FC930852
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930852 vs. ExPASy Swiss-Prot
Match: TCPG_DROME (T-complex protein 1 subunit gamma OS=Drosophila melanogaster GN=Cctgamma PE=2 SV=2) HSP 1 Score: 91.2781 bits (225), Expect = 5.417e-18 Identity = 47/146 (32.19%), Postives = 80/146 (54.79%), Query Frame = 1 Query: 229 NINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDEPDKEILKMVARTTLRTSYTNHW 666 NI A K + DV++T LGP+ +KML+ G I +T DGN +L+E+ +Q+P A + A QD+ GDGTTS ++ GE++ +E + + +HP V++ + A + L+ + + D DK + V + + T + W Sbjct: 27 NIQAGKAIADVIRTCLGPQAMLKMLMDPMGGIVMTNDGNAILREITVQHPAAKSMIEIARTQDEEVGDGTTSVIVLAGEMLAAAEPFLQQQIHPTVIIRAYREALEDIVGHLQSQLS--IQLDVKDKAKMADVVKACVGTKFIGKW 170
BLAST of FC930852 vs. ExPASy Swiss-Prot
Match: TCPA_ENCCU (T-complex protein 1 subunit alpha OS=Encephalitozoon cuniculi GN=TCP1 PE=1 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 7.074e-18 Identity = 47/138 (34.06%), Postives = 78/138 (56.52%), Query Frame = 1 Query: 157 NRTMSLRVLNPNAEVLNKSAALHMNINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEK 570 N+ +S + E + +A+ N A + + +KT+ GP G KM V AG++ +T DG T+L+ M I +P A ++ A QD GDGTTS V+ L+++ + I G+HP V+V G+++A +QF++K Sbjct: 2 NKEISTADILSGGESYSGISAVEKNAKAMMKVYNAIKTSFGPLGLDKMCVDSAGEVSITNDGATILQNMLIDDPAAKILVDLATQQDHEVGDGTTSVVLIAVSLIEKGAKLIASGVHPSVVVSGYKMAFNECVQFIKK 139
BLAST of FC930852 vs. ExPASy Swiss-Prot
Match: TCPH_PLAF7 (T-complex protein 1 subunit eta OS=Plasmodium falciparum (isolate 3D7) GN=PFC0350c PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 9.239e-18 Identity = 52/169 (30.77%), Postives = 93/169 (55.03%), Query Frame = 1 Query: 163 TMSLRVLNPNAEVLNKSAALHMNINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDEPDK-EILKMVARTTLRTS-YTNH 663 ++ + +L + + + NINA + + D++KT LGP+G K L+ D+ +T DG T++ + I +P A ++ A +QDD GDGTTS V+ GEL+ +++ +++G+ P +++DGF A + L + +E +K IL A+T L + +NH Sbjct: 6 SLPIVLLKEGTDTAQGRSQIIRNINACQIIVDIVKTTLGPRGMDK-LIYTERDVTITNDGATVMNLLNISHPAASILVDIAKSQDDEVGDGTTSVVVVAGELLNEAKGLLNDGIEPNMIIDGFRNACNVAINKLNELSLNFSNKNEEEKRSILLKCAQTALNSKLVSNH 173
BLAST of FC930852 vs. ExPASy Swiss-Prot
Match: TCPB_DICDI (T-complex protein 1 subunit beta OS=Dictyostelium discoideum GN=cct2 PE=1 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 9.239e-18 Identity = 51/157 (32.48%), Postives = 83/157 (52.87%), Query Frame = 1 Query: 178 VLNPNAEVLNKSAALHMNINAAKGLQDVLKTNLGPKGTIKMLVGGAG--DIKLTKDGNTLLKEMQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDEPDKEILKMVARTTL 642 +LN NA A + A + D++KT LGPKG K+L+ + ++ +T DG T+L ++ I NP A ++ + QDD GDGTTS + GEL+++ ER + + +HP+ ++ G+ +A L+ +E L +ARTTL Sbjct: 10 ILNQNASEERGEIARLSSFVGAIAITDLVKTTLGPKGMDKILISASNPNELIITNDGATILTKIYIDNPAAKILVDISRTQDDEVGDGTTSVCVLAGELLREGERLVQQKVHPQTIISGWRLALETARAALQSSTQDHSSDKVKFREDLLNIARTTL 166
BLAST of FC930852 vs. ExPASy Swiss-Prot
Match: TCPA_SCHPO (T-complex protein 1 subunit alpha OS=Schizosaccharomyces pombe GN=cct1 PE=2 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.207e-17 Identity = 48/151 (31.79%), Postives = 84/151 (55.63%), Query Frame = 1 Query: 190 NAEVLNKSAALHMNINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDEPDKEILKMVARTTL 642 + E ++ + N+ A + +V+K++LGP G KMLV GD+ +T DG T+L + +++P ++ A QD GDGTTS VI EL++++ + +HP ++ G+ +A R ++F+ + V D KE L VA+T++ Sbjct: 13 SGEKISGEDVRNQNVLATTAIANVVKSSLGPVGLDKMLVDDIGDVTVTNDGATILSLLDVEHPAGKVLVELAQQQDKEVGDGTTSVVIIAAELLRRANELVKNKIHPTTIITGYRLAIREAVKFMTDVLSCSV--DSLGKESLINVAKTSM 161
BLAST of FC930852 vs. ExPASy Swiss-Prot
Match: TCPH_SCHPO (Probable T-complex protein 1 subunit eta OS=Schizosaccharomyces pombe GN=cct7 PE=1 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.058e-17 Identity = 44/141 (31.21%), Postives = 83/141 (58.87%), Query Frame = 1 Query: 229 NINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDEPD-KEILKMVARTTLRT 648 NINA +QD ++T LGP G K++V G++ ++ DG T++K + I +P A + A AQD GDGTTS V+F GEL++++ +++G+ +++ G+ A + + +++ + + DE +++L A T + + Sbjct: 29 NINACVAVQDTIRTTLGPLGADKLMVDDRGEVVISNDGATIMKLLDIVHPAAKTLVDIARAQDAEVGDGTTSVVVFAGELLREARTFVEDGVSSHLIIRGYRKAAQLAVNKIKEIAIHLDLSDEGKLRDLLTKCASTAMNS 169
BLAST of FC930852 vs. ExPASy Swiss-Prot
Match: TCPH_PONAB (T-complex protein 1 subunit eta OS=Pongo abelii GN=CCT7 PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 4.585e-17 Identity = 43/139 (30.94%), Postives = 81/139 (58.27%), Query Frame = 1 Query: 229 NINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDEPD-KEILKMVARTTL 642 NI+A + + + ++T LGP+G K++V G G ++ DG T+LK + + +P A + A +QD GDGTTS + E +KQ + ++EG+HP++++ F A + + +++ V D+ + +++L+ A T L Sbjct: 25 NISACQVIAEAVRTTLGPRGMDKLIVDGRGKATISNDGATILKLLDVVHPAAKTLVDIAKSQDAEVGDGTTSVTLLAAEFLKQVKPYVEEGLHPQIIIRAFRTATQLAVNKIKEIAVTVKKADKVEQRKLLEKCAMTAL 163
BLAST of FC930852 vs. ExPASy Swiss-Prot
Match: TCPH_HUMAN (T-complex protein 1 subunit eta OS=Homo sapiens GN=CCT7 PE=1 SV=2) HSP 1 Score: 88.1965 bits (217), Expect = 4.585e-17 Identity = 43/139 (30.94%), Postives = 81/139 (58.27%), Query Frame = 1 Query: 229 NINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDEPD-KEILKMVARTTL 642 NI+A + + + ++T LGP+G K++V G G ++ DG T+LK + + +P A + A +QD GDGTTS + E +KQ + ++EG+HP++++ F A + + +++ V D+ + +++L+ A T L Sbjct: 25 NISACQVIAEAVRTTLGPRGMDKLIVDGRGKATISNDGATILKLLDVVHPAAKTLVDIAKSQDAEVGDGTTSVTLLAAEFLKQVKPYVEEGLHPQIIIRAFRTATQLAVNKIKEIAVTVKKADKVEQRKLLEKCAMTAL 163
BLAST of FC930852 vs. ExPASy Swiss-Prot
Match: TCPH_MOUSE (T-complex protein 1 subunit eta OS=Mus musculus GN=Cct7 PE=1 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 7.822e-17 Identity = 43/149 (28.86%), Postives = 85/149 (57.05%), Query Frame = 1 Query: 229 NINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDEPD-KEILKMVARTTLRTSYTNHWQI 672 NI+A + + + ++T LGP+G K++V G G ++ DG T+LK + + +P A + A +QD GDGTTS + E +KQ + ++EG+HP++++ F A + + +++ V D+ + +++L+ A T L + + ++ Sbjct: 25 NISACQVIAEAVRTTLGPRGMDKLIVDGRGKATISNDGATILKLLDVVHPAAKTLVDIAKSQDAEVGDGTTSVTLLAAEFLKQVKPYVEEGLHPQIIIRAFRTATQLAVNKIKEIAVTVKKQDKVEQRKMLEKCAMTALSSKLISQQKV 173
BLAST of FC930852 vs. ExPASy Swiss-Prot
Match: TCPH_BOVIN (T-complex protein 1 subunit eta OS=Bos taurus GN=CCT7 PE=2 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 7.822e-17 Identity = 43/139 (30.94%), Postives = 81/139 (58.27%), Query Frame = 1 Query: 229 NINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDEPD-KEILKMVARTTL 642 NI+A + + + ++T LGP+G K++V G G ++ DG T+LK + + +P A + A +QD GDGTTS + E +KQ + ++EG+HP++++ F A + + +++ V D+ + +++L+ A T L Sbjct: 25 NISACQVIAEAVRTTLGPRGMDKLIVDGRGKATISNDGATILKLLDVVHPAAKTLVDIAKSQDAEVGDGTTSVTLLAAEFLKQVKPYVEEGLHPQIIIRAFRTATQLAVNKIKEIAVTVKKEDKVEQRKLLEKCAMTAL 163 The following BLAST results are available for this feature:
BLAST of FC930852 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 160
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930852 ID=FC930852; Name=FC930852; organism=Citrus clementina; type=EST; length=697bpback to top |