FC930851

Overview
NameFC930851
Unique NameFC930851
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length694
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930851 vs. ExPASy Swiss-Prot
Match: PP2C2_YEAST (Protein phosphatase 2C homolog 2 OS=Saccharomyces cerevisiae GN=PTC2 PE=1 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.724e-24
Identity = 82/234 (35.04%), Postives = 119/234 (50.85%), Query Frame = 2
Query:    8 GYSSFRGKRATMEDFYDIKTSNV---DGQAVCMFGVFDGHGGSRAAEYLKEHLFENLLKHPQFMT-DTKLAISETYQQTDVDFLESERDTYRDDGSTASTAVLVG---NHLYVANVGDSRTVISKAGKAIPLSEDHKPNRCDERKRIENAGGVVMWAGTWRVGGVLAMSRAFGNRMLK---------QFVVAEPEIQDLEVD-EGFELLVLASDGLWDVVPNEDAVALARTGER 658
            G  + +G R +MED + ++ + +   D   +  +G+FDGHGG++ AEY    + E L +   F   +   A+ +T+  TDV  L+         G TA T++LV    N L   N GDSRTV++  G A  LS DHKP    E+ RI  A G V      RV G LA+SRA G+   K         Q V   P+I +  +D +  E ++LA DG+WD + ++D V L   G R
Sbjct:   25 GLCAMQGWRMSMEDSHILEPNVLTKSDKDHIAFYGIFDGHGGAKVAEYCGNKIVEILQEQKSFHEGNLPRALIDTFINTDVKLLQDPVMKEDHSGCTA-TSILVSKSQNLLVCGNAGDSRTVLATDGNAKALSYDHKPTLASEKSRIVAADGFVEMD---RVNGNLALSRAIGDFEFKSNPKLGPEEQIVTCVPDILEHSLDYDRDEFVILACDGIWDCLTSQDCVDLVHLGLR 254          
BLAST of FC930851 vs. ExPASy Swiss-Prot
Match: PP2C5_PARTE (Probable protein phosphatase 2C 5 OS=Paramecium tetraurelia GN=GSPATT00010582001 PE=3 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 2.251e-24
Identity = 74/217 (34.10%), Postives = 117/217 (53.92%), Query Frame = 2
Query:   23 RGKRATMEDFYDIKTSNVDGQAVCMFGVFDGHGGSRAAEYLKEHLFENLLKHPQF--------MTDTKLAISETYQ----QTDVDFLESERDTYRDDGSTASTAVLVGNHLYVANVGDSRTVISKAGKAIPLSEDHKPNRCDERKRIENAGGVVMWAGTWRVGGVLAMSRAFGNRMLK---------QFVVAEPEIQDLEVDEGFELLVLASDGLWD 610
            +G R TMED + I   N++   V +F VFDGHGGS  A + + H  E L+K+  +        +T+T   I +  Q    Q +++ +    D     G TA+ A++VG  LYVAN GDSR+ +++ GK   +S+DHKP+   E+KRIE AGG V      R  G L++SRA G+   K         Q + A P+++  ++    + L++  DG+++
Sbjct:   30 QGWRNTMEDAH-ISDMNIEPD-VHLFAVFDGHGGSEVAIFAERHFREELMKNKNYQQKNYEKALTETFFKIDKMLQEPSGQDELNKIRGVNDETSLAGCTANVALIVGKTLYVANAGDSRSFLNRDGKPFDMSKDHKPDDDQEKKRIERAGGFV---SDGRANGNLSLSRALGDLEYKKDSRFKPEEQIISALPDVKVTQLTASDKFLLMGCDGVFE 241          
BLAST of FC930851 vs. ExPASy Swiss-Prot
Match: P2C13_ARATH (Probable protein phosphatase 2C 13 OS=Arabidopsis thaliana GN=At1g48040 PE=2 SV=2)

HSP 1 Score: 112.079 bits (279), Expect = 2.940e-24
Identity = 74/212 (34.91%), Postives = 111/212 (52.36%), Query Frame = 2
Query:   98 FGVFDGHGGSRAAEYLKEHLFENLLKHPQFMTDTKLAISETYQQTDVDFLESERDTYRDD------------------GSTASTAVLVGNHLYVANVGDSRTVISKAGKAIPLSEDHKPNRCDERKRIENAGGVVMWAGTWRVGGVLAMSRAFGNRMLK-------QFVVAEPEIQDLEVDEGFELLVLASDGLWDVVPNEDAVALARTGER 658
            +GVFDGHGG  AA ++KE+L     +   F         E     D  FLE   +++R                    G+TA TA+++G HL VAN GD R V+ + G A+ +S DH+     ER+RIE+ GG   +     + GVLA++RA G+  LK         ++++PEI  + + E  E L+LA DG+WDV+ +++AV+  R G R
Sbjct:  117 YGVFDGHGGPEAAIFMKENLTRLFFQDAVF--------PEMPSIVDAFFLEELENSHRKAFALADLAMADETIVSGSCGTTALTALIIGRHLLVANAGDCRAVLCRRGVAVDMSFDHRSTYEPERRRIEDLGG---YFEDGYLNGVLAVTRAIGDWELKNPFTDSSSPLISDPEIGQIILTEDDEFLILACDGIWDVLSSQNAVSNVRQGLR 317          
BLAST of FC930851 vs. ExPASy Swiss-Prot
Match: PPMBL_MOUSE (Probable protein phosphatase 1B-like OS=Mus musculus PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 6.550e-24
Identity = 83/229 (36.24%), Postives = 117/229 (51.09%), Query Frame = 2
Query:    2 RCGYSSFRGKRATMEDFYDIKTSNVDG--QAVCMFGVFDGHGGSRAAEYLKEHLFENLLKH----PQFMTDTKLAISETYQQTDVDFLESERDTYRDDGSTASTAVLVG-NHLYVANVGDSRTVISKAGKAIPLSEDHKPNRCDERKRIENAGGVVMWAGTWRVGGVLAMSRAFGNRMLK---------QFVVAEPEIQDLEVDEGFELLVLASDGLWDVVPNEDAVAL 640
            R G S+ +G RA MED +  + + + G       F V DGHGG+RAA +   HL   +L      PQ     + A+   + Q D     S      D G + + A+LV    LY+A+ GDSR ++S++G     +EDH+P+R  ER+RI +AGG V      RV G LA+SRA G+   K         Q V AEPE+  L   +  E ++LASDG+WD +   D   L
Sbjct:   59 RFGASAVQGWRARMEDAHCARLA-LPGLPSGWAFFAVLDGHGGARAARFGARHLPGYVLGELGPAPQEPDGVRQALRSAFLQADAQL--SALWPRGDPGGSTAVALLVSPRFLYLAHCGDSRALLSRSGSVAFCTEDHRPHRPRERERIHDAGGTVR---RRRVEGSLAVSRALGDFAYKQAPGRPPELQLVSAEPEVAALARQDEDEFVLLASDGVWDALSGADLAGL 281          
BLAST of FC930851 vs. ExPASy Swiss-Prot
Match: ILKAP_BOVIN (Integrin-linked kinase-associated serine/threonine phosphatase 2C OS=Bos taurus GN=ILKAP PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 6.550e-24
Identity = 73/198 (36.87%), Postives = 117/198 (59.09%), Query Frame = 2
Query:   89 VCMFGVFDGHGGSRAAEYLKEHLFENLL-KHPQ-----FMTDTKLAISETYQQTDVDFLE---SERDTYRDDGSTASTAVLVGNHLYVANVGDSRTVI------SKAGKAIPLSEDHKPNRCDERKRIENAGGVVMWAGTWRVGGVLAMSRAFGNRMLKQF-VVAEPEIQDLEVDEGFELLVLASDGLWDVVPNEDAV 634
            V  F VFDGHGG RA+++  ++L +NL+ K P+          K  + +T++ TD +FL+   S++  ++D GSTA+  + V N LY+AN+GDSR ++      S+   A+ LS++H P + +ER RI+ AGG V      RV GVL +SR+ G+   K+  V + P+I+  ++      ++LA DGL+ V   E+AV
Sbjct:  123 VSYFAVFDGHGGIRASKFAAQNLHQNLIRKFPKGDGISVEKTVKRCLLDTFKHTDEEFLKQASSQKPAWKD-GSTATCVLAVDNTLYIANLGDSRAILCRYNEESQKHAALSLSKEHNPTQYEERMRIQKAGGNVR---DGRVLGVLEVSRSIGDGQYKRCGVTSVPDIRRCQLTPNDRFILLACDGLFKVFTPEEAV 316          
BLAST of FC930851 vs. ExPASy Swiss-Prot
Match: ILKAP_RAT (Integrin-linked kinase-associated serine/threonine phosphatase 2C OS=Rattus norvegicus GN=Ilkap PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 8.555e-24
Identity = 73/198 (36.87%), Postives = 117/198 (59.09%), Query Frame = 2
Query:   89 VCMFGVFDGHGGSRAAEYLKEHLFENLL-KHPQ-----FMTDTKLAISETYQQTDVDFLE---SERDTYRDDGSTASTAVLVGNHLYVANVGDSRTVI------SKAGKAIPLSEDHKPNRCDERKRIENAGGVVMWAGTWRVGGVLAMSRAFGNRMLKQF-VVAEPEIQDLEVDEGFELLVLASDGLWDVVPNEDAV 634
            V  F VFDGHGG RA+++  ++L +NL+ K P+          K  + +T++ TD +FL+   S++  ++D GSTA+  + V N LY+AN+GDSR ++      S+   A+ LS++H P + +ER RI+ AGG V      RV GVL +SR+ G+   K+  V + P+I+  ++      ++LA DGL+ V   E+AV
Sbjct:  145 VSYFAVFDGHGGIRASKFAAQNLHQNLIRKFPKGDVISVEKTVKRCLLDTFKHTDEEFLKQASSQKPAWKD-GSTATCVLAVDNILYIANLGDSRAILCRYNEESQKHAALSLSKEHNPTQYEERMRIQKAGGNVR---DGRVLGVLEVSRSIGDGQYKRCGVTSVPDIRRCQLTPNDRFILLACDGLFKVFTPEEAV 338          
BLAST of FC930851 vs. ExPASy Swiss-Prot
Match: ILKAP_MOUSE (Integrin-linked kinase-associated serine/threonine phosphatase 2C OS=Mus musculus GN=Ilkap PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 8.555e-24
Identity = 73/198 (36.87%), Postives = 117/198 (59.09%), Query Frame = 2
Query:   89 VCMFGVFDGHGGSRAAEYLKEHLFENLL-KHPQ-----FMTDTKLAISETYQQTDVDFLE---SERDTYRDDGSTASTAVLVGNHLYVANVGDSRTVI------SKAGKAIPLSEDHKPNRCDERKRIENAGGVVMWAGTWRVGGVLAMSRAFGNRMLKQF-VVAEPEIQDLEVDEGFELLVLASDGLWDVVPNEDAV 634
            V  F VFDGHGG RA+++  ++L +NL+ K P+          K  + +T++ TD +FL+   S++  ++D GSTA+  + V N LY+AN+GDSR ++      S+   A+ LS++H P + +ER RI+ AGG V      RV GVL +SR+ G+   K+  V + P+I+  ++      ++LA DGL+ V   E+AV
Sbjct:  145 VSYFAVFDGHGGIRASKFAAQNLHQNLIRKFPKGDIISVEKTVKRCLLDTFKHTDEEFLKQASSQKPAWKD-GSTATCVLAVDNILYIANLGDSRAILCRYNEESQKHAALSLSKEHNPTQYEERMRIQKAGGNVR---DGRVLGVLEVSRSIGDGQYKRCGVTSVPDIRRCQLTPNDRFILLACDGLFKVFTPEEAV 338          
BLAST of FC930851 vs. ExPASy Swiss-Prot
Match: ILKAP_HUMAN (Integrin-linked kinase-associated serine/threonine phosphatase 2C OS=Homo sapiens GN=ILKAP PE=1 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 8.555e-24
Identity = 73/198 (36.87%), Postives = 117/198 (59.09%), Query Frame = 2
Query:   89 VCMFGVFDGHGGSRAAEYLKEHLFENLL-KHPQ-----FMTDTKLAISETYQQTDVDFLE---SERDTYRDDGSTASTAVLVGNHLYVANVGDSRTVI------SKAGKAIPLSEDHKPNRCDERKRIENAGGVVMWAGTWRVGGVLAMSRAFGNRMLKQF-VVAEPEIQDLEVDEGFELLVLASDGLWDVVPNEDAV 634
            V  F VFDGHGG RA+++  ++L +NL+ K P+          K  + +T++ TD +FL+   S++  ++D GSTA+  + V N LY+AN+GDSR ++      S+   A+ LS++H P + +ER RI+ AGG V      RV GVL +SR+ G+   K+  V + P+I+  ++      ++LA DGL+ V   E+AV
Sbjct:  145 VSYFAVFDGHGGIRASKFAAQNLHQNLIRKFPKGDVISVEKTVKRCLLDTFKHTDEEFLKQASSQKPAWKD-GSTATCVLAVDNILYIANLGDSRAILCRYNEESQKHAALSLSKEHNPTQYEERMRIQKAGGNVR---DGRVLGVLEVSRSIGDGQYKRCGVTSVPDIRRCQLTPNDRFILLACDGLFKVFTPEEAV 338          
BLAST of FC930851 vs. ExPASy Swiss-Prot
Match: PP2C3_YEAST (Protein phosphatase 2C homolog 3 OS=Saccharomyces cerevisiae GN=PTC3 PE=1 SV=3)

HSP 1 Score: 110.153 bits (274), Expect = 1.117e-23
Identity = 79/234 (33.76%), Postives = 121/234 (51.71%), Query Frame = 2
Query:    8 GYSSFRGKRATMEDFYDIKTSNV---DGQAVCMFGVFDGHGGSRAAEYLKEHLFENLLKHPQFMTDT-KLAISETYQQTDVDFLESERDTYRDDGSTASTAVLVGNHL----YVANVGDSRTVISKAGKAIPLSEDHKPNRCDERKRIENAGGVVMWAGTWRVGGVLAMSRAFGNRMLK---------QFVVAEPEI--QDLEVDEGFELLVLASDGLWDVVPNEDAVALARTG 652
            G  + +G R +MED + ++ + +   D + +  +G+FDGHGGS  AE+    +   L K   F +   +  + +T+  TDV+ L+ E+   +DD S  +  V++ + L      AN GDSRTV+S  G +  +S DHKP    E+ RI  A G V      RV G LA+SRA G+   K         Q V   P+I   +L  DE  E ++LA DG+WD + +++ V L   G
Sbjct:   25 GLCAMQGWRMSMEDAHIVEPNLLAESDEEHLAFYGIFDGHGGSSVAEFCGSKMISILKKQESFKSGMLEQCLIDTFLATDVELLKDEK--LKDDHSGCTATVILVSQLKKLLICANSGDSRTVLSTGGNSKAMSFDHKPTLLSEKSRIVAADGFVEMD---RVNGNLALSRAIGDFEFKSNTKLGPHEQVVTCVPDIICHNLNYDED-EFVILACDGIWDCLTSQECVDLVHYG 252          
BLAST of FC930851 vs. ExPASy Swiss-Prot
Match: P2C57_ARATH (Protein phosphatase 2C 57 OS=Arabidopsis thaliana GN=PPH1 PE=2 SV=2)

HSP 1 Score: 108.997 bits (271), Expect = 2.489e-23
Identity = 81/260 (31.15%), Postives = 130/260 (50.00%), Query Frame = 2
Query:    2 RCGYSSFRGKRATMEDFYDIKTSNVDGQAVCMFGVFDGHGGSRAAEYLKEHLFE---------NLLKHPQFMTDTKLAISETYQQTD---VDFLESERDTYRDDGSTASTAVLVGNHLYVANVGDSRTVISKAGKAIPLSEDHKP-----NRCDERKRIENAGGVVMWAGTWRVGGVLAMSRAFG--------NRMLKQ--------------------FVVAEPEIQDLEVDEGFELLVLASDGLWDVVPNEDAVALAR 646
            R GY+S +G R  MED   I++  VD  +     VFDGH GS + ++L+E L++         +LL    F    K A+ + ++  D   + +LE+  D   + GSTA+  ++  +  ++A++GDS  V+S++G+   L++ H+P         E KR++ AGG   W    R+ G +A+SRAFG        N MLK+                     VVA P+I  + +    E ++LASDGLWD + + D V+  R
Sbjct:   59 RWGYTSVQGFRDEMEDDIVIRSDAVDSFSYA--AVFDGHAGSSSVKFLREELYKECVGALQAGSLLNGGDFAA-IKEALIKAFESVDRNLLKWLEANGDEEDESGSTATVMIIRNDVSFIAHIGDSCAVLSRSGQIEELTDYHRPYGSSRAAIQEVKRVKEAGG---WIVNGRICGDIAVSRAFGDIRFKTKKNDMLKKGVDEGRWSEKFVSRIEFKGDMVVATPDIFQVPLTSDVEFIILASDGLWDYMKSSDVVSYVR 312          
The following BLAST results are available for this feature:
BLAST of FC930851 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 194
Match NameE-valueIdentityDescription
PP2C2_YEAST1.724e-2435.04Protein phosphatase 2C homolog 2 OS=Saccharomyces ... [more]
PP2C5_PARTE2.251e-2434.10Probable protein phosphatase 2C 5 OS=Paramecium te... [more]
P2C13_ARATH2.940e-2434.91Probable protein phosphatase 2C 13 OS=Arabidopsis ... [more]
PPMBL_MOUSE6.550e-2436.24Probable protein phosphatase 1B-like OS=Mus muscul... [more]
ILKAP_BOVIN6.550e-2436.87Integrin-linked kinase-associated serine/threonine... [more]
ILKAP_RAT8.555e-2436.87Integrin-linked kinase-associated serine/threonine... [more]
ILKAP_MOUSE8.555e-2436.87Integrin-linked kinase-associated serine/threonine... [more]
ILKAP_HUMAN8.555e-2436.87Integrin-linked kinase-associated serine/threonine... [more]
PP2C3_YEAST1.117e-2333.76Protein phosphatase 2C homolog 3 OS=Saccharomyces ... [more]
P2C57_ARATH2.489e-2331.15Protein phosphatase 2C 57 OS=Arabidopsis thaliana ... [more]

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Properties
Property NameValue
Genbank descriptionC34109G02EF PostHarvP1 Citrus clementina cDNA clone C34109G02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930851 ID=FC930851; Name=FC930851; organism=Citrus clementina; type=EST; length=694bp
GAGATGTGGATACTCAAGTTTTAGGGGAAAGAGGGCAACTATGGAGGATT
TCTATGACATTAAAACTTCCAATGTTGATGGGCAAGCTGTCTGCATGTTT
GGAGTCTTTGATGGTCATGGTGGTTCCCGTGCGGCTGAGTATTTGAAGGA
GCACCTCTTTGAGAATCTCTTGAAGCATCCACAATTTATGACAGACACCA
AATTGGCTATAAGTGAAACATATCAACAGACTGATGTCGACTTTTTGGAA
TCTGAAAGAGATACTTACAGGGATGATGGTTCTACTGCTTCAACGGCTGT
ATTGGTTGGTAACCATCTATATGTTGCCAATGTCGGAGATTCTAGGACTG
TAATATCCAAGGCTGGTAAAGCAATTCCTCTTTCTGAGGATCATAAACCC
AACAGATGTGATGAGCGGAAGAGAATTGAAAATGCCGGAGGCGTTGTAAT
GTGGGCAGGCACTTGGAGAGTAGGAGGTGTGCTAGCTATGTCTCGTGCTT
TTGGTAACCGCATGCTGAAGCAATTTGTCGTTGCGGAACCTGAGATCCAG
GACCTTGAAGTAGATGAAGGATTTGAGCTGCTTGTGCTTGCAAGTGATGG
ACTATGGGATGTAGTACCCAATGAGGATGCTGTTGCACTTGCCCGAACAG
GGGAAAGACCTGAAATCGCAGCTCGGAAGTAACGGAGACTGCTT
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