frame = 3 Query: 411 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEESPRFWPG 650 K +++LGSTGSIGTQTLDI+ ++ D+FR+V LAAG N+ LL++Q++R +P++VA+++ + L E++ A+A+++ P G Sbjct: 2 KAVTLLGSTGSIGTQTLDILEQYPDRFRLVGLAAGRNVALLSEQIRRHRPEIVAIQDAAQLSELQAAIADLDNPPLILTG 81
BLAST of FC930842 vs. ExPASy Swiss-Prot
Match: DXR_SYNE7 (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Synechococcus elongatus (strain PCC 7942) GN=dxr PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.625e-16 Identity = 37/80 (46.25%), Postives = 63/80 (78.75%), Query Frame = 3 Query: 411 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEESPRFWPG 650 K +++LGSTGSIGTQTLDI+ ++ D+FR+V LAAG N+ LL++Q++R +P++VA+++ + L E++ A+A+++ P G Sbjct: 2 KAVTLLGSTGSIGTQTLDILEQYPDRFRLVGLAAGRNVALLSEQIRRHRPEIVAIQDAAQLSELQAAIADLDNPPLILTG 81
BLAST of FC930842 vs. ExPASy Swiss-Prot
Match: DXR_SYNS9 (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Synechococcus sp. (strain CC9902) GN=dxr PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.123e-16 Identity = 43/76 (56.58%), Postives = 59/76 (77.63%), Query Frame = 3 Query: 411 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEESPR 638 K ISVLGSTGSIGTQTL IV + D+FRVVAL AG N+ LL +Q++R +P++VA+ +E+LL E+K+ L ++ S R Sbjct: 2 KAISVLGSTGSIGTQTLQIVDDFPDQFRVVALTAGRNLALLVEQIQRHQPELVALADEALLPELKQRLEALDPSDR 77
BLAST of FC930842 vs. ExPASy Swiss-Prot
Match: DXR_THEEB (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Thermosynechococcus elongatus (strain BP-1) GN=dxr PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 2.732e-16 Identity = 39/80 (48.75%), Postives = 61/80 (76.25%), Query Frame = 3 Query: 411 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEESPRFWPG 650 K +++LGSTGSIGTQTLDIVA++ D+FRVV LAAG N+ L Q+++F+P++V++ + L E++ ALA++ + P+ G Sbjct: 20 KALNLLGSTGSIGTQTLDIVAQYPDRFRVVGLAAGRNLERLIPQIRQFQPEIVSIADPEQLPELEAALADLPQKPQLVAG 99 HSP 2 Score: 21.1718 bits (43), Expect = 2.732e-16 Identity = 7/16 (43.75%), Postives = 12/16 (75.00%), Query Frame = 2 Query: 626 RKPEILAGEQGVIEAA 673 +KP+++AGE G+ A Sbjct: 92 QKPQLVAGEAGIAAVA 107
BLAST of FC930842 vs. ExPASy Swiss-Prot
Match: DXR_SYNJB (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Synechococcus sp. GN=dxr PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 2.772e-16 Identity = 40/78 (51.28%), Postives = 58/78 (74.36%), Query Frame = 3 Query: 417 ISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEESPRFWPG 650 I++LGSTGSIGTQTLD+VA++ ++F+VV L + SN+ LLA+QV+RF+PQ+VA+ E LL E++ L + P G Sbjct: 4 ITLLGSTGSIGTQTLDLVAQYPERFQVVGLTSYSNVALLAEQVRRFRPQMVAIGREELLPELRSLLTGIRPLPELVAG 81
BLAST of FC930842 vs. ExPASy Swiss-Prot
Match: DXR_PROM5 (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Prochlorococcus marinus (strain MIT 9515) GN=dxr PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 8.066e-16 Identity = 45/86 (52.33%), Postives = 64/86 (74.42%), Query Frame = 3 Query: 411 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVE-ESPRFWPGNRESL 665 K I+VLGSTGSIGTQTL+IV E +KF+VVAL+AG NI LL +QV + KP+V+A+ +E+LL ++K + N+ +P G RE++ Sbjct: 2 KYITVLGSTGSIGTQTLEIVRELPNKFKVVALSAGRNIDLLTEQVSQHKPEVIAIDDENLLTDLKNNINNLGISNPPIVLGGREAI 87
BLAST of FC930842 vs. ExPASy Swiss-Prot
Match: DXR_PROMP (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=dxr PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.054e-15 Identity = 43/82 (52.44%), Postives = 62/82 (75.61%), Query Frame = 3 Query: 423 VLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVE-ESPRFWPGNRESL 665 +LGSTGSIGTQTL+IV+E DKF+VVAL+AG NI LL +QV + KP+V+A+ +E+LL ++K + N+ +P G RE++ Sbjct: 1 MLGSTGSIGTQTLEIVSELPDKFKVVALSAGRNIDLLTEQVSQHKPEVIAIEDENLLTDLKNNINNLGISNPPIVLGGREAI 82 The following BLAST results are available for this feature:
BLAST of FC930842 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 80
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930842 ID=FC930842; Name=FC930842; organism=Citrus clementina; type=EST; length=674bpback to top |