FC930851

Overview
NameFC930851
Unique NameFC930851
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length694
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930851 vs. ExPASy Swiss-Prot
Match: P2C27_ARATH (Probable protein phosphatase 2C 27 OS=Arabidopsis thaliana GN=At2g33700 PE=2 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 8.833e-29
Identity = 80/231 (34.63%), Postives = 128/231 (55.41%), Query Frame = 2
Query:    2 RCGYSSFRGKRATMEDFY---DIKTSNVDGQAVC-----MFGVFDGHGGSRAAEYLKEHLFENLLKHPQFMTDTKLAISETYQQTDVDFLESERDTYRD--DGSTASTAVLVGNHLYVANVGDSRTVISKAGKAIPLSEDHKPNRCDERKRIENAGGVVMWAGTWRVGGVLAMSRAFGNRMLKQ------FVVAEPEIQDLEVDEGFELLVLASDGLWDVVPNEDAVALAR 646
            R G  + +G +  MED +   D   +++     C      +GVFDGHGG+ AA ++++++   +++   F    K AI   + + D +F +   D+  D   G+TA TA + G  L +AN GD R V+ + G+AI LS+DHKPN   E+ RIE  GGVV       + G L+++RA G+  +K        +  EPE+Q+ ++ E  E L++  DGLWDV+ ++ AV +AR
Sbjct:   84 RSGSCAEQGAKQFMEDEHICIDDLVNHLGAAIQCSSLGAFYGVFDGHGGTDAAHFVRKNILRFIVEDSSFPLCVKKAIKSAFLKADYEFAD---DSSLDISSGTTALTAFIFGRRLIIANAGDCRAVLGRRGRAIELSKDHKPNCTAEKVRIEKLGGVVY---DGYLNGQLSVARAIGDWHMKGPKGSACPLSPEPELQETDLSEDDEFLIMGCDGLWDVMSSQCAVTIAR 308          
BLAST of FC930851 vs. ExPASy Swiss-Prot
Match: P2C07_ARATH (Protein phosphatase 2C 7 OS=Arabidopsis thaliana GN=HAB2 PE=2 SV=2)

HSP 1 Score: 127.102 bits (318), Expect = 8.833e-29
Identity = 80/213 (37.56%), Postives = 117/213 (54.93%), Query Frame = 2
Query:   98 FGVFDGHGGSRAAEYLKEHLFENLLKHPQFMTDTKLAISETYQQTDVDFLESERDTYR--DD---------------------------GSTASTAVLVGNHLYVANVGDSRTVISKAGKAIPLSEDHKPNRCDERKRIENAGG-VVMWAGTWRVGGVLAMSRAFGNRMLKQFVVAEPEIQDLEVDEGFELLVLASDGLWDVVPNEDAVALAR 646
            FGV+DGHGG++ A+Y  + +   L +  + + + +L    T +   V + +   D Y   DD                           GSTA  A++  +H+ V+N GDSR V+ +   ++PLS DHKP+R DE  RIE AGG V+ W G  RV GVLAMSR+ G++ L+ FV+ +PE+  +      E L+LASDGLWDV+ N++A   AR
Sbjct:  238 FGVYDGHGGAQVADYCHDRIHSALAEEIERIKE-ELCRRNTGEGRQVQWEKVFVDCYLKVDDEVKGKINRPVVGSSDRMVLEAVSPETVGSTAVVALVCSSHIIVSNCGDSRAVLLRGKDSMPLSVDHKPDREDEYARIEKAGGKVIQWQGA-RVSGVLAMSRSIGDQYLEPFVIPDPEVTFMPRAREDECLILASDGLWDVMSNQEACDFAR 448          
BLAST of FC930851 vs. ExPASy Swiss-Prot
Match: PP2C3_SCHPO (Protein phosphatase 2C homolog 3 OS=Schizosaccharomyces pombe GN=ptc3 PE=2 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.154e-28
Identity = 84/227 (37.00%), Postives = 118/227 (51.98%), Query Frame = 2
Query:    8 GYSSFRGKRATMEDFYDIKTS---NVDGQAVCMFGVFDGHGGSRAAEYLKEHLFENLLKHPQFMT-DTKLAISETYQQTDVDFLESERDTYRDDGSTASTAVLVGNHLYVANVGDSRTVISKAGKAIPLSEDHKPNRCDERKRIENAGGVVMWAGTWRVGGVLAMSRAFGN--------RMLKQFVVAEPEIQDLEVDEGFELLVLASDGLWDVVPNEDAVALARTG 652
            G SS +G R +MED +    S   +     V  F V+DGHGG + A++   +L + L K+P F   D   A+  ++   D   L+ ++      G TA+  + VGN LY AN GDSRTV+   G A PLS DHKP+   E+ RI  AGG V +    RV G LA+SRA G+           KQ V A P++   E+ +  E +VLA DG+WD   ++  +   R G
Sbjct:   25 GLSSMQGWRISMEDAHSAILSMECSAVKDPVDFFAVYDGHGGDKVAKWCGSNLPQILEKNPDFQKGDFVNALKSSFLNADKAILDDDQFHTDPSGCTATVVLRVGNKLYCANAGDSRTVLGSKGIAKPLSADHKPSNEAEKARICAAGGFVDFG---RVNGNLALSRAIGDFEFKNSNLEPEKQIVTALPDVVVHEITDDDEFVVLACDGIWDCKTSQQVIEFVRRG 248          
BLAST of FC930851 vs. ExPASy Swiss-Prot
Match: P2C53_ORYSJ (Probable protein phosphatase 2C 53 OS=Oryza sativa subsp. japonica GN=Os05g0592800 PE=2 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.154e-28
Identity = 89/254 (35.04%), Postives = 126/254 (49.61%), Query Frame = 2
Query:    8 GYSSFRGKRATMED-------FYDIKTSNVDGQAVC-------------MFGVFDGHGGSRAAEYLKEHLFENLLKHPQFMTDT---------------KLAISETYQQTDVDF---LESERDTYRDD--GSTASTAVLVGNHLYVANVGDSRTVISKAGKAIPLSEDHKPNRCDERKRIENAGG-VVMWAGTWRVGGVLAMSRAFGNRMLKQFVVAEPEIQDLEVDEGFELLVLASDGLWDVVPNEDAVALAR 646
            G  S  G+R  MED       F+D+    V G A                F V+DGHGG + A Y ++ +   L +  +   D                + A  + + + D +      S       D  GSTA  AV+  +H+ VAN GDSR V+ +  + +PLS DHKPNR DE  RIE  GG V+ W G +RV GVLAMSR+ G++ LK +++  PE+  +   +  + L+LASDGLWDV+ NE+    AR
Sbjct:  126 GLESICGRRPEMEDDYAVVPRFFDLPLWMVAGDAAVDGLDRASFRLPAHFFAVYDGHGGVQVANYCRKRIHAVLTEELRRAEDDACGSDLSGLESKKLWEKAFVDCFSRVDAEVGGNAASGAPPVAPDTVGSTAVVAVVCSSHVIVANCGDSRAVLCRGKQPLPLSLDHKPNREDEYARIEALGGKVIQWNG-YRVLGVLAMSRSIGDKYLKPYIIPVPEVTVVARAKDDDCLILASDGLWDVMSNEEVCDAAR 378          
BLAST of FC930851 vs. ExPASy Swiss-Prot
Match: P2C27_ORYSJ (Probable protein phosphatase 2C 27 OS=Oryza sativa subsp. japonica GN=Os02g0799000 PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.507e-28
Identity = 80/233 (34.33%), Postives = 125/233 (53.65%), Query Frame = 2
Query:    2 RCGYSSFRGKRATMEDFY--------DIKTSNVDGQAVCMFGVFDGHGGSRAAEYLKEHLFENLLKHPQFMTDTKLAISETYQQTDVDFLES-ERDTYRDDGSTASTAVLVGNHLYVANVGDSRTVISKAGKAIPLSEDHKPNRCDERKRIENAGGVVMWAGTWRVGGVLAMSRAFGNRMLKQF---------VVAEPEIQDLEVDEGFELLVLASDGLWDVVPNEDAVALAR 646
            R G  S  G R  MED +        +   ++VD + +  +GVFDGHGG  AA Y++++L   +++   F  + +  +  ++ QTD  F E          G+TA TA++ G  L VAN GD R V+S+ G AI +S+DH+    +ERKRIE+ GG V       + G LA++RA G+  L+           + AEPE++ + + +  E L++ SDG+WD   N++AV   R
Sbjct:   54 RSGDWSDIGGRDYMEDAHVCISDLANNFGHNSVDDEIISFYGVFDGHGGKDAAHYVRDNLPRVIVEDADFPLELEKVVRRSFVQTDSQFAERCSHQNALSSGTTALTAMIFGRSLLVANAGDCRAVLSRRGTAIEMSKDHRTCCLNERKRIESLGGYV---DDGYLNGQLAVTRALGDWHLEGLKEVGEPGGPLSAEPELKMITLTKEDEFLIIGSDGIWDFFSNQNAVDFTR 283          
BLAST of FC930851 vs. ExPASy Swiss-Prot
Match: P2C43_ARATH (Probable protein phosphatase 2C 43 OS=Arabidopsis thaliana GN=At3g17250 PE=2 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 1.968e-28
Identity = 76/210 (36.19%), Postives = 122/210 (58.10%), Query Frame = 2
Query:   89 VCMFGVFDGHGGSRAAEYLKEH----LFENLLKHPQ-------FMTDTKLAISETYQQTDVDFLESERDTYRDDGSTASTAVLVGNHLYVANVGDSRTVISKAGKAIPLSEDHKPNRCDERKRIENAGGVVMWAGTWRVGGVLAMSRAFGNRMLKQF---------VVAEPEIQDLEVDEGFELLVLASDGLWDVVPNEDAVALARTGER 658
            +  +GVFDGHGGS A++Y+KE+     FE+ +           F+ + + +  E Y+  D+  +E ER      G+TA TA+++G HL VANVGD R V+ + GKA+ +S DHK     ER+R+E+ GG   + G +  G  LA++RA G+  +K+F         ++++P+IQ + + E  E L++  DG+WDV+ ++ AV   R G R
Sbjct:  156 MAFYGVFDGHGGSDASQYIKENAMSLFFEDAVFRQSPSVVDSLFLKELETSHREAYRLADLA-MEDERIVSSSCGTTALTALVIGRHLMVANVGDCRAVLCRKGKAVDMSFDHKSTFEPERRRVEDLGG--YFEGEYLYGD-LAVTRALGDWSIKRFSPLGESLSPLISDPDIQQMILTEEDEFLIMGCDGVWDVMTSQYAVTFVRQGLR 361          
BLAST of FC930851 vs. ExPASy Swiss-Prot
Match: P2C54_ORYSJ (Probable protein phosphatase 2C 54 OS=Oryza sativa subsp. japonica GN=Os06g0179700 PE=2 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 2.176e-27
Identity = 76/232 (32.76%), Postives = 123/232 (53.02%), Query Frame = 2
Query:    2 RCGYSSFRGKRATMEDFYDIKTS--------NVDGQAVCMFGVFDGHGGSRAAEYLKEHLFENLLKHPQFMTDTKLAISETYQQTDVDFLESERDTYRDDGSTASTAVLVGNHLYVANVGDSRTVISKAGKAIPLSEDHKPNRCDERKRIENAGGVVMWAGTWRVGGVLAMSRAFGNRMLKQF---------VVAEPEIQDLEVDEGFELLVLASDGLWDVVPNEDAVALAR 646
            R G  S  G R  MED +   T         +VD +A+  +GVFDGHGG  AA +++++L   +++   F  + +  +  ++   D  F +    T    G+TA TA++ G  L +AN GD R V+S+ G AI +S DH+P    E+ R+E+ GG V       + G+L ++RA G+  L+           + AEPE++ + + +  E L++ SDG+WDV  N++ V  AR
Sbjct:   65 RSGDWSDIGGRQYMEDTHVCITDLAKNFGYQSVDNEAISFYGVFDGHGGKDAAHFVRDNLPRIIVEDADFPLELEKVVRRSFVHADNQFAK----TTLSSGTTALTAMIFGRTLLIANAGDCRAVLSRCGTAIEMSVDHRPCSLSEKLRVESLGGYV---DDGYLNGLLGVTRALGDWHLEGMKEAGNPGGPLSAEPELKMITLTKDDEFLIIGSDGIWDVFSNQNVVDFAR 289          
BLAST of FC930851 vs. ExPASy Swiss-Prot
Match: P2C49_ARATH (Probable protein phosphatase 2C 49 OS=Arabidopsis thaliana GN=At3g62260 PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 4.847e-27
Identity = 81/241 (33.61%), Postives = 129/241 (53.53%), Query Frame = 2
Query:    2 RCGYSSFRGKRATMEDFYDIKTSNVDGQAVCMF---------GVFDGHGGSRAAEYLKEHLFENLLKHPQFMTDTKLA---ISETYQQTDVDFLESERDTYRDD------GSTASTAVLVGNHLYVANVGDSRTVISKAGKAIPLSEDHKPNRCDERKRIENAGGVVMWAGTWRVGGVLAMSRAFGNRMLK------QFVVAEPEIQDLEVDEGFELLVLASDGLWDVVPNEDAVALARTG 652
            R G  +  G +  MED + I+  ++  Q   +F          VFDGHGG  AA Y++E+      +  QF   ++++   + E        FL+++     D       G+TA TA++ G  L VAN GD R V+ + G+AI +SEDHKP    ER+R+E +GG +   G   +  VLA++RA G+  LK        +++EPEI+ + + E  E LV+  DG+WDV+ +++AV++ R G
Sbjct:   78 RSGSFADIGPKRNMEDEH-IRIDDLSSQVGSLFELPKPSAFYAVFDGHGGPEAAAYVRENAIRFFFEDEQFPQTSEVSSVYVEEVETSLRNAFLQADLALAEDCSISDSCGTTALTALICGRLLMVANAGDCRAVLCRKGRAIDMSEDHKPINLLERRRVEESGGFITNDG--YLNEVLAVTRALGDWDLKLPHGSQSPLISEPEIKQITLTEDDEFLVIGCDGIWDVLTSQEAVSIVRRG 315          
BLAST of FC930851 vs. ExPASy Swiss-Prot
Match: P2C47_ORYSJ (Probable protein phosphatase 2C 47 OS=Oryza sativa subsp. japonica GN=Os05g0134200 PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 4.847e-27
Identity = 85/255 (33.33%), Postives = 135/255 (52.94%), Query Frame = 2
Query:    2 RCGYSSFRGKRATMEDFY---DIKTSNVDGQAVC-----MFGVFDGHGGSRAAEYLKEHLFENLLKHPQFMTDTKLAISETYQQTDVD-----FLESER------DTYRDDGSTASTAVLVGNHLYVANVGDSRTVISKAGKAIPLSEDHKPNRCDERKRIENAGGVVMWAGTWRVGGVLAMSRAFGNRMLK------QFVVAEPEIQDLEVDEGFELLVLASDGLWDVVPNEDAVALARTGER----PEIAARK 679
            R G  +  G R  MED +   D  ++++    VC      +GVFDGHGG  AA Y+K H    L +  +F   ++  + ETY Q+  +     FL+++       D  R  G+TA TA++ G  L VAN GD R V+ + G A+ +S DH+ N  +E +R+  +GG +       + GVL+++RA G+  +K        ++AEPE +   + E  E L++  DG+WDV+ ++ AV++ R G R    PE  AR+
Sbjct:   76 RSGSFADIGPRRYMEDEHIRIDDLSAHLGSLLVCPLPSAFYGVFDGHGGLDAAAYMKRHAMRFLFEDSEFPQASQ--VDETYVQSVENSVRRAFLQADLALADDLDISRSSGTTALTALVFGRQLLVANAGDCRAVLCRRGVAMEMSRDHRANYAEECERVAASGGYI---EDGYLNGVLSVTRALGDWDMKMPDGSISPLIAEPEFRQTMLTEDDEFLIMGCDGIWDVMTSQHAVSIVRRGLRQHDDPERCARE 325          
BLAST of FC930851 vs. ExPASy Swiss-Prot
Match: PP2C2_PARTE (Probable protein phosphatase 2C 2 OS=Paramecium tetraurelia GN=GSPATT00030171001 PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 1.842e-26
Identity = 79/226 (34.96%), Postives = 124/226 (54.87%), Query Frame = 2
Query:   14 SSFRGKRATMEDFYDIKTSNVDGQAVCMFGVFDGHGGSRAAEYLKEHLFENLLKHPQFMTDT-KLAISETYQQTDVDFLESE--------RDTYRDD---GSTASTAVLVGNHLYVANVGDSRTVISKAGKAIPLSEDHKPNRCDERKRIENAGGVVMWAGTWRVGGVLAMSRAFGN---------RMLKQFVVAEPEIQDLEVDEGFELLVLASDGLWDVVPNED 628
            S  +G R TMED +  K   +  Q V +FGVFDGHGG   A+++++H  + LLK+  F     + A+ ET+ + D   +  E        + T  D+   G TA+ A++  N LYVAN GDSRTV+ +      +S DHKP+  +E+ RIE AGG V      RV G L +SRA G+         R+ +Q ++A P+++ +E+    + L+L  DG+++ + + D
Sbjct:   27 SEMQGWRNTMEDAHIHKPDVI--QDVSIFGVFDGHGGREVAQFVEKHFIDELLKNKNFKEQKFEEALKETFLKMDELLVTPEGQKELNQYKATDTDESYAGCTANVALIYKNTLYVANAGDSRTVLCRNNANYDMSVDHKPDNPEEKSRIERAGGFV---SDGRVNGNLNLSRALGDLEYKRDSKLRVNEQLIIAIPDVKKVELGPQDKFLLLGCDGVFETLNHMD 247          
The following BLAST results are available for this feature:
BLAST of FC930851 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 194
Match NameE-valueIdentityDescription
P2C27_ARATH8.833e-2934.63Probable protein phosphatase 2C 27 OS=Arabidopsis ... [more]
P2C07_ARATH8.833e-2937.56Protein phosphatase 2C 7 OS=Arabidopsis thaliana G... [more]
PP2C3_SCHPO1.154e-2837.00Protein phosphatase 2C homolog 3 OS=Schizosaccharo... [more]
P2C53_ORYSJ1.154e-2835.04Probable protein phosphatase 2C 53 OS=Oryza sativa... [more]
P2C27_ORYSJ1.507e-2834.33Probable protein phosphatase 2C 27 OS=Oryza sativa... [more]
P2C43_ARATH1.968e-2836.19Probable protein phosphatase 2C 43 OS=Arabidopsis ... [more]
P2C54_ORYSJ2.176e-2732.76Probable protein phosphatase 2C 54 OS=Oryza sativa... [more]
P2C49_ARATH4.847e-2733.61Probable protein phosphatase 2C 49 OS=Arabidopsis ... [more]
P2C47_ORYSJ4.847e-2733.33Probable protein phosphatase 2C 47 OS=Oryza sativa... [more]
PP2C2_PARTE1.842e-2634.96Probable protein phosphatase 2C 2 OS=Paramecium te... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC34109G02EF PostHarvP1 Citrus clementina cDNA clone C34109G02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930851 ID=FC930851; Name=FC930851; organism=Citrus clementina; type=EST; length=694bp
GAGATGTGGATACTCAAGTTTTAGGGGAAAGAGGGCAACTATGGAGGATT
TCTATGACATTAAAACTTCCAATGTTGATGGGCAAGCTGTCTGCATGTTT
GGAGTCTTTGATGGTCATGGTGGTTCCCGTGCGGCTGAGTATTTGAAGGA
GCACCTCTTTGAGAATCTCTTGAAGCATCCACAATTTATGACAGACACCA
AATTGGCTATAAGTGAAACATATCAACAGACTGATGTCGACTTTTTGGAA
TCTGAAAGAGATACTTACAGGGATGATGGTTCTACTGCTTCAACGGCTGT
ATTGGTTGGTAACCATCTATATGTTGCCAATGTCGGAGATTCTAGGACTG
TAATATCCAAGGCTGGTAAAGCAATTCCTCTTTCTGAGGATCATAAACCC
AACAGATGTGATGAGCGGAAGAGAATTGAAAATGCCGGAGGCGTTGTAAT
GTGGGCAGGCACTTGGAGAGTAGGAGGTGTGCTAGCTATGTCTCGTGCTT
TTGGTAACCGCATGCTGAAGCAATTTGTCGTTGCGGAACCTGAGATCCAG
GACCTTGAAGTAGATGAAGGATTTGAGCTGCTTGTGCTTGCAAGTGATGG
ACTATGGGATGTAGTACCCAATGAGGATGCTGTTGCACTTGCCCGAACAG
GGGAAAGACCTGAAATCGCAGCTCGGAAGTAACGGAGACTGCTT
back to top