FC930842
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930842 vs. ExPASy Swiss-Prot
Match: DXR_GEOLS (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) GN=dxr PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 9.860e-14 Identity = 36/72 (50.00%), Postives = 54/72 (75.00%), Query Frame = 3 Query: 411 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVE 626 K I++LGSTGSIG TL+IVA H DKFRV++L+ N+ LLA Q+++F+P++ AV + + + +KE L+ VE Sbjct: 2 KQIAILGSTGSIGVSTLEIVAAHPDKFRVLSLSGAKNLDLLARQIRQFRPRLAAVADPADIPRLKELLSGVE 73
BLAST of FC930842 vs. ExPASy Swiss-Prot
Match: DXR_PROMM (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Prochlorococcus marinus (strain MIT 9313) GN=dxr PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.288e-13 Identity = 36/64 (56.25%), Postives = 52/64 (81.25%), Query Frame = 3 Query: 423 VLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEAL 614 +LGSTGSIGTQTL+I E ++FRVVAL AG+N++L+ +Q++R P+VVA+ + SLL E+K+ L Sbjct: 1 MLGSTGSIGTQTLEIAEEFPERFRVVALTAGTNVSLVVEQIQRHHPEVVALADASLLPELKQQL 64
BLAST of FC930842 vs. ExPASy Swiss-Prot
Match: DXR_PROM1 (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Prochlorococcus marinus (strain NATL1A) GN=dxr PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.288e-13 Identity = 37/76 (48.68%), Postives = 54/76 (71.05%), Query Frame = 3 Query: 411 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEESPR 638 K ISVLGSTGSIGTQTL I E D+F++VAL AG N+ L+ Q++ +P+VV++ +ESLL E+ + ++ E + Sbjct: 2 KAISVLGSTGSIGTQTLQIAEEFPDQFKIVALTAGKNLDLVTKQIETHQPEVVSLADESLLPELTRRINSLNEDSK 77
BLAST of FC930842 vs. ExPASy Swiss-Prot
Match: DXR_GEOSL (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Geobacter sulfurreducens GN=dxr PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.682e-13 Identity = 35/68 (51.47%), Postives = 52/68 (76.47%), Query Frame = 3 Query: 411 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEAL 614 K I++LGSTGSIG TL++V+ H D+FRVVAL AG+N+ +L Q++ F+PQ+V+V +E L E+ +L Sbjct: 2 KNITILGSTGSIGVSTLEVVSAHPDRFRVVALTAGNNLEMLRQQIETFRPQMVSVLSEKLAVELDRSL 69
BLAST of FC930842 vs. ExPASy Swiss-Prot
Match: DXR_PROVI (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Prosthecochloris vibrioformis (strain DSM 265) (strain DSM 265) GN=dxr PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.197e-13 Identity = 34/68 (50.00%), Postives = 50/68 (73.53%), Query Frame = 3 Query: 411 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEAL 614 + +S+LGSTGSIG TLD+V H++ F VV LA G ++ LA+Q+K F+P +V+VR+E+ DE+K L Sbjct: 2 RALSILGSTGSIGLSTLDVVRRHKESFSVVGLAEGHDVHALAEQIKEFRPTIVSVRDENAADELKTLL 69
BLAST of FC930842 vs. ExPASy Swiss-Prot
Match: DXR_PROMT (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Prochlorococcus marinus (strain NATL2A) GN=dxr PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 2.869e-13 Identity = 36/76 (47.37%), Postives = 55/76 (72.37%), Query Frame = 3 Query: 411 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEESPR 638 K ISVLGSTGSIGTQTL I E ++F++VAL AG N+ L+ Q++ +P+VV++ +ESLL E+ + ++ E+ + Sbjct: 2 KAISVLGSTGSIGTQTLQIAEEFPEQFKIVALTAGKNLDLVIKQIETHQPEVVSLADESLLSELSSRINSLTENKK 77
BLAST of FC930842 vs. ExPASy Swiss-Prot
Match: DXR_CLOD6 (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Clostridium difficile (strain 630) GN=dxr PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 2.869e-13 Identity = 39/73 (53.42%), Postives = 53/73 (72.60%), Query Frame = 3 Query: 411 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEAL-ANVE 626 K IS+LGSTGSIG QTLD+V ++ DKF +VA++A SNI LL +Q+ FKP+ V V E+ ++KE L N+E Sbjct: 2 KKISILGSTGSIGKQTLDVVRDNRDKFEIVAISANSNIELLLEQIVEFKPKYVTVFEENKALKLKEMLPKNIE 74
BLAST of FC930842 vs. ExPASy Swiss-Prot
Match: DXR_STRCO (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Streptomyces coelicolor GN=dxr PE=3 SV=3) HSP 1 Score: 75.0998 bits (183), Expect = 3.747e-13 Identity = 38/72 (52.78%), Postives = 51/72 (70.83%), Query Frame = 3 Query: 402 DGPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAA-GSNITLLADQVKRFKPQVVAVRNESLLDEIKEAL 614 DGPK + VLGSTGSIGTQ +D+V + D+FRV AL+A G + LLA+Q R K + VAV E ++ ++EAL Sbjct: 21 DGPKDVVVLGSTGSIGTQAIDLVLRNPDRFRVTALSANGGRVALLAEQAYRLKARTVAVAREDVVPALREAL 92
BLAST of FC930842 vs. ExPASy Swiss-Prot
Match: DXR_CHLPB (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Chlorobium phaeobacteroides (strain BS1) GN=dxr PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 3.747e-13 Identity = 34/70 (48.57%), Postives = 51/70 (72.86%), Query Frame = 3 Query: 411 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALAN 620 K +S+LGSTGSIG TLD+V +H +KF V LA G +I LLA+Q+K F+P +V+VR+++ ++E L + Sbjct: 2 KSLSILGSTGSIGLSTLDVVRQHPEKFNVTGLAEGHDINLLAEQIKEFRPDIVSVRDKASAGLLREQLGS 71
BLAST of FC930842 vs. ExPASy Swiss-Prot
Match: DXR_EUBE2 (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Eubacterium eligens (strain ATCC 27750 / VPI C15-48) GN=dxr PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 4.894e-13 Identity = 36/72 (50.00%), Postives = 54/72 (75.00%), Query Frame = 3 Query: 411 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVE 626 K +S+LGSTGSIGTQTLD++ + D VVALAAG+ ++ LA+QV+ FKPQ+V + E L+ E+K + +++ Sbjct: 2 KNVSILGSTGSIGTQTLDVIRRNAD-INVVALAAGTRVSDLAEQVREFKPQLVCIGKEELVPELKTLIGDMD 72 The following BLAST results are available for this feature:
BLAST of FC930842 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 80
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930842 ID=FC930842; Name=FC930842; organism=Citrus clementina; type=EST; length=674bpback to top |