FC930852
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930852 vs. ExPASy Swiss-Prot
Match: TCPD_HUMAN (T-complex protein 1 subunit delta OS=Homo sapiens GN=CCT4 PE=1 SV=4) HSP 1 Score: 109.383 bits (272), Expect = 1.922e-23 Identity = 55/146 (37.67%), Postives = 87/146 (59.59%), Query Frame = 1 Query: 229 NINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDEPDKEILKMVARTTLRTSYTNHW 666 NI+AAK + D ++T+LGPKG KM+ G GD+ +T DG T+LK+MQ+ +P A M+ + AQD +GDGTTS VI G L+ + + +G+HP ++ + F+ A ++ L PV + D+E L A T+L + + + Sbjct: 37 NISAAKAVADAIRTSLGPKGMDKMIQDGKGDVTITNDGATILKQMQVLHPAARMLVELSKAQDIEAGDGTTSVVIIAGSLLDSCTKLLQKGIHPTIISESFQKALEKGIEILTDMSRPVELS---DRETLLNSATTSLNSKVVSQY 179
BLAST of FC930852 vs. ExPASy Swiss-Prot
Match: THS_METKA (Thermosome subunit OS=Methanopyrus kandleri GN=ths PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 4.282e-23 Identity = 55/142 (38.73%), Postives = 86/142 (60.56%), Query Frame = 1 Query: 217 ALHMNINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDEPDKEILKMVARTTL 642 A MNI AA+ + + ++T LGP G KMLV GD+ +T DG T+L+EM I++P A M+ A Q+D GDGTT+ V+ GEL+ ++E + + +HP V+ G+ +A + LE+ + D D+E LK +A+T + Sbjct: 26 AQRMNIMAARVVAETVRTTLGPMGMDKMLVDEMGDVVVTNDGVTILEEMDIEHPAAKMVVEVAKTQEDEVGDGTTTAVVLAGELLHKAEDLLQQDIHPTVIARGYRMAVEKAEEILEEIAEEI---DPDDEETLKKIAKTAM 164
BLAST of FC930852 vs. ExPASy Swiss-Prot
Match: THSB_SULSO (Thermosome subunit beta OS=Sulfolobus solfataricus GN=thsB PE=3 SV=2) HSP 1 Score: 108.227 bits (269), Expect = 4.282e-23 Identity = 54/142 (38.03%), Postives = 89/142 (62.68%), Query Frame = 1 Query: 217 ALHMNINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDEPDKEILKMVARTTL 642 AL NI A K +++ LK+ GP+G KMLV GDI +T DG T+L +M +Q+PT ++ + A QD+ + DGT + VI GEL K++E + + +HP ++V G++ A+ L+ +++ PV + D ++L+ VA T+L Sbjct: 30 ALRANIAAVKAIEEALKSTYGPRGMDKMLVDSLGDITITNDGATILDKMDLQHPTGKLLVQIAKGQDEETADGTKTAVILAGELAKKAEDLLYKEIHPTIIVSGYKKAEEIALKTIQEIAQPVTIN---DTDVLRKVALTSL 168
BLAST of FC930852 vs. ExPASy Swiss-Prot
Match: THSA_THEK1 (Thermosome subunit alpha OS=Thermococcus sp. (strain KS-1) GN=thsA PE=1 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 4.282e-23 Identity = 53/142 (37.32%), Postives = 88/142 (61.97%), Query Frame = 1 Query: 217 ALHMNINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDEPDKEILKMVARTTL 642 A +NI AA+ + + ++T LGPKG KMLV GDI +T DG T+L ++ +Q+P A M+ A QD +GDGTT+ V+ GEL++++E +D+ +HP +++ G+ +A + L++ V D D+E L +A T++ Sbjct: 24 AQRLNILAARIIAETVRTTLGPKGMDKMLVDSLGDIVVTNDGATILDKIDLQHPAAKMMVEVAKTQDKEAGDGTTTAVVIAGELLRKAEELLDQNIHPSIIIKGYALAAEKAQEILDEIAIRV---DPDDEETLLKIAATSI 162
BLAST of FC930852 vs. ExPASy Swiss-Prot
Match: THSA_SULTO (Thermosome subunit alpha OS=Sulfolobus tokodaii GN=thsA PE=1 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 4.282e-23 Identity = 53/149 (35.57%), Postives = 94/149 (63.09%), Query Frame = 1 Query: 217 ALHMNINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPV---VMGDEPDKEILKMVARTTLRTSY 654 AL NI AA L ++LK++LGP+G KML+ GD+ +T DG T++KEM+IQ+P A ++ A AQD GDGTTS V+ G L+ +++ +D+ +HP ++++G++ A +L+ +++ T + + ++ LK + TT+ + + Sbjct: 21 ALKNNILAAVTLAEMLKSSLGPRGLDKMLIDSFGDVTITNDGATIVKEMEIQHPAAKLLVEAAKAQDAEVGDGTTSAVVLAGLLLDKADDLLDQNIHPTIIIEGYKKALNKSLEIIDQLATKIDVSNLNSLATRDQLKKIVYTTMSSKF 169
BLAST of FC930852 vs. ExPASy Swiss-Prot
Match: THSA_PYRKO (Thermosome subunit alpha OS=Pyrococcus kodakaraensis GN=thsA PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 4.282e-23 Identity = 53/142 (37.32%), Postives = 88/142 (61.97%), Query Frame = 1 Query: 217 ALHMNINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDEPDKEILKMVARTTL 642 A +NI AA+ + + ++T LGPKG KMLV GDI +T DG T+L ++ +Q+P A M+ A QD +GDGTT+ V+ GEL++++E +D+ +HP +++ G+ +A + L++ V D D+E L +A T++ Sbjct: 24 AQRLNILAARIIAETVRTTLGPKGMDKMLVDSLGDIVVTNDGATILDKIDLQHPAAKMMVEVAKTQDKEAGDGTTTAVVIAGELLRKAEELLDQNIHPSIIIKGYALAAEKAQEILDEIAIRV---DPDDEETLLKIAATSI 162
BLAST of FC930852 vs. ExPASy Swiss-Prot
Match: TCPG_XENLA (T-complex protein 1 subunit gamma OS=Xenopus laevis GN=cct3 PE=2 SV=2) HSP 1 Score: 108.227 bits (269), Expect = 4.282e-23 Identity = 52/146 (35.62%), Postives = 88/146 (60.27%), Query Frame = 1 Query: 229 NINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDEPDKEILKMVARTTLRTSYTNHW 666 NINAAK + D+++T LGP+ +KML+ G I +T DGN +L+E+Q+Q+P A + + QD+ GDGTTS +I GE++ +E+ +++ MHP V++ + A + L++ TPV D D+E++ + + + T W Sbjct: 25 NINAAKTIADIIRTCLGPRAMMKMLLDPMGGIVMTNDGNAILREIQVQHPAAKSMIEISRTQDEEVGDGTTSVIILAGEMLSVAEQFLEQQMHPTVIISAYRKALDDMVNTLKEISTPV---DTNDRELMLKIINSAINTKAIKLW 167
BLAST of FC930852 vs. ExPASy Swiss-Prot
Match: TCPE_PONAB (T-complex protein 1 subunit epsilon OS=Pongo abelii GN=CCT5 PE=2 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 4.282e-23 Identity = 56/148 (37.84%), Postives = 89/148 (60.14%), Query Frame = 1 Query: 217 ALHMNINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDEPDKEILKMVARTTLRTSYTN 660 AL +I AAK + + ++T+LGP G KM+V GD+ +T DG T+L M + + A ++ + +QDD GDGTT V+ G L++++E+ +D G+HP + DG+E A R ++ L+K V++ D D E L A+TTL + N Sbjct: 33 ALKSHIMAAKAVANTMRTSLGPNGLDKMMVDKDGDVTVTNDGATILSMMDVDHQIAKLMVELSKSQDDEIGDGTTGVVVLAGALLEEAEQLLDRGIHPIRIADGYEQAARVAIEHLDKISDSVLV-DIKDTEPLIQTAKTTLGSKVVN 179
BLAST of FC930852 vs. ExPASy Swiss-Prot
Match: TCPE_MACFA (T-complex protein 1 subunit epsilon OS=Macaca fascicularis GN=CCT5 PE=2 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 4.282e-23 Identity = 56/148 (37.84%), Postives = 89/148 (60.14%), Query Frame = 1 Query: 217 ALHMNINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDEPDKEILKMVARTTLRTSYTN 660 AL +I AAK + + ++T+LGP G KM+V GD+ +T DG T+L M + + A ++ + +QDD GDGTT V+ G L++++E+ +D G+HP + DG+E A R ++ L+K V++ D D E L A+TTL + N Sbjct: 33 ALKSHIMAAKAVANTMRTSLGPNGLDKMMVDKDGDVTVTNDGATILSMMDVDHQIAKLMVELSKSQDDEIGDGTTGVVVLAGALLEEAEQLLDRGIHPIRIADGYEQAARVAIEHLDKISDSVLV-DIKDTEPLIQTAKTTLGSKVVN 179
BLAST of FC930852 vs. ExPASy Swiss-Prot
Match: TCPE_HUMAN (T-complex protein 1 subunit epsilon OS=Homo sapiens GN=CCT5 PE=1 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 4.282e-23 Identity = 56/148 (37.84%), Postives = 89/148 (60.14%), Query Frame = 1 Query: 217 ALHMNINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDEPDKEILKMVARTTLRTSYTN 660 AL +I AAK + + ++T+LGP G KM+V GD+ +T DG T+L M + + A ++ + +QDD GDGTT V+ G L++++E+ +D G+HP + DG+E A R ++ L+K V++ D D E L A+TTL + N Sbjct: 33 ALKSHIMAAKAVANTMRTSLGPNGLDKMMVDKDGDVTVTNDGATILSMMDVDHQIAKLMVELSKSQDDEIGDGTTGVVVLAGALLEEAEQLLDRGIHPIRIADGYEQAARVAIEHLDKISDSVLV-DIKDTEPLIQTAKTTLGSKVVN 179 The following BLAST results are available for this feature:
BLAST of FC930852 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 160
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930852 ID=FC930852; Name=FC930852; organism=Citrus clementina; type=EST; length=697bpback to top |