FC930852
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930852 vs. ExPASy Swiss-Prot
Match: TCPD_SCHPO (T-complex protein 1 subunit delta OS=Schizosaccharomyces pombe GN=cct4 PE=2 SV=2) HSP 1 Score: 99.7525 bits (247), Expect = 1.523e-20 Identity = 51/146 (34.93%), Postives = 87/146 (59.59%), Query Frame = 1 Query: 229 NINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDEPDKEILKMVARTTLRTSYTNHW 666 NI AA+ + D ++T+LGPKG KM+ G G++ LT DG T+LK + + +P A M+ + AQD +GDGTTS VI G ++ +E+ + +G+HP V+ + F+ A T+ +++ + + D+E L A T+L + + + Sbjct: 24 NIMAARSVADAIRTSLGPKGMDKMIQTGKGEVILTNDGATILKHLSVLHPAAKMLVDLSAAQDVEAGDGTTSVVILAGSMLACAEKLLKKGIHPTVIAESFQRAAGFTVDCMKENALAIELS---DRESLLRAATTSLNSKIVSQY 166
BLAST of FC930852 vs. ExPASy Swiss-Prot
Match: TCPG_THAWE (T-complex protein 1 subunit gamma OS=Thalassiosira weissflogii PE=2 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.598e-20 Identity = 51/165 (30.91%), Postives = 91/165 (55.15%), Query Frame = 1 Query: 172 LRVLNPNAEVLNKSAALHMNINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDEPDKEILKMVARTTLRTSYTNHW 666 + VLN + A NI AA+ + D++++ LGP+ +KML+ G I +T DGN +L+E+ + +PTA + + A D+ GDGTTS +I GE++ +E + +HP ++V G+ A + L E++ V D D E +K + ++ + +++ W Sbjct: 9 IMVLNSKTQRSTGRQAQLGNIQAARAVADIIRSTLGPRSMLKMLLDPMGGIVITNDGNCILREVDVSHPTAKSMIELSRAHDEEVGDGTTSVIILAGEMLINAEPFVRTNIHPTIIVRGYNYALQEALTICEEWALVV---DVHDSERVKSLVQSCIGAKFSSRW 170
BLAST of FC930852 vs. ExPASy Swiss-Prot
Match: TCPG_TETPY (T-complex protein 1 subunit gamma OS=Tetrahymena pyriformis PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.598e-20 Identity = 50/165 (30.30%), Postives = 96/165 (58.18%), Query Frame = 1 Query: 172 LRVLNPNAEVLNKSAALHMNINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDEPDKEILKMVARTTLRTSYTNHW 666 + VLN N + + A NI+A+K + +++ + LGP+ +KML+ G I +T DGN +L+E+ + +P A + A QD+ GDGTTS +I GE+M ++ I+ +HP ++V + A +++ +E+ P+ + + D ++ K ++ + + T +T+ W Sbjct: 9 IMVLNQNTKRESGKKAQLANISASKAVSEIVTSTLGPRSMLKMLLDPMGGIVMTNDGNAILREIDVNHPAAKSMIELARVQDEEVGDGTTSVIIMAGEMMSAAKPFIERDIHPSIIVTAYYRALEESIKKIEELAVPIDVNN--DDQVNKALS-SCIGTKFTSRW 170
BLAST of FC930852 vs. ExPASy Swiss-Prot
Match: TCPE1_AVESA (T-complex protein 1 subunit epsilon OS=Avena sativa PE=2 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.598e-20 Identity = 53/138 (38.41%), Postives = 79/138 (57.25%), Query Frame = 1 Query: 229 NINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDEPDKEILKMVARTTL 642 NI AAK + +L+T+LGPKG KML GD+ +T DG T+L+ M + N A ++ + +QD GDGTT V+ G L++Q+E+ ++ G+HP + +G+E+A R + LE T D E L TTL Sbjct: 33 NIAAAKAIARILRTSLGPKGMDKMLQSPDGDVTITNDGATILELMDVDNQIAKLLVELSRSQDYDIGDGTTGVVVMAGALLEQAEKLLERGIHPIRVAEGYEMASRIAVDHLESISTKYEF-SATDIEPLVQTCMTTL 169
BLAST of FC930852 vs. ExPASy Swiss-Prot
Match: TCPB_CAEEL (T-complex protein 1 subunit beta OS=Caenorhabditis elegans GN=cct-2 PE=2 SV=2) HSP 1 Score: 98.9821 bits (245), Expect = 2.598e-20 Identity = 55/163 (33.74%), Postives = 96/163 (58.90%), Query Frame = 1 Query: 166 MSLRVLNPNAEVLNKSAALHMNINAAKGLQDVLKTNLGPKGTIKMLVGG----AGDIKLTKDGNTLLKEMQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDEPDKEILKMVARTTL 642 + +++L NA+ +A + A + D++K+ LGPKG K+L+ G AG IK+T DG T+LK + + NP A ++ ++ QD GDGTTS + EL+K++E+ +++ +HP+ ++ G+ A + L+ K+ + GD ++LK +ARTTL Sbjct: 2 LPVQILKDNAQEERGESARLSSFVGAIAIGDLVKSTLGPKGMDKILISGNPESAGGIKVTNDGATILKSIGVDNPAAKVLVDMSMTQDHEVGDGTTSVTVLAAELLKEAEKLVNQRIHPQTIISGYRRALGIAQESLK--KSSIESGDNIRDDLLK-IARTTL 161
BLAST of FC930852 vs. ExPASy Swiss-Prot
Match: TCPG_DICDI (T-complex protein 1 subunit gamma OS=Dictyostelium discoideum GN=cct3 PE=1 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 4.431e-20 Identity = 53/163 (32.52%), Postives = 92/163 (56.44%), Query Frame = 1 Query: 178 VLNPNAEVLNKSAALHMNINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDEPDKEILKMVARTTLRTSYTNHW 666 VLN NA+ N+ A A K + ++KT LGPK +KM++ G +T DGN +L+E+ + +P A + + AQD+ GDGTTS VI E++ SE I++ +HP ++ F +A +L ++++ + + + P E+LK+V ++ + T + W Sbjct: 7 VLNTNAKRENQKEAQQGIFLAVKSVASIIKTCLGPKAMLKMILDPMGTTVVTNDGNAILREIDVTHPAAKSMIELSRAQDENVGDGTTSVVILAAEVLASSELFIEKKIHPHYIIKAFRMALDDSLSIVDQYSVAIDLKNRP--EVLKVV-QSCIGTKFIGKW 166
BLAST of FC930852 vs. ExPASy Swiss-Prot
Match: TCPD_ASHGO (T-complex protein 1 subunit delta OS=Ashbya gossypii GN=CCT4 PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 5.787e-20 Identity = 50/146 (34.25%), Postives = 86/146 (58.90%), Query Frame = 1 Query: 229 NINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDEPDKEILKMVARTTLRTSYTNHW 666 NI AA+ + D ++T+LGPKG KM+ G+I ++ DG+T+LK+M I +P A M+ + AQD +GDGTTS VI G L+ +E+ + +G+HP ++ + F+ A + ++ L + + D + L A T+L + + + Sbjct: 25 NIIAARAVADAIRTSLGPKGMDKMIKTARGEILISNDGHTILKQMAILHPVAKMLVEVSAAQDSEAGDGTTSVVILTGALLGAAEKLLAKGIHPTIIAESFQRAGQRAVEVLLGMSKRISLQDRAE---LVRAASTSLSSKIVSQY 167
BLAST of FC930852 vs. ExPASy Swiss-Prot
Match: TCPA_DROME (T-complex protein 1 subunit alpha OS=Drosophila melanogaster GN=T-cp1 PE=2 SV=2) HSP 1 Score: 97.4413 bits (241), Expect = 7.558e-20 Identity = 47/138 (34.06%), Postives = 86/138 (62.32%), Query Frame = 1 Query: 229 NINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDEPDKEILKMVARTTL 642 N+ AA + +++K++LGP G KMLV GD+ +T DG T+L+ +++++P A ++ A QD+ GDGTTS VI EL+K ++ + + +HP ++ G+ IA + +++ + T V DE ++ L +A+T++ Sbjct: 24 NVMAALSISNIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILRLLEVEHPAAKVLVELAQLQDEEVGDGTTSVVILAAELLKNADELVKQKIHPTSIISGYRIACKEACKYISEHLTAPV--DELGRDSLINIAKTSM 159
BLAST of FC930852 vs. ExPASy Swiss-Prot
Match: TCPE2_AVESA (T-complex protein 1 subunit epsilon OS=Avena sativa PE=2 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 9.871e-20 Identity = 52/138 (37.68%), Postives = 78/138 (56.52%), Query Frame = 1 Query: 229 NINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDEPDKEILKMVARTTL 642 NI A K + +L+T+LGPKG KML GD+ +T DG T+L+ M + N A ++ + +QD GDGTT V+ G L++Q+E+ ++ G+HP + +G+E+A R + LE T D E L TTL Sbjct: 33 NIAAGKSVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILELMDVDNQIAKLMVELSRSQDYDIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRVAEGYEMASRIAVDHLESISTKYEF-SATDIEPLVQTCMTTL 169
BLAST of FC930852 vs. ExPASy Swiss-Prot
Match: TCPA_TETPY (T-complex protein 1 subunit alpha OS=Tetrahymena pyriformis PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 9.871e-20 Identity = 47/138 (34.06%), Postives = 84/138 (60.87%), Query Frame = 1 Query: 229 NINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDEPDKEILKMVARTTL 642 N+ A + +++K++LGP+G KMLV GD+ +T DG T+L+++++Q+P A +I + QD GDGTTS VI EL+K++ I +HP ++ GF+IA + ++++ + +E +E L A+T++ Sbjct: 21 NVTAVMAIANIVKSSLGPQGLDKMLVDDVGDVTITNDGATILRQLEVQHPAAKVIVELSQLQDKEVGDGTTSVVILAAELLKRANELIKNKVHPTSIITGFKIAAKEACTYIKEHL--AISVEELGREALINAAKTSM 156 The following BLAST results are available for this feature:
BLAST of FC930852 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 160
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930852 ID=FC930852; Name=FC930852; organism=Citrus clementina; type=EST; length=697bpback to top |