FC930915
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930915 vs. ExPASy Swiss-Prot
Match: MDH_MORS2 (Malate dehydrogenase OS=Moritella sp. (strain 2D2) GN=mdh PE=1 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 1.591e-27 Identity = 70/117 (59.83%), Postives = 82/117 (70.09%), Query Frame = 1 Query: 178 KVAVLGAAGGIGQPLALLMKLN-PLVSRLALYDIAN-TPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMI 522 KVAVLGAAGGIGQ LALL+K P S L+LYDIA TPGVA D+ HI T + G+ G D AL +DVV+I AGV RKPGM R DLFNINAGI+K+L S A+ CP A + +I Sbjct: 2 KVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPVTPGVAVDLSHIPTDVTITGFSGIDPTA-ALVGADVVLISAGVARKPGMDRSDLFNINAGIIKNLASKCAEVCPTACIGII 117
BLAST of FC930915 vs. ExPASy Swiss-Prot
Match: MDH_HAEDU (Malate dehydrogenase OS=Haemophilus ducreyi GN=mdh PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 1.591e-27 Identity = 68/123 (55.28%), Postives = 84/123 (68.29%), Query Frame = 1 Query: 178 KVAVLGAAGGIGQPLALLMKLN-PLVSRLALYDIAN-TPGVAADVGHINTRSEVAGYMGNDQL------GQALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMI 522 KV VLGAAGGIGQ L+LL+KL P + LALYDI+ TPG+A D+ HI T GY G D AL+D+++VII AG+ RKPGMTR DLFNINAGIVKDL +A+ CP A + ++ Sbjct: 2 KVTVLGAAGGIGQTLSLLLKLRLPAGADLALYDISPVTPGIAVDISHIPTSVNAIGYAGEDPSVALKDPSVALKDTNLVIITAGIARKPGMTRADLFNINAGIVKDLVEKVAEVCPMACIGIV 124
BLAST of FC930915 vs. ExPASy Swiss-Prot
Match: MDH_PECCP (Malate dehydrogenase OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) GN=mdh PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 2.078e-27 Identity = 69/117 (58.97%), Postives = 82/117 (70.09%), Query Frame = 1 Query: 178 KVAVLGAAGGIGQPLALLMKLN-PLVSRLALYDIAN-TPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMI 522 KVAVLGAAGGIGQ LALL+K P S L+LYDIA TPGVA D+ HI T ++ GY G D AL +D+V+I AGV RKPGM R DLFN+NAGIV++L IA CP A + +I Sbjct: 2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGYSGEDAK-PALAGADIVLISAGVARKPGMDRSDLFNVNAGIVRNLVEQIAVTCPKACIGII 117
BLAST of FC930915 vs. ExPASy Swiss-Prot
Match: MDH_AERHH (Malate dehydrogenase OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) GN=mdh PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 2.078e-27 Identity = 71/117 (60.68%), Postives = 82/117 (70.09%), Query Frame = 1 Query: 178 KVAVLGAAGGIGQPLALLMKLN-PLVSRLALYDIAN-TPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMI 522 KVAVLGAAGGIGQ LALL+K P S L+LYDIA TPGVA D+ HI T +V G+ G D AL +DVV+I AGV RKPGM R DLFNINAGIVK+L A CP A++ +I Sbjct: 2 KVAVLGAAGGIGQALALLLKNRLPAGSELSLYDIAPVTPGVAVDLSHIPTDVKVKGFCGEDP-SPALVGADVVLISAGVARKPGMDRSDLFNINAGIVKNLVEKCAASCPKALIGII 117
BLAST of FC930915 vs. ExPASy Swiss-Prot
Match: MDH_SERP5 (Malate dehydrogenase OS=Serratia proteamaculans (strain 568) GN=mdh PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 2.714e-27 Identity = 68/117 (58.12%), Postives = 82/117 (70.09%), Query Frame = 1 Query: 178 KVAVLGAAGGIGQPLALLMKLN-PLVSRLALYDIAN-TPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMI 522 KVAVLGAAGGIGQ LALL+K P S L+LYDIA TPGVA D+ HI T ++ G+ G D AL +DVV+I AGV RKPGM R DLFN+NAGIV++L +A CP A + +I Sbjct: 2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSGEDAT-PALHGADVVLISAGVARKPGMDRSDLFNVNAGIVRNLIQQVATTCPKACIGII 117
BLAST of FC930915 vs. ExPASy Swiss-Prot
Match: MDH_ERWCT (Malate dehydrogenase OS=Erwinia carotovora subsp. atroseptica GN=mdh PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 2.714e-27 Identity = 69/117 (58.97%), Postives = 82/117 (70.09%), Query Frame = 1 Query: 178 KVAVLGAAGGIGQPLALLMKLN-PLVSRLALYDIAN-TPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMI 522 KVAVLGAAGGIGQ LALL+K P S L+LYDIA TPGVA D+ HI T ++ GY G D AL +D+V+I AGV RKPGM R DLFN+NAGIV++L IA CP A + +I Sbjct: 2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGYSGEDAK-PALAGADIVLISAGVARKPGMDRSDLFNVNAGIVRNLVEQIAITCPKACIGII 117
BLAST of FC930915 vs. ExPASy Swiss-Prot
Match: MDH_EDWI9 (Malate dehydrogenase OS=Edwardsiella ictaluri (strain 93-146) GN=mdh PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 7.898e-27 Identity = 67/117 (57.26%), Postives = 83/117 (70.94%), Query Frame = 1 Query: 178 KVAVLGAAGGIGQPLALLMKLN-PLVSRLALYDIAN-TPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMI 522 KVAVLGAAGGIGQ LALL+K P S L+LYDIA TPGVA D+ HI T +V G+ G D AL +D+V+I AGV RKPGM R DLFN+NAGI+++L +A+ PNA + +I Sbjct: 2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKVCGFGGEDA-SPALVGADIVLISAGVARKPGMDRSDLFNVNAGIIRNLIGQVARTSPNACIGII 117
BLAST of FC930915 vs. ExPASy Swiss-Prot
Match: MDH_AERS4 (Malate dehydrogenase OS=Aeromonas salmonicida (strain A449) GN=mdh PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 7.898e-27 Identity = 70/117 (59.83%), Postives = 81/117 (69.23%), Query Frame = 1 Query: 178 KVAVLGAAGGIGQPLALLMKLN-PLVSRLALYDIAN-TPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMI 522 KVAVLGAAGGIGQ LALL+K P S L+LYDIA TPGVA D+ HI T +V G+ G D AL +DVV+I AGV RKPGM R DLFNIN GIVK+L A CP A++ +I Sbjct: 2 KVAVLGAAGGIGQALALLLKNRLPAGSELSLYDIAPVTPGVAVDLSHIPTDVKVKGFCGEDP-SPALVGADVVLISAGVARKPGMDRSDLFNINPGIVKNLVEKCAASCPKALIGII 117
BLAST of FC930915 vs. ExPASy Swiss-Prot
Match: MDH_VIBMI (Malate dehydrogenase (Fragment) OS=Vibrio mimicus GN=mdh PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 1.945e-25 Identity = 68/111 (61.26%), Postives = 76/111 (68.47%), Query Frame = 1 Query: 196 AAGGIGQPLALLMKLN-PLVSRLALYDIAN-TPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMI 522 AAGGIGQ LALL+K P S LALYDIA TPGVAAD+ HI T + GY G D ALE +DVV++ AGV RKPGM R DLFN+NAGIVK L IA CP A V +I Sbjct: 1 AAGGIGQALALLLKNRLPAGSDLALYDIAPVTPGVAADLSHIPTPVTIKGYAGEDPT-PALEGADVVLVSAGVARKPGMDRADLFNVNAGIVKALAETIAVVCPKACVGII 110
BLAST of FC930915 vs. ExPASy Swiss-Prot
Match: MDH_KLEPN (Malate dehydrogenase (Fragments) OS=Klebsiella pneumoniae GN=mdh PE=1 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 3.669e-24 Identity = 67/116 (57.76%), Postives = 79/116 (68.10%), Query Frame = 1 Query: 178 KVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN-TPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMI 522 KVAVL AAGGI Q LALL+K + LYDIA TPGVA D+ HI T ++ G+ G D ALE +DVV+I AGV RKPGM R DLFN+NAGIVK+L IAK CP A + +I Sbjct: 2 KVAVLXAAGGI-QALALLLKTS-------LYDIAPVTPGVAVDLSHIPTDVKIKGFSGEDAT-PALEGADVVLISAGVARKPGMDRSDLFNVNAGIVKNLVQQIAKTCPQACIGII 108 The following BLAST results are available for this feature:
BLAST of FC930915 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 231
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930915 ID=FC930915; Name=FC930915; organism=Citrus clementina; type=EST; length=524bpback to top |