FC930852
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930852 vs. ExPASy Swiss-Prot
Match: THSB_HALSA (Thermosome subunit beta OS=Halobacterium salinarium GN=thsB PE=3 SV=2) HSP 1 Score: 117.087 bits (292), Expect = 9.218e-26 Identity = 60/165 (36.36%), Postives = 98/165 (59.39%), Query Frame = 1 Query: 148 KRRNRTMSLRVLNPNAEVLNKSAALHMNINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDEPDKEILKMVARTTL 642 ++R + + ++ +A+ + A NI+AA+ + D +++ LGPKG KMLV GD+ +T DG T+L+EM I NPTA MI A Q+D +GDGTT+ V GEL+K +E ++ +HP ++ G+ +A Q E+ V D DK++++ VA T++ Sbjct: 4 QQRMQGQPMIIMGDDAQRVKDRDAQEHNISAARAVADAVRSTLGPKGMDKMLVSSMGDVTVTNDGVTILQEMDIDNPTAEMIVEVAETQEDEAGDGTTTAVAIAGELLKNAEDLLERDIHPTAIIKGYNLAAE---QAREEVDNVAVDVDPDDKDLIRSVAETSM 165
BLAST of FC930852 vs. ExPASy Swiss-Prot
Match: THSA_THEAC (Thermosome subunit alpha OS=Thermoplasma acidophilum GN=thsA PE=1 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 2.054e-25 Identity = 58/138 (42.03%), Postives = 86/138 (62.32%), Query Frame = 1 Query: 229 NINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDEPDKEILKMVARTTL 642 NI AAK + D ++T LGPKG KMLV GDI ++ DG T+LKEM +++PTA MI + AQD GDGTT+ V+ GEL+KQ+E +D+G+HP V+ +G+ +A + +++ + D L+ +A T L Sbjct: 27 NIEAAKAIADAVRTTLGPKGMDKMLVDSIGDIIISNDGATILKEMDVEHPTAKMIVEVSKAQDTAVGDGTTTAVVLSGELLKQAETLLDQGVHPTVISNGYRLAVNEARKIIDE-----IAEKSTDDATLRKIALTAL 159
BLAST of FC930852 vs. ExPASy Swiss-Prot
Match: THSB_THEK8 (Thermosome subunit beta OS=Thermococcus sp. (strain KS-8) GN=thsB PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 2.682e-25 Identity = 58/142 (40.85%), Postives = 87/142 (61.27%), Query Frame = 1 Query: 217 ALHMNINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDEPDKEILKMVARTTL 642 A +NI AA+ + + ++T LGPKG KMLV GDI +T DG T+L EM IQ+P A M+ A QD +GDGTT+ V+ GEL++++E +D+ +HP +++ G+ +A + L+ V D D+EILK A T + Sbjct: 24 AQRLNILAARIIAETVRTTLGPKGMDKMLVDSLGDIVITNDGATILDEMDIQHPAAKMMVEVAKTQDKEAGDGTTTAVVIAGELLRKAEELLDQNIHPSIIIKGYALAAEKAQEILDSIARDV---DVEDREILKKAAMTAI 162
BLAST of FC930852 vs. ExPASy Swiss-Prot
Match: THSB_THEK1 (Thermosome subunit beta OS=Thermococcus sp. (strain KS-1) GN=thsB PE=3 SV=2) HSP 1 Score: 115.546 bits (288), Expect = 2.682e-25 Identity = 58/142 (40.85%), Postives = 89/142 (62.68%), Query Frame = 1 Query: 217 ALHMNINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDEPDKEILKMVARTTL 642 A +NI AA+ + + ++T LGPKG KMLV GDI +T DG T+L EM IQ+P A M+ A QD +GDGTT+ V+ GEL++++E +D+ +HP +++ G+ +A + L++ V D D+EILK A T++ Sbjct: 24 AQRLNILAARIIAETVRTTLGPKGMDKMLVDSLGDIVITNDGATILDEMDIQHPAAKMMVEVAKTQDKEAGDGTTTAVVIAGELLRKAEELLDQNIHPSIIIKGYALAAEKAQEILDEIAKDV---DVEDREILKKAAVTSI 162
BLAST of FC930852 vs. ExPASy Swiss-Prot
Match: THSB_PYRKO (Thermosome subunit beta OS=Pyrococcus kodakaraensis GN=thsB PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 2.682e-25 Identity = 58/142 (40.85%), Postives = 89/142 (62.68%), Query Frame = 1 Query: 217 ALHMNINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDEPDKEILKMVARTTL 642 A +NI AA+ + + ++T LGPKG KMLV GDI +T DG T+L EM IQ+P A M+ A QD +GDGTT+ V+ GEL++++E +D+ +HP +++ G+ +A + L++ V D D+EILK A T++ Sbjct: 24 AQRLNILAARIIAETVRTTLGPKGMDKMLVDSLGDIVITNDGATILDEMDIQHPAAKMMVEVAKTQDKEAGDGTTTAVVIAGELLRKAEELLDQNIHPSIIIKGYALAAEKAQEILDEIAKDV---DVEDREILKKAAVTSI 162
BLAST of FC930852 vs. ExPASy Swiss-Prot
Match: THSA_SULSO (Thermosome subunit alpha OS=Sulfolobus solfataricus GN=thsA PE=3 SV=2) HSP 1 Score: 114.775 bits (286), Expect = 4.575e-25 Identity = 58/143 (40.56%), Postives = 93/143 (65.03%), Query Frame = 1 Query: 217 ALHMNINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDEPDKEILKMVARTTLR 645 AL NI AAK L ++L+++LGPKG KML+ GD+ +T DG T++K+M+IQ+P A ++ A AQD GDGTTS V+ G L++++E +D+ +HP ++++G++ A L+ L + T + + K++ VAR TLR Sbjct: 20 ALRNNILAAKTLAEMLRSSLGPKGLDKMLIDSFGDVTITNDGATIVKDMEIQHPAAKLLVEAAKAQDAEVGDGTTSAVVLAGALLEKAESLLDQNIHPTIIIEGYKKAYNKALELLPQLGTRIDI-----KDLNSSVARDTLR 157
BLAST of FC930852 vs. ExPASy Swiss-Prot
Match: THSA_SULSH (Thermosome subunit alpha OS=Sulfolobus shibatae GN=thsA PE=1 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 5.975e-25 Identity = 57/149 (38.26%), Postives = 96/149 (64.43%), Query Frame = 1 Query: 217 ALHMNINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGD---EPDKEILKMVARTTLRTSY 654 AL NI AAK L ++L+++LGPKG KML+ GD+ +T DG T++K+M+IQ+P A ++ A AQD GDGTTS V+ G L++++E +D+ +HP ++++G++ A L+ L + T + + D ++ L+ +A TTL + + Sbjct: 20 ALRNNILAAKTLAEMLRSSLGPKGLDKMLIDSFGDVTITNDGATIVKDMEIQHPAAKLLVEAAKAQDAEVGDGTTSAVVLAGALLEKAESLLDQNIHPTIIIEGYKKAYTKALELLPQLGTRIDIRDLNSSVARDTLRKIAFTTLASKF 168
BLAST of FC930852 vs. ExPASy Swiss-Prot
Match: THSB_SULAC (Thermosome subunit beta OS=Sulfolobus acidocaldarius GN=thsB PE=3 SV=2) HSP 1 Score: 114.005 bits (284), Expect = 7.803e-25 Identity = 58/142 (40.85%), Postives = 92/142 (64.79%), Query Frame = 1 Query: 217 ALHMNINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDEPDKEILKMVARTTL 642 AL +NI A K +++ LKT GP+G KMLV GDI +T DG T+L +M +Q+P A ++ + A QD+ + DGT + VIF GEL+K++E + + +HP ++V G++ A+ ++ +E+ T V + D EIL+ VA T+L Sbjct: 31 ALRINIAAVKAVEEALKTTYGPRGMDKMLVDSLGDITITNDGATILDKMDLQHPAAKLLVQIAKGQDEETADGTKTAVIFSGELVKKAEELLYKEIHPTIIVSGYKKAEEMAIKTIEEISTKVSVN---DTEILRKVALTSL 169
BLAST of FC930852 vs. ExPASy Swiss-Prot
Match: THS_PYRHO (Thermosome subunit OS=Pyrococcus horikoshii GN=ths PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.019e-24 Identity = 58/142 (40.85%), Postives = 86/142 (60.56%), Query Frame = 1 Query: 217 ALHMNINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDEPDKEILKMVARTTL 642 A MNI AA+ + + ++T LGPKG KMLV GDI +T DG T+L EM IQ+P A M+ A QD +GDGTT+ V+ GEL+K++E +D+ +HP +++ G+ +A + + L+ V DE E+L A T + Sbjct: 24 AQRMNILAARIIAETVRTTLGPKGMDKMLVDSLGDIVITNDGATILDEMDIQHPAAKMMVEVAKTQDKEAGDGTTTAVVIAGELLKKAEELLDQNIHPSIIIKGYTLASQKAQEILDSIAKEVKPDDE---EVLLKAAMTAI 162
BLAST of FC930852 vs. ExPASy Swiss-Prot
Match: THS_METJA (Thermosome subunit OS=Methanocaldococcus jannaschii GN=ths PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 2.270e-24 Identity = 56/142 (39.44%), Postives = 90/142 (63.38%), Query Frame = 1 Query: 217 ALHMNINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDEPDKEILKMVARTTL 642 A MNI A + + + ++T LGPKG KMLV GDI +T DG T+LKEM +++P A M+ A Q+ GDGTT+ V+ GEL++++E +D+ +HP V+++G+E+A+ ++ L+ V D E+LK +A T++ Sbjct: 23 AQRMNILAGRIIAETVRTTLGPKGMDKMLVDELGDIVVTNDGVTILKEMSVEHPAAKMLIEVAKTQEKEVGDGTTTAVVIAGELLRKAEELLDQNIHPSVIINGYEMARNKAVEELKSIAKEV---KPEDTEMLKKIAMTSI 161 The following BLAST results are available for this feature:
BLAST of FC930852 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 160
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930852 ID=FC930852; Name=FC930852; organism=Citrus clementina; type=EST; length=697bpback to top |