FC930851

Overview
NameFC930851
Unique NameFC930851
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length694
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930851 vs. ExPASy Swiss-Prot
Match: P2C65_ARATH (Probable protein phosphatase 2C 65 OS=Arabidopsis thaliana GN=At5g01700 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 9.811e-12
Identity = 75/257 (29.18%), Postives = 121/257 (47.08%), Query Frame = 2
Query:   23 RGKRATMEDFYDIKTSNVDGQAVCMF-GVFDGHG--GSRAAEYLKEHL------------------FENLLKHPQ--FMTDTKLAISETYQQTDVDF-LESERDTYRDDGSTASTAVLVGNHLYVANVGDSRTVI----SKAGKAIPLSEDHKPNRCDERKRIENAGGVV-----------MWAGTWRVGGVLAMSRAFGNRMLKQF-VVAEPEIQDLEVDEGFELLVLASDGLWDVVPNEDAVALARTGERPEIAA 673
            +GK+   +D   +   N  G+   +F GVFDGHG  G + + ++ E+L                   EN     Q     + +  +   ++Q D +  L+S  D++   G+TA T     + L +AN+G SR V+      + KA+ L+ D KP    E +RI +  G V           +W       G LAMSRAFG+  LK + +V  P++   +V    E +VLA+DG+WDV+ NE+ V +  + +   +AA
Sbjct:   54 QGKKGINQDAMTV-WENFGGEEDTIFCGVFDGHGPMGHKISRHVCENLPSRVHSKIRSSKSAGDENIENNSSQSQEELFREFEDILVTFFKQIDSELGLDSPYDSF-CSGTTAVTVFKQADCLVIANLGHSRAVLGTRSKNSFKAVQLTVDLKPCVQREAERIVSCKGRVFAMEEEPDVYRVWMPDDDCPG-LAMSRAFGDFCLKDYGLVCIPDVFCRKVSREDEFVVLATDGIWDVLSNEEVVKVVGSCKDRSVAA 307          
BLAST of FC930851 vs. ExPASy Swiss-Prot
Match: CYAA_NEUCR (Adenylate cyclase OS=Neurospora crassa GN=cr-1 PE=3 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 2.855e-11
Identity = 50/126 (39.68%), Postives = 70/126 (55.56%), Query Frame = 2
Query:  272 DDGSTASTAVLVGNHLYVANVGDSRTVISKA-GKAIPLSEDHKPNRCDERKRIENAGGVVMWAGTWRVGGVLAMSRAFGNRMLKQFVVAEPEIQDLEVDEGFELLVLASDGLWDVVPNEDAVALAR 646
            + G  A+ A L    LYVANVGD + ++ +A G    L++ H P    ER RI NAGG V   G  R+  VL +SRAFG   L   V A P+I +  +D+  E +++AS  LW+ +  E  V +AR
Sbjct: 1672 NSGCVATVAYLSELKLYVANVGDVQGMLIQANGSFKMLTKKHDPADPVERSRIRNAGGWVSRNG--RLNDVLNVSRAFGYTELLPAVQAAPDITEHTIDDKDETVLIASKELWEHLRPELIVDVAR 1795          
BLAST of FC930851 vs. ExPASy Swiss-Prot
Match: FEM2_CAEEL (Ca(2+)/calmodulin-dependent protein kinase phosphatase OS=Caenorhabditis elegans GN=fem-2 PE=1 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 4.869e-11
Identity = 56/193 (29.02%), Postives = 96/193 (49.74%), Query Frame = 2
Query:   89 VCMFGVFDGHGGSRAAEYLKEHLFENLLKHPQFMTDTKLAISETYQQTDVDFLESERDTYRD------DGSTASTAVLVGNH--LYVANVGDSRTVISKAGKAIPLSEDHKPNRCDERKRIENAGG-VVMWAGTWRVGGVLAMSRAFGNRMLKQFVVAEPEIQDLEVDEGFELLVLASDGLWDVVPNEDAVAL 640
            + +  VFDGHGG   ++Y   HL+E  L+  +   D   ++ +  +++ ++ L+ ER T R        GSTA    +  +   + +A +GDS   +    +   L+  H P+   E +R+E AGG + +  G  RV GVL ++RA G+   +  +  EPE   + ++    L++LA DG+ DV    D   L
Sbjct:  195 ISVLAVFDGHGGHECSQYAAGHLWETWLEVRK-SRDPSDSLEDQLRKS-LELLD-ERMTVRSVKECWKGGSTAVCCAIDMDQKLMALAWLGDSPGYVMSNIEFRQLTRGHSPSDEREARRVEEAGGQLFVIGGELRVNGVLNLTRALGDVPGRPMISNEPETCQVPIESSDYLVLLACDGISDVFNERDLYQL 384          
BLAST of FC930851 vs. ExPASy Swiss-Prot
Match: CYAA_SACKL (Adenylate cyclase OS=Saccharomyces kluyveri GN=CYR1 PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.359e-11
Identity = 44/136 (32.35%), Postives = 73/136 (53.68%), Query Frame = 2
Query:  278 GSTASTAVLVGNHLYVANVGDSRTVISKA-GKAIPLSEDHKPNRCDERKRIENAGGVVMWAGTWRVGGVLAMSRAFGNRMLKQFVVAEPEIQDLEVDEGFELLVLASDGLWDVVPNEDAVALARTGE-RPEIAARK 679
            GS+A+   L G  +Y AN+GD+  V+SK  G  + L++ H P   +E +RI  +GG V      ++ GV  +SRA G   L   + A P+I +  +    E+L++A+  LW+ +  E    ++R  + +P  AA K
Sbjct: 1286 GSSATVVYLKGKKIYTANIGDTMAVLSKNNGDFVTLTKLHVPAEREEYERIRTSGGYV---NNQKLDGVSEVSRAVGFFDLLPHIHASPDISETVLSYSDEMLIIATHKLWEYLDYETVCDISRENKSQPMSAAEK 1418          
The following BLAST results are available for this feature:
BLAST of FC930851 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 194
Match NameE-valueIdentityDescription
P2C65_ARATH9.811e-1229.18Probable protein phosphatase 2C 65 OS=Arabidopsis ... [more]
CYAA_NEUCR2.855e-1139.68Adenylate cyclase OS=Neurospora crassa GN=cr-1 PE=... [more]
FEM2_CAEEL4.869e-1129.02Ca(2+)/calmodulin-dependent protein kinase phospha... [more]
CYAA_SACKL6.359e-1132.35Adenylate cyclase OS=Saccharomyces kluyveri GN=CYR... [more]

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Properties
Property NameValue
Genbank descriptionC34109G02EF PostHarvP1 Citrus clementina cDNA clone C34109G02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930851 ID=FC930851; Name=FC930851; organism=Citrus clementina; type=EST; length=694bp
GAGATGTGGATACTCAAGTTTTAGGGGAAAGAGGGCAACTATGGAGGATT
TCTATGACATTAAAACTTCCAATGTTGATGGGCAAGCTGTCTGCATGTTT
GGAGTCTTTGATGGTCATGGTGGTTCCCGTGCGGCTGAGTATTTGAAGGA
GCACCTCTTTGAGAATCTCTTGAAGCATCCACAATTTATGACAGACACCA
AATTGGCTATAAGTGAAACATATCAACAGACTGATGTCGACTTTTTGGAA
TCTGAAAGAGATACTTACAGGGATGATGGTTCTACTGCTTCAACGGCTGT
ATTGGTTGGTAACCATCTATATGTTGCCAATGTCGGAGATTCTAGGACTG
TAATATCCAAGGCTGGTAAAGCAATTCCTCTTTCTGAGGATCATAAACCC
AACAGATGTGATGAGCGGAAGAGAATTGAAAATGCCGGAGGCGTTGTAAT
GTGGGCAGGCACTTGGAGAGTAGGAGGTGTGCTAGCTATGTCTCGTGCTT
TTGGTAACCGCATGCTGAAGCAATTTGTCGTTGCGGAACCTGAGATCCAG
GACCTTGAAGTAGATGAAGGATTTGAGCTGCTTGTGCTTGCAAGTGATGG
ACTATGGGATGTAGTACCCAATGAGGATGCTGTTGCACTTGCCCGAACAG
GGGAAAGACCTGAAATCGCAGCTCGGAAGTAACGGAGACTGCTT
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