FC930852
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930852 vs. ExPASy Swiss-Prot
Match: TCPE_ARATH (T-complex protein 1 subunit epsilon OS=Arabidopsis thaliana GN=At1g24510 PE=2 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.377e-21 Identity = 55/144 (38.19%), Postives = 84/144 (58.33%), Query Frame = 1 Query: 229 NINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDEPDKEILKMVARTTLRTSYTN 660 NI A K + +L+++LGPKG KML G GDI +T DG T+L++M + N A ++ + +QD GDGTT V+ G L++Q+ER +D G+HP + +G+E+A R ++ LE+ D + E L TTL + N Sbjct: 33 NIAAGKAVARILRSSLGPKGMDKMLQGPDGDITITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGALLEQAERQLDRGIHPIRIAEGYEMASRVAVEHLERIAQKFEF-DVNNYEPLVQTCMTTLSSKIVN 175
BLAST of FC930852 vs. ExPASy Swiss-Prot
Match: THSA_HALSA (Thermosome subunit alpha OS=Halobacterium salinarium GN=thsA PE=3 SV=2) HSP 1 Score: 102.064 bits (253), Expect = 3.069e-21 Identity = 56/157 (35.67%), Postives = 89/157 (56.69%), Query Frame = 1 Query: 172 LRVLNPNAEVLNKSAALHMNINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDEPDKEILKMVARTTL 642 L VL+ +++ + A MNI A K + + ++T LGPKG KMLV +G++ +T DG T+LKEM I++P A MI A Q+ GDGTT++V+ GEL+ ++E +++ +H L G+ A + L+ V D E L+ +A T + Sbjct: 10 LIVLSEDSQRTSGEDAQSMNITAGKAVAESVRTTLGPKGMDKMLVDSSGEVVVTNDGVTILKEMDIEHPAANMIVEVAETQETEVGDGTTTSVVVSGELLSEAETLLEQDIHATTLAQGYRQAAEKAKELLDDAAIDV---SADDTETLEKIAATAM 163
BLAST of FC930852 vs. ExPASy Swiss-Prot
Match: TCPD_YARLI (T-complex protein 1 subunit delta OS=Yarrowia lipolytica GN=CCT4 PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 4.008e-21 Identity = 48/146 (32.88%), Postives = 86/146 (58.90%), Query Frame = 1 Query: 229 NINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDEPDKEILKMVARTTLRTSYTNHW 666 NI AA+ + D ++T+LGPKG KM+ G + ++ DGNT+L+ M + +P A M+ + +QD ++GDGTTS VI G L+ +++ + +G+HP ++ + F+ A + + + P+ D D+E L A T+L + + + Sbjct: 24 NILAARAVADAIRTSLGPKGMDKMIQTARGQVIISNDGNTILQHMAVMHPAAKMLVDLSASQDSVAGDGTTSVVILAGSLLGAADKLLKKGIHPSIIAENFQKAAQRAAEVVMDMSKPI---DLSDRETLIRAASTSLNSKIVSQF 166
BLAST of FC930852 vs. ExPASy Swiss-Prot
Match: TCPE_CAEEL (T-complex protein 1 subunit epsilon OS=Caenorhabditis elegans GN=cct-5 PE=1 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 5.234e-21 Identity = 54/150 (36.00%), Postives = 92/150 (61.33%), Query Frame = 1 Query: 217 ALHMNINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKF--KTPVVMGDEPDKEILKMVARTTLRTSYTN 660 A+ +I AA+ + + L+T+LGP+G KMLV GD+ +T DG T++++M +Q+ A ++ + +QD GDGTT V+ G L++++E+ ID G+HP + DGF++A + L+ L+ K PV ++E L A+T+L + N Sbjct: 34 AVKSHILAARAVANTLRTSLGPRGLDKMLVSPDGDVTITNDGATIMEKMDVQHHVAKLMVELSKSQDHEIGDGTTGVVVLAGALLEEAEKLIDRGIHPIKIADGFDLACKKALETLDSISDKFPV-----ENRERLVETAQTSLGSKIVN 178
BLAST of FC930852 vs. ExPASy Swiss-Prot
Match: TCPD_CAEEL (T-complex protein 1 subunit delta OS=Caenorhabditis elegans GN=cct-4 PE=2 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 5.234e-21 Identity = 50/140 (35.71%), Postives = 85/140 (60.71%), Query Frame = 1 Query: 229 NINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDEPDKEILKMVARTTLRT 648 NI AAK + D ++T+LGP+G KM+ G GD+ +T DG T+L +M + +PTA M+ + AQD +GDGTT+ V+ G L+ ++ + +G+HP + + F+ A + L++ +PV D + +L +A T+L + Sbjct: 36 NIVAAKAVADAVRTSLGPRGMDKMIQSGNGDVTITNDGATILNQMSVIHPTAKMLVELSKAQDIEAGDGTTTVVVMAGALLDAAQNLLSKGIHPTTISESFQSAAAEAEKILDEMSSPV---DLSNDALLNKMATTSLNS 172
BLAST of FC930852 vs. ExPASy Swiss-Prot
Match: THSG_SULSO (Thermosome subunit gamma OS=Sulfolobus solfataricus GN=thsC PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 8.928e-21 Identity = 53/142 (37.32%), Postives = 90/142 (63.38%), Query Frame = 1 Query: 229 NINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDEPDKEILKMVARTTLRTSY 654 NI AK L ++LK++LGPKG KMLV G D+ +T DG T++K M++Q+PTA ++ TA D GDGTTS V+ G L++++E +++ +HP V+++G+ A ++L+ L+ + D++I+ + TTL + + Sbjct: 21 NIAVAKILLEMLKSSLGPKGLDKMLVEGQ-DVTITNDGATIVKNMEVQHPTAKLLIETAKTVDTEVGDGTTSVVVLAGLLLEKAEDLLNQKIHPTVIIEGYRKALNSSLELLKNIADKI---SPEDRKIVHDLVYTTLSSKF 158
BLAST of FC930852 vs. ExPASy Swiss-Prot
Match: THSG_SULSH (Thermosome subunit gamma OS=Sulfolobus shibatae GN=thsC PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 8.928e-21 Identity = 54/142 (38.03%), Postives = 90/142 (63.38%), Query Frame = 1 Query: 229 NINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDEPDKEILKMVARTTLRTSY 654 NI AK L ++LK++LGPKG KMLV G DI +T DG T++K M++Q+PTA ++ TA D GDGTTS V+ G L++++E +++ +HP V+++G+ A ++L+ L+ + D++I+ + TTL + + Sbjct: 21 NIAVAKILLEMLKSSLGPKGLDKMLVEGQ-DITITNDGATIVKNMEVQHPTAKLLIETAKTVDTEVGDGTTSVVVLAGLLLEKAEDLLNQKIHPTVIIEGYRKALSSSLELLKSIADKI---SPEDRKIVHDLVYTTLSSKF 158
BLAST of FC930852 vs. ExPASy Swiss-Prot
Match: THS3_HALVO (Thermosome subunit 3 OS=Halobacterium volcanii GN=cct3 PE=2 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 8.928e-21 Identity = 48/143 (33.57%), Postives = 86/143 (60.14%), Query Frame = 1 Query: 214 AALHMNINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDEPDKEILKMVARTTL 642 +A NI A K + + ++T LGP+G KMLV +G++ +T DG T+L++M I++P A M+ + Q++ GDGTT+ + GEL+ +E +D+ +HP V+V+G+ A R ++ V + D ++L+ VA +++ Sbjct: 23 SAQDSNIRAGKAVAEAVRTTLGPRGMDKMLVDSSGEVVITNDGATILEKMDIEHPAAQMLVEVSQTQEEEVGDGTTTAAVLTGELLAHAEDLLDDDLHPTVIVEGYTEAARIAQDAIDDMVLDVTL----DDDLLRKVAESSM 161
BLAST of FC930852 vs. ExPASy Swiss-Prot
Match: TCPG_SCHPO (T-complex protein 1 subunit gamma OS=Schizosaccharomyces pombe GN=cct3 PE=1 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.166e-20 Identity = 54/163 (33.13%), Postives = 90/163 (55.21%), Query Frame = 1 Query: 178 VLNPNAEVLNKSAALHMNINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDEPDKEILKMVARTTLRTSYTNHW 666 V+N N A NI AAK + DV++T LGP+ +KML+ G + LT DG+ +L+E+++ +P A + A QD+ GDGTTS +I GE++ + +D +HP V++ F+ A L +++ PV + D + E+ +++ RT + T W Sbjct: 7 VMNTNGNRQVGHKAQMSNIQAAKAVADVIRTCLGPRAMLKMLLDPVGSVLLTNDGHAILREIEVAHPAAKSMIELARTQDEEVGDGTTSVIILAGEILAAASPLLDRKIHPVVMIRSFKQALEDALSIIDEITLPVNVDD--NAEMFRLI-RTCIGTKLVARW 166
BLAST of FC930852 vs. ExPASy Swiss-Prot
Match: TCPE_DICDI (T-complex protein 1 subunit epsilon OS=Dictyostelium discoideum GN=cct5 PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.523e-20 Identity = 55/162 (33.95%), Postives = 95/162 (58.64%), Query Frame = 1 Query: 196 EVLNKSAALHMNINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDEPDKEILKMVARTTLRTSYTN--HWQIS 675 E L A +I AAK + +++K++LGPKG KM+V G++ +T DG T+L+ MQ+ N A ++ + + +QDD GDGTT V+ G L++Q+E+ I++G+HP + +G+E A + + L+ + + + ++K A T L + N H Q+S Sbjct: 22 ERLRGIEAHRSHILAAKTISNIMKSSLGPKGMDKMMVSQDGEVLVTNDGATILENMQVDNQIAKLMVQLSKSQDDEIGDGTTGVVVLAGSLLEQAEQLIEKGIHPCRIYEGYETACKIATEHLKTISDSIEFSKDNIEPLIK-TAMTCLGSKIVNRFHRQMS 182 The following BLAST results are available for this feature:
BLAST of FC930852 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 160
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930852 ID=FC930852; Name=FC930852; organism=Citrus clementina; type=EST; length=697bpback to top |