FC930915
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930915 vs. ExPASy Swiss-Prot
Match: MDH_SALMU (Malate dehydrogenase (Fragment) OS=Salmonella muenchen GN=mdh PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 1.394e-23 Identity = 63/107 (58.88%), Postives = 75/107 (70.09%), Query Frame = 1 Query: 208 IGQPLALLMKLN-PLVSRLALYDIAN-TPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMI 522 IGQ LALL+K P S L+LYDIA TPGVA D+ HI T ++ G+ G D + ALE +DVV+I AGV RKPGM R DLFN+NAGIVK+L IAK CP A V +I Sbjct: 1 IGQALALLLKNQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSGED-VTPALEGADVVLISAGVARKPGMDRSDLFNVNAGIVKNLVQQIAKTCPKACVGII 106
BLAST of FC930915 vs. ExPASy Swiss-Prot
Match: MDHC_YEAST (Malate dehydrogenase, cytoplasmic OS=Saccharomyces cerevisiae GN=MDH2 PE=1 SV=2) HSP 1 Score: 102.834 bits (255), Expect = 9.991e-22 Identity = 58/120 (48.33%), Postives = 77/120 (64.17%), Query Frame = 1 Query: 178 KVAVLGAAGGIGQPLALLMKL---------NPLVSR--LALYDIANTP--GVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYC 498 K+A+LGAAGGIGQ L+LL+K N V+ LALYD+ GV AD+ HI+T V+ + + L ++ +V+IPAGVPRKPGMTRDDLFN+NAGI+ L +IA+ C Sbjct: 15 KIAILGAAGGIGQSLSLLLKAQLQYQLKESNRSVTHIHLALYDVNQEAINGVTADLSHIDTPISVSSHSPAGGIENCLHNASIVVIPAGVPRKPGMTRDDLFNVNAGIISQLGDSIAECC 134
BLAST of FC930915 vs. ExPASy Swiss-Prot
Match: MDH_KLEVA (Malate dehydrogenase (Fragment) OS=Klebsiella variicola GN=mdh PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 1.595e-19 Identity = 51/88 (57.95%), Postives = 62/88 (70.45%), Query Frame = 1 Query: 262 ALYDIAN-TPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMI 522 +LYDIA TPGVA D+ HI T ++ G+ G D ALE +DVV+I AGV RKPGM R DLFN+NAGIVK+L IAK CP A + +I Sbjct: 1 SLYDIAPVTPGVAVDLSHIPTDVKIKGFSGEDAT-PALEGADVVLISAGVARKPGMDRSDLFNVNAGIVKNLVQQIAKTCPQACIGVI 87
BLAST of FC930915 vs. ExPASy Swiss-Prot
Match: MDH_KLEOX (Malate dehydrogenase (Fragment) OS=Klebsiella oxytoca GN=mdh PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 3.008e-18 Identity = 47/80 (58.75%), Postives = 56/80 (70.00%), Query Frame = 1 Query: 283 TPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMI 522 TPGVA D+ HI T ++ G+ G D ALE +DVV+I AGV RKPGM R DLFN+NAGIVK+L IAK CP A V +I Sbjct: 4 TPGVAVDLSHIPTDVKIKGFSGEDAT-PALEGADVVLISAGVARKPGMDRSDLFNVNAGIVKNLVQQIAKTCPQACVGII 82
BLAST of FC930915 vs. ExPASy Swiss-Prot
Match: MDH_KLEPR (Malate dehydrogenase (Fragment) OS=Klebsiella pneumoniae subsp. rhinoscleromatis GN=mdh PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 3.929e-18 Identity = 50/88 (56.82%), Postives = 61/88 (69.32%), Query Frame = 1 Query: 262 ALYDIAN-TPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMI 522 +LYDIA TPGVA D+ HI T ++ G+ G D ALE +DVV+I AGV RKPGM R DLFN+NAGIVK+L IAK P A + +I Sbjct: 1 SLYDIAPVTPGVAVDLSHIPTDVKIKGFSGEDAT-PALEGADVVLISAGVARKPGMDRSDLFNVNAGIVKNLVQQIAKTRPQACIGII 87
BLAST of FC930915 vs. ExPASy Swiss-Prot
Match: MDH_KLETE (Malate dehydrogenase (Fragment) OS=Klebsiella terrigena GN=mdh PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 5.673e-17 Identity = 45/80 (56.25%), Postives = 55/80 (68.75%), Query Frame = 1 Query: 283 TPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMI 522 TPGVA D+ HI T ++ G+ G D ALE +DVV+I AGV RKPGM R DLFN+NAGIVK+L IAK P A + +I Sbjct: 6 TPGVAVDLSHIPTDVKIKGFSGEDAT-PALEGADVVLISAGVARKPGMDRSDLFNVNAGIVKNLVQQIAKTSPQACIGII 84
BLAST of FC930915 vs. ExPASy Swiss-Prot
Match: MDH_ANAMM (Malate dehydrogenase OS=Anaplasma marginale (strain St. Maries) GN=mdh PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 1.545e-14 Identity = 46/117 (39.32%), Postives = 68/117 (58.12%), Query Frame = 1 Query: 178 KVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN--TPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMI 522 KV+++GA G IG LA ++ + +V L L D+A T G DVG Y+ A+E SD V++ AG+PRK GM+R+DL N NA +V+++ IAKY P A+V ++ Sbjct: 8 KVSLVGA-GNIGGALAHMLGASQVVKELVLVDVAGGMTEGKVLDVGQALALLGSDVYITGGSDYAAIEHSDAVVVTAGIPRKEGMSREDLLNTNAAVVRNIAENIAKYSPGALVIVV 123
BLAST of FC930915 vs. ExPASy Swiss-Prot
Match: MDH_ANAMF (Malate dehydrogenase OS=Anaplasma marginale (strain Florida) GN=mdh PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 1.545e-14 Identity = 46/117 (39.32%), Postives = 68/117 (58.12%), Query Frame = 1 Query: 178 KVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN--TPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMI 522 KV+++GA G IG LA ++ + +V L L D+A T G DVG Y+ A+E SD V++ AG+PRK GM+R+DL N NA +V+++ IAKY P A+V ++ Sbjct: 8 KVSLVGA-GNIGGALAHMLGASQVVKELVLVDVAGGMTEGKVLDVGQALALLGSDVYITGGSDYAAIEHSDAVVVTAGIPRKEGMSREDLLNTNAAVVRNIAENIAKYSPGALVIVV 123
BLAST of FC930915 vs. ExPASy Swiss-Prot
Match: MDH_RHORT (Malate dehydrogenase OS=Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) GN=mdh PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 3.442e-14 Identity = 53/116 (45.69%), Postives = 71/116 (61.21%), Query Frame = 1 Query: 175 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN-TP-GVAADVGHINTRSEV-AGYMGNDQLGQALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIV 513 +K+A++GA G IG LA L+ L L + L+DIA TP G A D+ V A Y G++ A++D+DVVI+ AGVPRKPGM+RDDL INA ++ + I CPNA V Sbjct: 4 KKIALVGA-GNIGGTLAHLIGLKEL-GDVVLFDIAEGTPQGKALDIAESTPIEGVDASYSGSNDYA-AIKDADVVIVTAGVPRKPGMSRDDLIGINAKVMSAVGQGIRANCPNAFV 116
BLAST of FC930915 vs. ExPASy Swiss-Prot
Match: MDH_PELUB (Malate dehydrogenase OS=Pelagibacter ubique GN=mdh PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 5.871e-14 Identity = 49/119 (41.18%), Postives = 69/119 (57.98%), Query Frame = 1 Query: 175 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN--TPGVAADVGHINTRSEVAGY----MGNDQLGQALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIV 513 +K++++GA G IG LA L+ + + L+D+A+ G A D+ S V G+ G D + ++DSDV+II AGVPRKPGM+RDDL IN I+K + I K PNA V Sbjct: 2 KKISLIGA-GQIGGTLAHLIGTKEVADEVVLFDVASGIAKGKALDIAQ---SSSVDGFNVKFSGTDNY-EDIKDSDVIIITAGVPRKPGMSRDDLLGINLKIIKQVAEGIKKNAPNAFV 115 The following BLAST results are available for this feature:
BLAST of FC930915 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 231
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930915 ID=FC930915; Name=FC930915; organism=Citrus clementina; type=EST; length=524bpback to top |