FC930912

Overview
NameFC930912
Unique NameFC930912
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length682
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of FC930912 vs. ExPASy Swiss-Prot
Match: KPRS_BLOFL (Ribose-phosphate pyrophosphokinase OS=Blochmannia floridanus GN=prs PE=3 SV=1)

HSP 1 Score: 64.3142 bits (155), Expect = 8.754e-11
Identity = 28/59 (47.46%), Postives = 43/59 (72.88%), Query Frame = 1 
Query:  463 IKLFSGTANPALSQEIACYMGVELGKINIKRFADGEIYVQLQESVRGCDVYLVQPTCPP 639
            +KLF+G A P L+Q IA  + + LG  ++ RF+DGE+ VQ+ E+VRG D++++Q TC P
Sbjct:    1 MKLFTGNAIPELAQRIADKLYITLGNASVGRFSDGEVSVQINENVRGGDIFIIQSTCAP 59

HSP 2 Score: 23.0978 bits (48), Expect = 8.754e-11
Identity = 9/20 (45.00%), Postives = 16/20 (80.00%), Query Frame = 2 
Query:  620 CSPPVLRHENLMELLIMIDA 679
            C+P    ++NL+EL++M+DA
Sbjct:   57 CAPT---NDNLIELIVMVDA 73
The following BLAST results are available for this feature:
BLAST of FC930912 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 91
Match NameE-valueIdentityDescription
KPRS_BLOFL8.754e-1147.46Ribose-phosphate pyrophosphokinase OS=Blochmannia ... [more]

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Properties
Property NameValue
Genbank descriptionC34110D05EF PostHarvP1 Citrus clementina cDNA clone C34110D05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930912 ID=FC930912; Name=FC930912; organism=Citrus clementina; type=EST; length=682bp
GGAAAATCAAAGCGACGAAGCAAAATAGCCAAAGAAGAAGAAAAAGCAAC
CGAAGCTCTCTCTGCCTCCTCACCGTCACCACAAAAACAAAAGGAAAGAA
AGAAAGAGAGTGAGTGAGAGAAAGAGAGATCAAAAGGAGAGAGAGCTGAA
ACAACACAACAGATAACAATGGCTTCGCTGACGATGCCGCGCCCTTCACA
ATCCACGTCAGCTTCTTGCTCTTCGCCTATCCCCAGTCGCTGTTCTTTCG
GTGACCAAAACCCAACTTTTTCATTCAGTTTCAGGGACTCTCGCTCTCGG
GTTCACGTCTGTAATGCCGCCGCCGTTAGATGTGACATGGCTGAGGCATT
GAATTTTCCAAATGGGAAGCCTAATATTCCAGTTCTAAACGAACGGACGC
TGCCCAAATTTTTGGAAACGGCGCGTATGGAGAAAACTGTCAACAGAACT
ACAAATAACAGGATCAAATTGTTCTCTGGCACCGCCAATCCTGCTCTTTC
CCAGGAAATTGCTTGCTACATGGGCGTGGAACTGGGAAAGATCAACATAA
AGCGATTTGCTGATGGTGAAATTTATGTTCAGCTGCAAGAGAGTGTTAGA
GGATGTGATGTTTATTTGGTGCAGCCCACCTGTCCTCCGGCATGAAAATC
TCATGGAGCTTTTGATAATGATAGATGCGTGT
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