FC930852
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930852 vs. ExPASy Swiss-Prot
Match: TCPG_BOVIN (T-complex protein 1 subunit gamma OS=Bos taurus GN=CCT3 PE=2 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.125e-22 Identity = 51/146 (34.93%), Postives = 87/146 (59.59%), Query Frame = 1 Query: 229 NINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDEPDKEILKMVARTTLRTSYTNHW 666 NINAAK + D+++T LGPK +KML+ G I +T DGN +L+E+Q+Q+P A + + QD+ GDGTTS +I GE++ +E +++ MHP V++ + A + L+K PV D +++ + + +++ T + W Sbjct: 26 NINAAKTIADIIRTCLGPKSMMKMLLDPMGGIVMTNDGNAILREIQVQHPAAKSMIEISRTQDEEVGDGTTSVIILAGEMLSVAEHFLEQQMHPTVVISAYRKALDDMISTLKKISIPV---DTSNRDTMLNIINSSITTKVISRW 168
BLAST of FC930852 vs. ExPASy Swiss-Prot
Match: TCPD_AEDTR (T-complex protein 1 subunit delta OS=Aedes triseriatus PE=2 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.125e-22 Identity = 53/140 (37.86%), Postives = 83/140 (59.29%), Query Frame = 1 Query: 229 NINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDEPDKEILKMVARTTLRT 648 NINAAK + D ++T+LGP+G KM+ G++ +T DG T+LK+M + +P A M+ + AQD +GDGTTS V+ G L+K E+ + G+HP + D F+ + L + TP+ + D+E L A T+L + Sbjct: 30 NINAAKAVSDAIRTSLGPRGMDKMIQAANGEVTITNDGATILKQMNVIHPAAKMLVELSRAQDVEAGDGTTSVVVVAGALLKAVEKLLQMGIHPTAISDAFQKCSAKAVDILTEMSTPIEL---TDRESLVKSASTSLNS 166
BLAST of FC930852 vs. ExPASy Swiss-Prot
Match: THSB_SULSH (Thermosome subunit beta OS=Sulfolobus shibatae GN=thsB PE=1 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 3.625e-22 Identity = 53/142 (37.32%), Postives = 87/142 (61.27%), Query Frame = 1 Query: 217 ALHMNINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDEPDKEILKMVARTTL 642 AL NI A K +++ LK+ GP+G KM V GDI +T DG T+L +M +Q+PT ++ + A QD+ + DGT + VI GEL K++E + + +HP ++V G++ A+ L+ ++ PV + D ++L+ VA T+L Sbjct: 30 ALRANIAAVKAIEEALKSTYGPRGMDKMFVDSLGDITITNDGATILDKMDLQHPTGKLLVQIAKGQDEETADGTKTAVILAGELAKKAEDLLYKEIHPTIIVSGYKKAEEIALKTIQDIAQPVSIN---DTDVLRKVALTSL 168
BLAST of FC930852 vs. ExPASy Swiss-Prot
Match: THS1_HALVO (Thermosome subunit 1 OS=Halobacterium volcanii GN=cct1 PE=2 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 3.625e-22 Identity = 59/165 (35.76%), Postives = 88/165 (53.33%), Query Frame = 1 Query: 148 KRRNRTMSLRVLNPNAEVLNKSAALHMNINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDEPDKEILKMVARTTL 642 +R + + +L +++ + A MNI A K + + ++T LGPKG KMLV G + +T DG T+LKEM I +P A MI + Q+D GDGTT+ VI GEL+ Q+E +D +H + G+ A + LE V E D+E L +A T + Sbjct: 3 QRMQQGQPMIILGEDSQRTSGQDAQSMNITAGKAVAEAVRTTLGPKGMDKMLVDSGGQVVVTNDGVTILKEMDIDHPAANMIVEVSETQEDEVGDGTTTAVINAGELLDQAEDLLDSDVHATTIAQGYRQAAEKAKEVLEDNAIEVT---EDDRETLTKIAATAM 164
BLAST of FC930852 vs. ExPASy Swiss-Prot
Match: TCPH_TETPY (T-complex protein 1 subunit eta OS=Tetrahymena pyriformis PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 4.734e-22 Identity = 57/168 (33.93%), Postives = 96/168 (57.14%), Query Frame = 1 Query: 169 SLRVLNPNAEVLNKSAALHMNINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVV-MGDEPDKEILKMVARTTLRTSYTNHWQ 669 ++ +L + A + NINA + + +++KT LGP+G K++ G G ++ DG T+L + I +P A + A AQDD GDGTTS + GEL+K+S+ I+EGMHP+++ G++ A + L FL++ V D +E+L A+T+L + H++ Sbjct: 5 TILLLKDGTDTSQGKAQIISNINAVQSIVEIVKTTLGPRGMDKLIEGNRG-ATISNDGATILNLLDIVHPAAKTLVDIAKAQDDEVGDGTTSVCLLAGELLKESKNFIEEGMHPQIVTKGYKEALKLALTFLQENSYSVADKSDGEKREMLLKCAQTSLNSKLLAHYK 171
BLAST of FC930852 vs. ExPASy Swiss-Prot
Match: TCPD_YEAST (T-complex protein 1 subunit delta OS=Saccharomyces cerevisiae GN=CCT4 PE=1 SV=2) HSP 1 Score: 104.76 bits (260), Expect = 4.734e-22 Identity = 54/146 (36.99%), Postives = 89/146 (60.96%), Query Frame = 1 Query: 229 NINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDEPDKEILKMVARTTLRTSYTNHW 666 NI AA+ + D ++T+LGPKG KM+ G+I ++ DG+T+LK+M I +P A M+ + AQD +GDGTTS VI G L+ +ER +++G+HP ++ D F+ A + ++ L + V + D+E L A T+L + + + Sbjct: 24 NIIAARSVADAIRTSLGPKGMDKMIKTSRGEIIISNDGHTILKQMAILHPVARMLVEVSAAQDSEAGDGTTSVVILTGALLGAAERLLNKGIHPTIIADSFQSAAKRSVDILLEMCHKVSLS---DREQLVRAASTSLSSKIVSQY 166
BLAST of FC930852 vs. ExPASy Swiss-Prot
Match: TCPD_KLULA (T-complex protein 1 subunit delta OS=Kluyveromyces lactis GN=CCT4 PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 4.734e-22 Identity = 54/138 (39.13%), Postives = 86/138 (62.32%), Query Frame = 1 Query: 229 NINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDEPDKEILKMVARTTL 642 NI AA+ + D ++T+LGPKG KM+ GDI ++ DG+T+LK+M I +P A M+ + AQD +GDGTTS VI G L+ +E+ +++G+HP ++ + F+ A +++ L T + + DKE L A T+L Sbjct: 26 NIIAARAVADAIRTSLGPKGMDKMIKTSRGDIIISNDGHTILKQMAILHPVAKMLVEVSGAQDVEAGDGTTSVVIMTGALLGAAEKLLNKGIHPTIIAESFQRAAERSVEILLNMSTKISL---DDKEALVRAASTSL 160
BLAST of FC930852 vs. ExPASy Swiss-Prot
Match: TCPD_CANGA (T-complex protein 1 subunit delta OS=Candida glabrata GN=CCT4 PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 4.734e-22 Identity = 54/146 (36.99%), Postives = 90/146 (61.64%), Query Frame = 1 Query: 229 NINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDEPDKEILKMVARTTLRTSYTNHW 666 NI AA+ + D ++T+LGPKG KM+ G+I ++ DG+T+LK+M I +P A M+ + AQD +GDGTTS VI G L+ ++R +++G+HP ++ + F+ A R +++ L + PV + D D L A T+L + + + Sbjct: 25 NIVAARAVADAIRTSLGPKGMDKMIKTSRGEIIISNDGHTILKQMAILHPVAKMLVDVSAAQDSEAGDGTTSVVILTGALLGAADRLLNKGIHPTIIAESFQKAARRSVETLLEICHPVSLDDRED---LIRAASTSLSSKIVSQY 167
BLAST of FC930852 vs. ExPASy Swiss-Prot
Match: THSB_THEAC (Thermosome subunit beta OS=Thermoplasma acidophilum GN=thsB PE=1 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.055e-21 Identity = 51/144 (35.42%), Postives = 89/144 (61.81%), Query Frame = 1 Query: 217 ALHMNINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDEPDKEILKMVARTTLRT 648 A+ NI AA + + ++++LGP+G KMLV GDI +T DG T+LKEM +++P A M+ + QD GDGTT+ VI G L++Q++ I++ +HP V+ +G+ +A + +++ T + +K +L +A+T+L + Sbjct: 22 AMKENIEAAIAISNSVRSSLGPRGMDKMLVDSLGDIVITNDGVTILKEMDVEHPAAKMMVEVSKTQDSFVGDGTTTAVIIAGGLLQQAQGLINQNVHPTVISEGYRMASEEAKRVIDEISTKI---GADEKALLLKMAQTSLNS 162
BLAST of FC930852 vs. ExPASy Swiss-Prot
Match: TCPG_MACFA (T-complex protein 1 subunit gamma OS=Macaca fascicularis GN=CCT3 PE=2 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.055e-21 Identity = 51/146 (34.93%), Postives = 86/146 (58.90%), Query Frame = 1 Query: 229 NINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDEPDKEILKMVARTTLRTSYTNHW 666 NINAAK + D+++T LGPK +KML+ G I +T DGN +L+E+Q+Q+P A + + QD+ G GTTS +I GE++ +E +++ MHP V++ + A + L+K PV D D +++ + +++ T + W Sbjct: 26 NINAAKTIADIIRTCLGPKSMMKMLLDPMGGIVMTNDGNAILREIQVQHPAAKSMIEISRTQDEEVGGGTTSVIILAGEMLSVAEHFLEQQMHPTVVISAYRKALDDMISTLKKISIPV---DINDSDMMLNIINSSITTKAISRW 168 The following BLAST results are available for this feature:
BLAST of FC930852 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 160
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC930852 ID=FC930852; Name=FC930852; organism=Citrus clementina; type=EST; length=697bpback to top |