FC930852
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930852 vs. ExPASy Swiss-Prot
Match: TCPB_SCHPO (Probable T-complex protein 1 subunit beta OS=Schizosaccharomyces pombe GN=cct2 PE=2 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 6.398e-19 Identity = 56/162 (34.57%), Postives = 89/162 (54.94%), Query Frame = 1 Query: 181 LNPNAEVLNKSAALHMNINA-------AKGLQDVLKTNLGPKGTIKMLVGGA-GDIKLTKDGNTLLKEMQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDEPDKEILKMVARTTL 642 LNP+ ++ N+S NA A + D++K+ LGPKG K+L + GDI +T DG T+LK + + N A ++ + QDD GDGTTS +F EL++Q+E ++ +HP+V++DG+ IA + + L + L+ +ARTTL Sbjct: 3 LNPH-QIFNESGIQERGENARLSSFVGAIAVGDLVKSTLGPKGMDKILQSNSSGDIVVTNDGATILKSIALDNAAAKVLVNISKVQDDEVGDGTTSVCVFAAELLRQAEIMVNAKIHPQVIIDGYRIATKTAIDALRASSIDNSSDPAKFRSDLENIARTTL 163
BLAST of FC930852 vs. ExPASy Swiss-Prot
Match: TCPA_CAEEL (T-complex protein 1 subunit alpha OS=Caenorhabditis elegans GN=cct-1 PE=2 SV=2) HSP 1 Score: 94.3597 bits (233), Expect = 6.398e-19 Identity = 39/114 (34.21%), Postives = 76/114 (66.67%), Query Frame = 1 Query: 229 NINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEK 570 N+ AA + +++K++LGP G KMLV GD+ +T DG T+LK++++++P ++ A QD+ GDGTTS VI EL+K+++ + + +HP +++G+ +A + ++++ + Sbjct: 25 NVTAAVAIANIVKSSLGPVGLDKMLVDDVGDVIVTNDGATILKQLEVEHPAGKVLVELAQLQDEEVGDGTTSVVIVAAELLKRADELVKQKVHPTTIINGYRLACKEAVKYISE 138
BLAST of FC930852 vs. ExPASy Swiss-Prot
Match: TCPA_YEAST (T-complex protein 1 subunit alpha OS=Saccharomyces cerevisiae GN=TCP1 PE=1 SV=2) HSP 1 Score: 93.9745 bits (232), Expect = 8.357e-19 Identity = 49/140 (35.00%), Postives = 80/140 (57.14%), Query Frame = 1 Query: 223 HMNINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDEPDKEILKMVARTTL 642 + N+ A + +V+K++LGP G KMLV GD +T DG T+L + +Q+P ++ A QD GDGTTS VI EL+K++ + +HP ++ GF +A R ++F+ + + V D KE L +A+T++ Sbjct: 27 NQNVLATMAVANVVKSSLGPVGLDKMLVDDIGDFTVTNDGATILSLLDVQHPAGKILVELAQQQDREIGDGTTSVVIIASELLKRANELVKNKIHPTTIITGFRVALREAIRFINEVLSTSV--DTLGKETLINIAKTSM 164
BLAST of FC930852 vs. ExPASy Swiss-Prot
Match: TCPD_DEBHA (T-complex protein 1 subunit delta OS=Debaryomyces hansenii GN=CCT4 PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.091e-18 Identity = 50/138 (36.23%), Postives = 82/138 (59.42%), Query Frame = 1 Query: 229 NINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDEPDKEILKMVARTTL 642 NI AA+ + D ++T+LGPKG KM+ G+I ++ DG T+LK M + +P A M+ + AQD +GDGTTS I G L+ +E+ +++G+HP ++ + F+ A + + L + + + DKE L A T+L Sbjct: 29 NILAARAVSDAIRTSLGPKGMDKMIKTKNGEIIISNDGATILKHMAVLHPAARMLVDVSAAQDVEAGDGTTSVAILTGSLLGAAEKLLNKGIHPTLISESFQRAATRSAEVLLEMSHKISL---DDKEALIRAASTSL 163
BLAST of FC930852 vs. ExPASy Swiss-Prot
Match: TCPA2_MOUSE (T-complex protein 1 subunit alpha B OS=Mus musculus GN=Tcp1 PE=1 SV=3) HSP 1 Score: 93.5893 bits (231), Expect = 1.091e-18 Identity = 45/143 (31.47%), Postives = 85/143 (59.44%), Query Frame = 1 Query: 214 AALHMNINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDEPDKEILKMVARTTL 642 A N+ AA + +++K++ GP G KMLV GD+ +T DG T+LK +++++P A ++ A QD GDGTTS VI EL+K ++ + + +HP ++ G+ +A + ++++ + ++ DE ++ L A+T++ Sbjct: 16 AVRSQNVMAAASIANIVKSSFGPVGLDKMLVDDIGDVTITNDGATILKLLEVEHPAAKVLCELADLQDKEVGDGTTSVVIIAAELLKNADELVKQKIHPTSVISGYRLACKEAVRYIN--ENLIINTDELGRDCLINAAKTSM 156
BLAST of FC930852 vs. ExPASy Swiss-Prot
Match: TCPA_DICDI (T-complex protein 1 subunit alpha OS=Dictyostelium discoideum GN=tcp1 PE=2 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.425e-18 Identity = 48/165 (29.09%), Postives = 94/165 (56.97%), Query Frame = 1 Query: 166 MSLRVLNPNAEVLNKSAALHMNINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDEPDKEILKMVARTTLRTSYTN 660 MS +VL + + ++ + N+ A + +++KT+ GP G KML+ G I +T DG T+L+++ I++P A ++ + + QD GDGTT+ VI EL+K++ + +HP V++ GF +A ++++ +T V + K+ + +A+T++ + N Sbjct: 1 MSNKVLMIDGDRISGNEVRAQNVLAVTAIANIVKTSFGPIGLDKMLIDNIGSIVVTNDGATILQKIDIEHPAAKILVQLSELQDQEVGDGTTTVVILAAELLKRANELVARKVHPTVIISGFRLACTEAIKYIN--ETLAVKVETLPKDFIVNIAKTSMSSKTIN 163
BLAST of FC930852 vs. ExPASy Swiss-Prot
Match: TCPA_ARATH (T-complex protein 1 subunit alpha OS=Arabidopsis thaliana GN=CCT1 PE=2 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.425e-18 Identity = 46/137 (33.58%), Postives = 81/137 (59.12%), Query Frame = 1 Query: 166 MSLRVLNPNAEVLNKSA--ALHMNINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEK 570 MS+ NP+ +S N+ A + + +++KT+LGP G KMLV GD+ +T DG T+L+ +++++P A ++ A QD GDGTTS VI EL+K++ + +HP ++ G+ +A R + +++E+ Sbjct: 1 MSISAQNPDISGDRQSGQDVRTQNVMACQAVSNIVKTSLGPVGLDKMLVDDIGDVTITNDGATILRMLEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMRESCKYIEE 137
BLAST of FC930852 vs. ExPASy Swiss-Prot
Match: TCPA_MACFA (T-complex protein 1 subunit alpha OS=Macaca fascicularis GN=TCP1 PE=2 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.431e-18 Identity = 46/138 (33.33%), Postives = 84/138 (60.87%), Query Frame = 1 Query: 229 NINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDEPDKEILKMVARTTL 642 N+ AA + +++K++LGP G KMLV GD+ +T DG T+LK +++++P A ++ A QD GDGTTS VI EL+K ++ + +HP ++ G+ +A + ++++ + +V DE ++ L A+T++ Sbjct: 21 NVMAAASIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKLLEVEHPAAKVLCELADLQDKEVGDGTTSVVIIAAELLKNADELGKQKIHPTSVISGYRLACKEAVRYIN--ENLIVNTDELGRDCLINAAKTSM 156
BLAST of FC930852 vs. ExPASy Swiss-Prot
Match: TCPE_YEAST (T-complex protein 1 subunit epsilon OS=Saccharomyces cerevisiae GN=CCT5 PE=1 SV=3) HSP 1 Score: 92.0485 bits (227), Expect = 3.176e-18 Identity = 47/139 (33.81%), Postives = 83/139 (59.71%), Query Frame = 1 Query: 229 NINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPV-VMGDEPDKEILKMVARTTL 642 +I AA+ + ++KT+LGP+G K+L+ G+I +T DG T+L +M++ N A ++ + + +QDD GDGTT V+ L+ Q+ I +G+HP + +GF+ A + + LE+ + DE ++ L A+T+L Sbjct: 50 HILAARSVASIIKTSLGPRGLDKILISPDGEITITNDGATILSQMELDNEIAKLLVQLSKSQDDEIGDGTTGVVVLASALLDQALELIQKGIHPIKIANGFDEAAKLAISKLEETCDDISASNDELFRDFLLRAAKTSL 188
BLAST of FC930852 vs. ExPASy Swiss-Prot
Match: TCPA_SCHMA (T-complex protein 1 subunit alpha OS=Schistosoma mansoni GN=TCP-1A PE=2 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 3.176e-18 Identity = 50/144 (34.72%), Postives = 83/144 (57.64%), Query Frame = 1 Query: 229 NINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDEPDKEILKMVARTTLRTSYTN 660 N+ AA + +KT+LGP G KMLV GD+ +T DG T+LK + +++P A ++ + A QD+ GDGTTS VI L+K ++ I +HP +++G+ +A R +++++ V ++ K L VART + + N Sbjct: 18 NVLAACSFANFVKTSLGPVGLDKMLVDDVGDVTITNDGATILKLLDVEHPAAKILVQLAQLQDEEVGDGTTSVVILAAALLKNADELISRFVHPTTVINGYRLACREACKYIQEHMAYDV--NKLGKAGLINVARTAMSSKLIN 159 The following BLAST results are available for this feature:
BLAST of FC930852 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 160
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930852 ID=FC930852; Name=FC930852; organism=Citrus clementina; type=EST; length=697bpback to top |