FC930846
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930846 vs. ExPASy Swiss-Prot
Match: YCCK_BACSU (Uncharacterized oxidoreductase yccK OS=Bacillus subtilis GN=yccK PE=3 SV=2) HSP 1 Score: 70.0922 bits (170), Expect = 1.406e-11 Identity = 56/205 (27.32%), Postives = 103/205 (50.24%), Query Frame = 1 Query: 103 RVLSSTAGVRVSPLQLGAMSIGDAWSQFMGSMSKEQSFALLDAFVAAGGNFIDTANNYQNEQSEAWIGEWMAARNNRDQIVLPTKFTTDYRSHVVGKGNSPNACGNHKRSMILSVRDSLRKLQTDFIDVLYLHWWDHTTSIEEIMDSLHILVEQGKVMYLGISDSPAWVVAAANTYARAHGKTPFSIYPGRWNVMRRDFERDILP 717 R L T ++V + GA ++G +++ E L+ + G NFIDTA Y +SE IGE + R R+++++ TK +H G+ N + + V SL++L+TD+ID+ Y+H+ D T + E+ +L L ++GK+ +G S+ + N A G ++ +++++RD E+++LP Sbjct: 5 RTLGKTK-LKVKRIGFGANAVGG--HNLFPNLNDETGKDLVRTALDGGVNFIDTAFIYGLGRSEELIGEVVQERGVRNELIIATK-----GAHKEVDGSIE--LDNSREFLRSEVEKSLKRLKTDYIDLYYVHFPDGKTPLAEVAGTLKELKDEGKIKAIGASNLDYQQLQDFN----ADGY--LEVFQAEYSLIQRDAEKELLP 193
BLAST of FC930846 vs. ExPASy Swiss-Prot
Match: KCAB1_MUSPU (Voltage-gated potassium channel subunit beta-1 OS=Mustela putorius GN=KCNAB1 PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.406e-11 Identity = 57/211 (27.01%), Postives = 98/211 (46.45%), Query Frame = 1 Query: 100 YRVLSSTAGVRVSPLQLGAMSIGDAWSQFMGSMSKEQSFALLDAFVAAGGNFIDTANNYQNEQSEAWIGEWMAARN-NRDQIVLPTKFTTDYRSHVVGKGNSPNACGNHKRSMILSVRDSLRKLQTDFIDVLYLHWWDHTTSIEEIMDSLHILVEQGKVMYLGISDSPAWVVAAANTYARAHGKTPFSIYPGRWNVMRRDFERDILPMARH 729 YR L + G+RVS L LG W F G +S E + L+ +G N DTA Y ++E +G + + R +V+ TK + G + G ++ +I ++ SL++LQ +++DV++ + D T +EEI+ ++ ++ QG MY G S A + A + AR P +++ +R+ LP H Sbjct: 80 YRNLGKS-GLRVSCLGLGT------WVTFGGQISDEVAERLMTIAYESGVNLFDTAEVYAAGKAEVILGSIIKKKGWRRSSLVITTK--------LYWGGKAETERGLSRKHIIEGLKGSLQRLQLEYVDVVFANRPDSNTPMEEIVRAMTHVINQGMAMYWGTSRWSAMEIMEAYSVARQFNMIPPVCEQAEYHLFQREKVEVQLPELYH 275
BLAST of FC930846 vs. ExPASy Swiss-Prot
Match: KCAB1_RABIT (Voltage-gated potassium channel subunit beta-1 OS=Oryctolagus cuniculus GN=KCNAB1 PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.836e-11 Identity = 54/204 (26.47%), Postives = 95/204 (46.57%), Query Frame = 1 Query: 121 AGVRVSPLQLGAMSIGDAWSQFMGSMSKEQSFALLDAFVAAGGNFIDTANNYQNEQSEAWIGEWMAARN-NRDQIVLPTKFTTDYRSHVVGKGNSPNACGNHKRSMILSVRDSLRKLQTDFIDVLYLHWWDHTTSIEEIMDSLHILVEQGKVMYLGISDSPAWVVAAANTYARAHGKTPFSIYPGRWNVMRRDFERDILPMARH 729 +G+RVS L LG W F G +S E + L+ +G N DTA Y ++E +G + + R +V+ TK + G + G ++ +I ++ SL++LQ +++DV++ + D T +EEI+ ++ ++ QG MY G S A + A + AR P +++ +R+ LP H Sbjct: 97 SGLRVSCLGLGT------WVTFGGQISDEVAERLMTIAYESGVNLFDTAEVYAAGKAEVILGSIIKKKGWRRSSLVITTK--------LYWGGKAETERGLSRKHIIEGLKGSLQRLQLEYVDVVFANRPDSNTPMEEIVRAMTHVINQGMAMYWGTSRWSAMEIMEAYSVARQFNMIPPVCEQAEYHLFQREKVEVQLPELYH 286
BLAST of FC930846 vs. ExPASy Swiss-Prot
Match: KCAB1_HUMAN (Voltage-gated potassium channel subunit beta-1 OS=Homo sapiens GN=KCNAB1 PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.836e-11 Identity = 54/204 (26.47%), Postives = 95/204 (46.57%), Query Frame = 1 Query: 121 AGVRVSPLQLGAMSIGDAWSQFMGSMSKEQSFALLDAFVAAGGNFIDTANNYQNEQSEAWIGEWMAARN-NRDQIVLPTKFTTDYRSHVVGKGNSPNACGNHKRSMILSVRDSLRKLQTDFIDVLYLHWWDHTTSIEEIMDSLHILVEQGKVMYLGISDSPAWVVAAANTYARAHGKTPFSIYPGRWNVMRRDFERDILPMARH 729 +G+RVS L LG W F G +S E + L+ +G N DTA Y ++E +G + + R +V+ TK + G + G ++ +I ++ SL++LQ +++DV++ + D T +EEI+ ++ ++ QG MY G S A + A + AR P +++ +R+ LP H Sbjct: 97 SGLRVSCLGLGT------WVTFGGQISDEVAERLMTIAYESGVNLFDTAEVYAAGKAEVILGSIIKKKGWRRSSLVITTK--------LYWGGKAETERGLSRKHIIEGLKGSLQRLQLEYVDVVFANRPDSNTPMEEIVRAMTHVINQGMAMYWGTSRWSAMEIMEAYSVARQFNMIPPVCEQAEYHLFQREKVEVQLPELYH 286
BLAST of FC930846 vs. ExPASy Swiss-Prot
Match: IOLS_BACSU (Protein iolS OS=Bacillus subtilis GN=iolS PE=1 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 4.090e-11 Identity = 51/200 (25.50%), Postives = 97/200 (48.50%), Query Frame = 1 Query: 127 VRVSPLQLGAMSIGDAWSQFMGSMSKEQSFALLDAFVAAGGNFIDTANNYQNEQSEAWIGEWMAARNNRDQIVLPTKFTTDYRSHVVGKGNSPNACGNHKRSMILSVRDSLRKLQTDFIDVLYLHWWDHTTSIEEIMDSLHILVEQGKVMYLGISDSPAWVVAAANTYARAHGKTPFSIYPGRWNVMRRDFERDILPMAR 726 ++V P+ LG ++G ++++E L+ + G +DTA Y +SE IGE + NR+ +V+ TK + + NSP+ SV +SL++L TD+ID+ Y+H+ D T +E +++L+ + + GK+ +G+S+ + AN + G +N++ R+ E+ P + Sbjct: 11 LQVFPIGLGTNAVGG--HNLYPNLNEETGKELVREAIRNGVTMLDTAYIYGIGRSEELIGE-VLREFNREDVVIATKAAHRKQGNDFVFDNSPDFLKK-------SVDESLKRLNTDYIDLFYIHFPDEHTPKDEAVNALNEMKKAGKIRSIGVSNFSLEQLKEANKDGLV------DVLQGEYNLLNREAEKTFFPYTK 194
BLAST of FC930846 vs. ExPASy Swiss-Prot
Match: YAKC_SCHPO (Aldo-keto reductase yakc [NADP+] OS=Schizosaccharomyces pombe GN=yakc PE=1 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.977e-11 Identity = 52/172 (30.23%), Postives = 84/172 (48.84%), Query Frame = 1 Query: 190 GSMSKEQSFALLDAFVAAGGNFIDTANNYQNEQSEAWIGEWMAARNNRDQIVLPTKFTTDYRSHVVGKGNSPNACGNHKRSMILSVRDSLRKLQTDFIDVLYLHWWDHTTSIEEIMDSLHILVEQGKVMYLGISDSPAWVVAAANTYARAHGKTPFSIYPGRWNVMRRDFER 705 G S+E + A+L G F D+++ Y +E IG W R +I L TKF + ++ G+ + N ++++ LS L++L D ID+ Y+H + T IE+IM +L VE GK+ Y+G+S+ +ANT RA P S ++ + ER Sbjct: 28 GPSSEEANQAVLTHAADLGCTFWDSSDMYGFGANEECIGRWFKQTGRRKEIFLATKFGYE-KNPETGELSLNNEPDYIEKALDLS----LKRLGIDCIDLYYVHRFSGETPIEKIMGALKKCVEAGKIRYIGLSE------CSANTIRRAAAVYPVSAVQVEYSPFSLEIER 188 The following BLAST results are available for this feature:
BLAST of FC930846 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 36
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC930846 ID=FC930846; Name=FC930846; organism=Citrus clementina; type=EST; length=733bpback to top |