FC930842
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930842 vs. ExPASy Swiss-Prot
Match: DXR_THERP (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) GN=dxr PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 8.347e-13 Identity = 36/58 (62.07%), Postives = 47/58 (81.03%), Query Frame = 3 Query: 417 ISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESL 590 +S+LGSTGSIG QTL++VA H D+FRVVALAA S I L +QV+ F+P++VA+ ESL Sbjct: 5 VSLLGSTGSIGRQTLEVVAAHPDRFRVVALAARSQIDALQEQVRIFRPELVAIAQESL 62
BLAST of FC930842 vs. ExPASy Swiss-Prot
Match: DXR_GEOMG (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=dxr PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 8.347e-13 Identity = 35/70 (50.00%), Postives = 52/70 (74.29%), Query Frame = 3 Query: 411 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALAN 620 K +++LGSTGSIGT TL+IVA H D+F+V+AL AGSN+ LL QV+ F+P++V+V L ++ L++ Sbjct: 2 KKLTILGSTGSIGTSTLEIVAAHPDRFQVIALTAGSNLELLKQQVEVFRPRLVSVLTADLARQLDRMLSD 71
BLAST of FC930842 vs. ExPASy Swiss-Prot
Match: DXR_EUBR3 (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Eubacterium rectale (strain ATCC 33656 / VPI 0990) GN=dxr PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.090e-12 Identity = 36/72 (50.00%), Postives = 54/72 (75.00%), Query Frame = 3 Query: 411 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVE 626 K IS+LGSTGSIGTQTLD++ EH D +VVAL+ G N++L+ Q + FKPQ V+V +E+ +++ +LA+ + Sbjct: 2 KKISILGSTGSIGTQTLDVIREHGD-MQVVALSCGRNLSLIEKQAREFKPQFVSVSDENDAKKLRTSLADTD 72
BLAST of FC930842 vs. ExPASy Swiss-Prot
Match: DXR_SYNPX (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Synechococcus sp. (strain WH8102) GN=dxr PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.860e-12 Identity = 35/64 (54.69%), Postives = 48/64 (75.00%), Query Frame = 3 Query: 423 VLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEAL 614 +LGSTGSIGTQTL I E ++FRVVAL AG N+ LL Q++R +P++VA+ N LL E+++ L Sbjct: 1 MLGSTGSIGTQTLQIAEEFPEQFRVVALTAGQNLDLLVQQIQRHQPELVALANADLLPELQQRL 64
BLAST of FC930842 vs. ExPASy Swiss-Prot
Match: DXR_CHLT3 (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Chloroherpeton thalassium (strain ATCC 35110 / GB-78) GN=dxr PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.860e-12 Identity = 34/69 (49.28%), Postives = 51/69 (73.91%), Query Frame = 3 Query: 411 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALA 617 K I++LGSTGSIGT +L++++ ++F L+AGSN+ LLA+Q KRF+P+ V + NESL E++ LA Sbjct: 2 KRITILGSTGSIGTNSLEVISRFPEQFCATYLSAGSNVKLLAEQAKRFRPKGVVIMNESLEGELRSLLA 70
BLAST of FC930842 vs. ExPASy Swiss-Prot
Match: DXR_BACV8 (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) GN=dxr PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.172e-12 Identity = 32/71 (45.07%), Postives = 49/71 (69.01%), Query Frame = 3 Query: 411 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANV 623 K I++LGSTGSIGTQ L ++ EH D + V AL A + + LL +Q ++F P+ V + NE ++KEAL+++ Sbjct: 3 KQIAILGSTGSIGTQALQVIEEHPDLYEVYALTANNRVDLLVEQARKFMPEAVVIANEEKYLQLKEALSDL 73
BLAST of FC930842 vs. ExPASy Swiss-Prot
Match: DXR_THEPX (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Thermoanaerobacter sp. (strain X514) GN=dxr PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.143e-12 Identity = 34/73 (46.58%), Postives = 52/73 (71.23%), Query Frame = 3 Query: 411 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEAL-ANVE 626 K + +LGSTGSIGTQTLD++ + F +V L A +N+ LL+ Q++ F P+VVAV++E ++++E L NVE Sbjct: 2 KKVIILGSTGSIGTQTLDVIKNFRENFEIVGLTAYNNVELLSKQIREFNPKVVAVKDEDKANQLRENLKKNVE 74
BLAST of FC930842 vs. ExPASy Swiss-Prot
Match: DXR_THEP3 (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) GN=dxr PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.143e-12 Identity = 34/73 (46.58%), Postives = 52/73 (71.23%), Query Frame = 3 Query: 411 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEAL-ANVE 626 K + +LGSTGSIGTQTLD++ + F +V L A +N+ LL+ Q++ F P+VVAV++E ++++E L NVE Sbjct: 2 KKVIILGSTGSIGTQTLDVIKNFRENFEIVGLTAYNNVELLSKQIREFNPKVVAVKDEDKANQLRENLKKNVE 74
BLAST of FC930842 vs. ExPASy Swiss-Prot
Match: DXR_PELLD (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Pelodictyon luteolum (strain DSM 273) GN=dxr PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.143e-12 Identity = 30/68 (44.12%), Postives = 49/68 (72.06%), Query Frame = 3 Query: 411 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEAL 614 + +S+LGSTGSIG TLD+V +H D+F++V LA G ++ +LA+Q++ F P +V+VR+ + +K L Sbjct: 2 RALSILGSTGSIGLSTLDVVRQHPDRFKIVGLAEGHDVNMLAEQIREFNPSIVSVRDAGSAELLKTLL 69
BLAST of FC930842 vs. ExPASy Swiss-Prot
Match: DXR_BACTN (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Bacteroides thetaiotaomicron GN=dxr PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.143e-12 Identity = 32/71 (45.07%), Postives = 49/71 (69.01%), Query Frame = 3 Query: 411 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANV 623 K I++LGSTGSIGTQ L ++ EH D + AL A + + LL Q ++F+P+VV + NE ++KEAL+++ Sbjct: 10 KQIAILGSTGSIGTQALQVIEEHPDLYEAYALTANNRVELLIAQARKFQPEVVVIANEEKYAQLKEALSDL 80 The following BLAST results are available for this feature:
BLAST of FC930842 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 80
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930842 ID=FC930842; Name=FC930842; organism=Citrus clementina; type=EST; length=674bpback to top |