FC930852
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930852 vs. ExPASy Swiss-Prot
Match: TCPW_HUMAN (T-complex protein 1 subunit zeta-2 OS=Homo sapiens GN=CCT6B PE=1 SV=4) HSP 1 Score: 182.57 bits (462), Expect = 1.787e-45 Identity = 94/160 (58.75%), Postives = 122/160 (76.25%), Query Frame = 1 Query: 169 SLRVLNPNAEVLNKSAALHMNINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDEPDKEILKMVARTTLRT 648 +++ +N AEV AAL +NI AA+GLQDVL+TNLGPKGT+KML GAGDIKLTKDGN LL EMQIQ+PTA +IA+ A AQDD++GDGTTS V+ IGEL+KQ++ I EG+HPR++ +GFE AK L+ LE+ K + E ++IL VART+L+T Sbjct: 3 AIKAVNSKAEVARAQAALAVNICAARGLQDVLRTNLGPKGTMKMLASGAGDIKLTKDGNVLLDEMQIQHPTASLIAKVATAQDDVTGDGTTSNVLIIGELLKQADLYISEGLHPRIIAEGFEAAKIKALEVLEEVK----VTKEMKRKILLDVARTSLQT 158
BLAST of FC930852 vs. ExPASy Swiss-Prot
Match: TCPW_MOUSE (T-complex protein 1 subunit zeta-2 OS=Mus musculus GN=Cct6b PE=2 SV=4) HSP 1 Score: 180.644 bits (457), Expect = 6.789e-45 Identity = 91/160 (56.88%), Postives = 121/160 (75.62%), Query Frame = 1 Query: 169 SLRVLNPNAEVLNKSAALHMNINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDEPDKEILKMVARTTLRT 648 ++++ NP AEV AAL +NI AA+GLQDVL+ LGPKG +KMLV GAGDIKLTKDGN LL EMQIQ+PTA +IA+ A AQD ++GDGTTS V+ IGEL+KQ++ I EG+HPR++ +GF++AK L+ L++ K + E +EIL VART+L+T Sbjct: 3 AIKIANPGAEVTRSQAALAVNICAARGLQDVLRPTLGPKGALKMLVSGAGDIKLTKDGNVLLHEMQIQHPTASIIAKVAAAQDHVTGDGTTSNVLIIGELLKQADLYISEGLHPRIITEGFDVAKTKALEVLDEIK----VQKEMKREILLDVARTSLQT 158
BLAST of FC930852 vs. ExPASy Swiss-Prot
Match: TCPZ_SCHPO (T-complex protein 1 subunit zeta OS=Schizosaccharomyces pombe GN=cct6 PE=2 SV=1) HSP 1 Score: 180.259 bits (456), Expect = 8.866e-45 Identity = 94/163 (57.67%), Postives = 118/163 (72.39%), Query Frame = 1 Query: 172 LRVLNPNAEVLNKSAALHMNINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDEPDKEILKMVARTTLRTSYTN 660 L +LNP AE + ++ AL +NI+AA GLQDVLK+NLGP GT KMLV GAG IKLTKDG LL EMQIQNPTA IA+ A AQDD +GDGTTS + +GEL+KQ+E I EG+HP ++ DGF +AK L FL+ FKT E D+E+L VA+T+L T ++ Sbjct: 2 LSLLNPKAESIQRAQALQVNISAAIGLQDVLKSNLGPTGTTKMLVDGAGAIKLTKDGKVLLTEMQIQNPTASCIAKAATAQDDATGDGTTSVCLLVGELLKQAELYIREGLHPSLISDGFNLAKNEALTFLDSFKTDF----EVDREVLLNVAKTSLSTKISS 160
BLAST of FC930852 vs. ExPASy Swiss-Prot
Match: TCPZ_PIG (T-complex protein 1 subunit zeta (Fragment) OS=Sus scrofa GN=CCT6 PE=3 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 4.411e-36 Identity = 73/102 (71.57%), Postives = 89/102 (87.25%), Query Frame = 1 Query: 214 AALHMNINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVL 519 AAL +NI+AA+GLQDVL+TNLGPKGT+KMLV GAGDIKLTKDGN LL EMQIQ+PTA +IA+ A AQDDI+GDG TS V+ IGEL+KQ++ I EG+HPR++ Sbjct: 3 AALAVNISAARGLQDVLRTNLGPKGTMKMLVSGAGDIKLTKDGNVLLHEMQIQHPTASLIAKVATAQDDITGDGXTSNVLIIGELLKQADLYISEGLHPRII 104
BLAST of FC930852 vs. ExPASy Swiss-Prot
Match: THSA_AERPE (Thermosome subunit alpha OS=Aeropyrum pernix GN=thsA PE=3 SV=2) HSP 1 Score: 122.479 bits (306), Expect = 2.194e-27 Identity = 60/146 (41.10%), Postives = 97/146 (66.44%), Query Frame = 1 Query: 217 ALHMNINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDEPDKEILKMVARTTLRTSY 654 AL NI AA+ L ++LK++LGP+G KMLV GDI +T DG T++KEM+IQ+P A ++ A AQD GDGTTS V+ G L++++E+ +DE +HP ++++G+ A L+ +++ PV + D+ +L+ +A TTL + + Sbjct: 23 ALRANILAARVLAEMLKSSLGPRGLDKMLVDAFGDITVTNDGATIVKEMEIQHPAAKLLVEVAKAQDAEVGDGTTSVVVLAGALLEKAEKLLDENLHPTIIIEGYTKAMEEALRLVDEAAVPVEVEDD---SVLRRIAETTLASKF 165
BLAST of FC930852 vs. ExPASy Swiss-Prot
Match: THSB_DESMO (Thermosome subunit beta (Fragment) OS=Desulfurococcus mobilis GN=thsB PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.422e-26 Identity = 59/142 (41.55%), Postives = 91/142 (64.08%), Query Frame = 1 Query: 217 ALHMNINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDEPDKEILKMVARTTL 642 AL NI AA+ + +++KT GPKG KMLV GD+ +T DG T+L + +IQ+P A M+ + A +QD GDGT VI GEL+K +E +D+ +HP V++ G+ +A L+ L++ P+ + +E E+L+ VART+L Sbjct: 8 ALRTNILAARAISEMIKTTYGPKGMDKMLVDALGDVTITNDGATILDKAEIQHPAAKMLVQVAKSQDSEVGDGTKRAVILAGELLKYAEELLDKNIHPTVIISGYRMAMEEALKILDQMAEPIDLNNE---ELLRKVARTSL 146
BLAST of FC930852 vs. ExPASy Swiss-Prot
Match: THS2_HALVO (Thermosome subunit 2 OS=Halobacterium volcanii GN=cct2 PE=2 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.422e-26 Identity = 61/165 (36.97%), Postives = 97/165 (58.79%), Query Frame = 1 Query: 148 KRRNRTMSLRVLNPNAEVLNKSAALHMNINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDEPDKEILKMVARTTL 642 +R + + ++ +A+ + A NI AA+ + + +++ LGPKG KMLV GD+ +T DG T+LKEM I NPTA MI A Q+D +GDGTT+ V GEL+K +E +++ +HP ++ GF +A + ++ V D D+E+LK VA T++ Sbjct: 3 QRMQQGQPMIIMGEDAQRVKDRDAQEYNIRAARAVAEAVRSTLGPKGMDKMLVDSMGDVTITNDGVTILKEMDIDNPTAEMIVEVAETQEDEAGDGTTTAVAIAGELLKNAEDLLEQDIHPTAIIRGFNLASEKAREEIDDIAERV---DPDDEELLKKVAETSM 164
BLAST of FC930852 vs. ExPASy Swiss-Prot
Match: THSB_AERPE (Thermosome subunit beta OS=Aeropyrum pernix GN=thsB PE=3 SV=2) HSP 1 Score: 118.627 bits (296), Expect = 3.168e-26 Identity = 59/144 (40.97%), Postives = 92/144 (63.89%), Query Frame = 1 Query: 217 ALHMNINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDEPDKEILKMVARTTLRT 648 AL NI A + + +LKT GPKG KMLV GDI +T +G T+L +M + +P A M+ + + Q+D +GDGT +TVIF GEL+K++E+ +D +HP ++V+G++ A R + +E PV D E LK++A+T+L + Sbjct: 31 ALRANIMAVRAIAQILKTTYGPKGMDKMLVDSLGDITITNNGATILDKMDVAHPAAKMLVQISKGQEDEAGDGTKTTVIFAGELLKEAEKLLDINIHPTIIVEGYKEALRKASEVIESIAEPV---SYDDVEKLKLIAKTSLNS 171
BLAST of FC930852 vs. ExPASy Swiss-Prot
Match: THSA_ARCFU (Thermosome subunit alpha OS=Archaeoglobus fulgidus GN=thsA PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 3.168e-26 Identity = 59/149 (39.60%), Postives = 91/149 (61.07%), Query Frame = 1 Query: 217 ALHMNINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDEPDKEILKMVARTTLRTSYTNH 663 A MNI AA+ + + +K+ LGPKG KMLV GD+ +T DG T+LKEM +++P A MI A QD+ GDGTT+ V+ GEL+K++E +D+ +HP V+ G+ +A ++ LE + D D+E LK +A T + ++ + Sbjct: 24 AQRMNIMAARVIAEAVKSTLGPKGMDKMLVDSLGDVVITNDGVTILKEMDVEHPAAKMIIEVAKTQDNEVGDGTTTAVVLAGELLKKAEELLDQDIHPTVIARGYRMAANKAVEILESIAMDI---DVEDEETLKKIAATAITGKHSEY 169
BLAST of FC930852 vs. ExPASy Swiss-Prot
Match: THSB_ARCFU (Thermosome subunit beta OS=Archaeoglobus fulgidus GN=thsB PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 7.058e-26 Identity = 57/142 (40.14%), Postives = 89/142 (62.68%), Query Frame = 1 Query: 217 ALHMNINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDEPDKEILKMVARTTL 642 A MNI AA+ + + +++ LGPKG KMLV GD+ +T DG T+LKE+ +++P A MI A QD+ GDGTT+ V+ GEL+K++E +D+ +HP ++ +G+ A L+ L + P+ + D EILK +A T + Sbjct: 24 AQRMNIMAARVIAEAVRSTLGPKGMDKMLVDSLGDVVITNDGVTILKEIDVEHPAAKMIIEVAKTQDNEVGDGTTTAVVLAGELLKRAEELLDQEIHPAIIANGYRYAAEKALEILNEIAIPI---SKDDDEILKKIATTAM 162 The following BLAST results are available for this feature:
BLAST of FC930852 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 160
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930852 ID=FC930852; Name=FC930852; organism=Citrus clementina; type=EST; length=697bpback to top |