FC930852
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930852 vs. ExPASy Swiss-Prot
Match: TCPA1_MOUSE (T-complex protein 1 subunit alpha A OS=Mus musculus GN=Tcp1 PE=1 SV=2) HSP 1 Score: 96.2857 bits (238), Expect = 1.684e-19 Identity = 45/138 (32.61%), Postives = 85/138 (61.59%), Query Frame = 1 Query: 229 NINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDEPDKEILKMVARTTL 642 N+ AA + +++K++LGP G KMLV GD+ +T DG T+LK +++++P A ++ A QD GDGTTS VI EL+K ++ + + +HP ++ G+ +A + ++++ + ++ DE ++ L A+T++ Sbjct: 21 NVMAAASIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKLLEVEHPAAKVLCELADLQDKEVGDGTTSVVIIAAELLKNADELVKQKIHPTSVISGYRLACKEAVRYIN--ENLIINADELGRDCLTNTAKTSM 156
BLAST of FC930852 vs. ExPASy Swiss-Prot
Match: TCPA_PALPA (T-complex protein 1 subunit alpha OS=Paleosuchus palpebrosus GN=TCP1 PE=2 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.199e-19 Identity = 46/140 (32.86%), Postives = 86/140 (61.43%), Query Frame = 1 Query: 223 HMNINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDEPDKEILKMVARTTL 642 + N+ AA + +++K++LGP G KMLV GD+ +T DG T+LK +++++P A ++ A QD GDGTTS VI EL+K S+ + + +HP ++ G+ +A + ++++ + ++ DE ++ L A+T++ Sbjct: 22 NQNVTAAATIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKLLEVEHPAAKVLCELAELQDKEVGDGTTSVVIIAAELLKNSDELVKQKIHPTSIIGGYRLACKEAVRYIN--ENLIINTDELGRDCLINSAKTSM 159
BLAST of FC930852 vs. ExPASy Swiss-Prot
Match: TCPA_MONDO (T-complex protein 1 subunit alpha OS=Monodelphis domestica GN=TCP1 PE=2 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.199e-19 Identity = 46/138 (33.33%), Postives = 85/138 (61.59%), Query Frame = 1 Query: 229 NINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDEPDKEILKMVARTTL 642 N+ AA + +++K++LGP G KMLV GD+ +T DG T+LK +++++P A ++ A QD GDGTTS VI EL+K ++ + + +HP ++ G+ +A + ++++ + ++ DE K+ L A+T++ Sbjct: 21 NVMAAASIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKLLEVEHPAAKVLCELADLQDKEVGDGTTSVVIIAAELLKNADELVKQKIHPTSIIGGYRLACKEAVRYIN--ENLIINTDELGKDCLINAAKTSM 156
BLAST of FC930852 vs. ExPASy Swiss-Prot
Match: TCPG_YEAST (T-complex protein 1 subunit gamma OS=Saccharomyces cerevisiae GN=CCT3 PE=1 SV=2) HSP 1 Score: 95.5153 bits (236), Expect = 2.872e-19 Identity = 51/163 (31.29%), Postives = 90/163 (55.21%), Query Frame = 1 Query: 181 LNPNAEVLNKSAALHMNINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQ-SERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDEPDKEILKMVARTTLRTSYTNHW 666 +N + E A NI AAK + DV++T LGPK +KML+ G + LT DG+ +L+E+ + +P A + + QD+ GDGTT+ +I GE++ Q + I++ +HP +++ + A L+ +++ PV D + +K + + ++ T Y HW Sbjct: 8 MNASQERTTGRQAQISNITAAKAVADVIRTCLGPKAMLKMLLDPMGGLVLTNDGHAILREIDVAHPAAKSMLELSRTQDEEVGDGTTTVIILAGEILAQCAPYLIEKNIHPVIIIQALKKALTDALEVIKQVSKPV---DVENDAAMKKLIQASIGTKYVIHW 167
BLAST of FC930852 vs. ExPASy Swiss-Prot
Match: TCPE_SCHPO (T-complex protein 1 subunit epsilon OS=Schizosaccharomyces pombe GN=cct5 PE=2 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.872e-19 Identity = 48/142 (33.80%), Postives = 88/142 (61.97%), Query Frame = 1 Query: 217 ALHMNINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDEPDKEILKMVARTTL 642 A+ +I A K + ++++T+LGP+G K+L+ G+I +T DG T+L +M++++ A ++ + + +QDD GDGTT V+ G L++Q+E ID+G+HP + DG+E A + ++ L+ V E + + A+T+L Sbjct: 35 AVKSHILATKTVANIVRTSLGPRGLDKILISPDGEITVTNDGATILDQMEVEHQIAKLLVQLSKSQDDEIGDGTTGVVVLAGALLEQAEALIDKGIHPIRIADGYEKACQVAVKHLDAISDVVDFSPENTTNLFRS-AKTSL 175
BLAST of FC930852 vs. ExPASy Swiss-Prot
Match: TCPA_HUMAN (T-complex protein 1 subunit alpha OS=Homo sapiens GN=TCP1 PE=1 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 3.751e-19 Identity = 46/138 (33.33%), Postives = 85/138 (61.59%), Query Frame = 1 Query: 229 NINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDEPDKEILKMVARTTL 642 N+ AA + +++K++LGP G KMLV GD+ +T DG T+LK +++++P A ++ A QD GDGTTS VI EL+K ++ + + +HP ++ G+ +A + ++++ + +V DE ++ L A+T++ Sbjct: 21 NVMAAASIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKLLEVEHPAAKVLCELADLQDKEVGDGTTSVVIIAAELLKNADELVKQKIHPTSVISGYRLACKEAVRYIN--ENLIVNTDELGRDCLINAAKTSM 156
BLAST of FC930852 vs. ExPASy Swiss-Prot
Match: TCPA_RAT (T-complex protein 1 subunit alpha OS=Rattus norvegicus GN=Tcp1 PE=1 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 4.899e-19 Identity = 45/138 (32.61%), Postives = 85/138 (61.59%), Query Frame = 1 Query: 229 NINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDEPDKEILKMVARTTL 642 N+ AA + +++K++LGP G KMLV GD+ +T DG T+LK +++++P A ++ A QD GDGTTS VI EL+K ++ + + +HP ++ G+ +A + ++++ + ++ DE ++ L A+T++ Sbjct: 21 NVMAAASIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKLLEVEHPAAKVLCELADLQDKEVGDGTTSVVIIAAELLKNADELVKQKIHPTSVISGYRLACKEAVRYIN--ENLIINTDELGRDCLINAAKTSM 156
BLAST of FC930852 vs. ExPASy Swiss-Prot
Match: TCPA_CRIGR (T-complex protein 1 subunit alpha OS=Cricetulus griseus GN=TCP1 PE=2 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 4.899e-19 Identity = 45/138 (32.61%), Postives = 85/138 (61.59%), Query Frame = 1 Query: 229 NINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDEPDKEILKMVARTTL 642 N+ AA + +++K++LGP G KMLV GD+ +T DG T+LK +++++P A ++ A QD GDGTTS VI EL+K ++ + + +HP ++ G+ +A + ++++ + ++ DE ++ L A+T++ Sbjct: 21 NVMAAASIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKLLEVEHPAAKVLCELADLQDKEVGDGTTSVVIIAAELLKNADELVKQKIHPTSVISGYRLACKEAVRYIS--ENLIINTDELGRDCLINAAKTSM 156
BLAST of FC930852 vs. ExPASy Swiss-Prot
Match: TCPA_BOVIN (T-complex protein 1 subunit alpha OS=Bos taurus GN=TCP1 PE=2 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 4.899e-19 Identity = 45/138 (32.61%), Postives = 85/138 (61.59%), Query Frame = 1 Query: 229 NINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDEPDKEILKMVARTTL 642 N+ AA + +++K++LGP G KMLV GD+ +T DG T+LK +++++P A ++ A QD GDGTTS VI EL+K ++ + + +HP ++ G+ +A + ++++ + ++ DE ++ L A+T++ Sbjct: 21 NVMAAASIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKLLEVEHPAAKVLCELADLQDKEVGDGTTSVVIIAAELLKNADELVKQKIHPTSVISGYRLACKEAVRYIS--ENLIINTDELGRDCLINAAKTSM 156
BLAST of FC930852 vs. ExPASy Swiss-Prot
Match: TCPD_DICDI (T-complex protein 1 subunit delta OS=Dictyostelium discoideum GN=cct4 PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 6.398e-19 Identity = 50/148 (33.78%), Postives = 86/148 (58.11%), Query Frame = 1 Query: 229 NINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDEPDKEILKMVARTTLR----TSYTN 660 NI AA+ + D ++T+LGPKG KM++ ++ ++ DG T+L+ +++++P A M+A A AQD +GDGTTS + G L+ + + +G+HP ++ + F +A +L+ L PV + D+ L A T+L + YTN Sbjct: 31 NIVAARAVADAIRTSLGPKGMDKMIISPNNEVLISNDGATILQNLELRHPAAKMLAELAKAQDIEAGDGTTSVCVIAGSLLGAVSQLMAKGIHPSIISEAFNLALNKSLEVLVSMSVPVSL---TDRVSLVKSATTSLNSKVVSQYTN 175 The following BLAST results are available for this feature:
BLAST of FC930852 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 160
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930852 ID=FC930852; Name=FC930852; organism=Citrus clementina; type=EST; length=697bpback to top |