FC930915
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930915 vs. ExPASy Swiss-Prot
Match: MDH_RICB8 (Malate dehydrogenase OS=Rickettsia bellii (strain OSU 85-389) GN=mdh PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.001e-13 Identity = 49/119 (41.18%), Postives = 72/119 (60.50%), Query Frame = 1 Query: 178 KVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN--TPGVAADVGHINTR--SEVAGYMGNDQLGQALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMI 522 K++++G+ G IG LA L+ L L + L+D+A G A D+ NT S++ ND + +E SD +II AG+PRKPGM+RDDL ++N GI+K + + KY PNA V +I Sbjct: 6 KISLIGS-GNIGGMLAHLISLKNL-GDIVLFDVAEGIPQGKALDIMQANTLAGSDIKIKGTNDY--KDIEGSDAIIITAGLPRKPGMSRDDLISVNTGIMKSVAENVKKYAPNAFVIVI 120
BLAST of FC930915 vs. ExPASy Swiss-Prot
Match: MDH_RICBR (Malate dehydrogenase OS=Rickettsia bellii (strain RML369-C) GN=mdh PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 1.308e-13 Identity = 49/119 (41.18%), Postives = 71/119 (59.66%), Query Frame = 1 Query: 178 KVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN--TPGVAADVGHINTR--SEVAGYMGNDQLGQALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMI 522 K+ ++G+ G IG LA L+ L L + L+D+A G A D+ NT S++ ND + +E SD +II AG+PRKPGM+RDDL ++N GI+K + + KY PNA V +I Sbjct: 6 KILLIGS-GNIGGTLAHLISLKNL-GDIVLFDVAEGIPQGKALDIMQANTLAGSDIKIKGTNDY--KDIEGSDAIIITAGLPRKPGMSRDDLISVNTGIMKSVAENVKKYAPNAFVIVI 120
BLAST of FC930915 vs. ExPASy Swiss-Prot
Match: MDH_PARL1 (Malate dehydrogenase OS=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) GN=mdh PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 4.970e-13 Identity = 52/120 (43.33%), Postives = 68/120 (56.67%), Query Frame = 1 Query: 175 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN--TPGVAADVGHINTRSEVAGYM-----GNDQLGQALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIV 513 +K+A++G G IG LALL L L + ++DIA G A D+ V GY ND G ++ +DVVI+ AGVPRKPGM+RDDL IN ++K + IAKY PNA V Sbjct: 4 KKIALIGG-GQIGGTLALLAGLKEL-GDVVIFDIAEGLPQGKALDLAQTGP---VEGYNTALSGANDYKG--IKGADVVIVTAGVPRKPGMSRDDLLGINLKVMKQVGEGIAKYAPNAFV 116
BLAST of FC930915 vs. ExPASy Swiss-Prot
Match: MDH_EHRRW (Malate dehydrogenase OS=Ehrlichia ruminantium (strain Welgevonden) GN=mdh PE=3 SV=2) HSP 1 Score: 73.559 bits (179), Expect = 6.491e-13 Identity = 42/121 (34.71%), Postives = 71/121 (58.68%), Query Frame = 1 Query: 166 VPDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN--TPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMI 522 + +K+A++G+ G IG +A L++L L + L DI + G A D+ + + G + +E++D +I+ AG+ RKPGM+RDDL + N I+K++ + IAKY PNA V ++ Sbjct: 2 IQSKKIALIGS-GNIGGMIAYLIRLKNL-GDVVLLDINDGMAKGKALDIAESSPIGKYNGEIFGTNNYADIENADAIIVTAGITRKPGMSRDDLISTNVNIIKEIATNIAKYAPNAFVIVV 120
BLAST of FC930915 vs. ExPASy Swiss-Prot
Match: MDH_EHRRG (Malate dehydrogenase OS=Ehrlichia ruminantium (strain Gardel) GN=mdh PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 6.491e-13 Identity = 42/121 (34.71%), Postives = 71/121 (58.68%), Query Frame = 1 Query: 166 VPDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN--TPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMI 522 + +K+A++G+ G IG +A L++L L + L DI + G A D+ + + G + +E++D +I+ AG+ RKPGM+RDDL + N I+K++ + IAKY PNA V ++ Sbjct: 6 IQSKKIALIGS-GNIGGMIAYLIRLKNL-GDVVLLDINDGMAKGKALDIAESSPIGKYNGEIFGTNNYADIENADAIIVTAGITRKPGMSRDDLISTNVNIIKEIATNIAKYAPNAFVIVV 124
BLAST of FC930915 vs. ExPASy Swiss-Prot
Match: MDH_RICAH (Malate dehydrogenase OS=Rickettsia akari (strain Hartford) GN=mdh PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 8.477e-13 Identity = 48/119 (40.34%), Postives = 73/119 (61.34%), Query Frame = 1 Query: 178 KVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN--TPGVAADVGHINT--RSEVAGYMGNDQLGQALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMI 522 K++++G+ G IG LA L+ L L + L+D+A G A D+ +T S++ ND + +E SD +II AG+PRKPGM+RDDL +IN GI+K++ + KY P+A V +I Sbjct: 6 KISLIGS-GNIGGTLAHLISLREL-GDIVLFDVAEGVPQGKALDLMQASTIAGSDIKITGTNDY--KDIEGSDAIIITAGLPRKPGMSRDDLISINTGIMKNVAENVKKYAPDAFVIVI 120
BLAST of FC930915 vs. ExPASy Swiss-Prot
Match: MDH_FLAJ1 (Malate dehydrogenase OS=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) GN=mdh PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.446e-12 Identity = 47/121 (38.84%), Postives = 69/121 (57.02%), Query Frame = 1 Query: 178 KVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN--TPGVAADVGHINTRS----EVAGYMGNDQLGQALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMI 522 KV ++GA G +G A ++ + S + L DI G A D+ T + +V+G + ND A SDVV+I +G+PRKPGMTR++L INAGIVK + + KY PN I+ ++ Sbjct: 2 KVTIVGA-GNVGATCADVISYRGIASEVVLLDIKEGFAEGKALDITQCATNTGFNTKVSG-VTNDYSKTA--GSDVVVITSGIPRKPGMTREELIGINAGIVKTVAENVLKYSPNTIIVVV 118
BLAST of FC930915 vs. ExPASy Swiss-Prot
Match: MDH_CYTH3 (Malate dehydrogenase OS=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) GN=mdh PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.446e-12 Identity = 47/123 (38.21%), Postives = 71/123 (57.72%), Query Frame = 1 Query: 178 KVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN--TPGVAADVGHINTRSEVAGY------MGNDQLGQALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMI 522 KV V+GA G +G A ++ +V+ + L DI G A D+ ++ + Y + ND A +SDVV+I +G+PRKPGMTRDDL + NAGIV+ + ++ KY PNAI+ ++ Sbjct: 2 KVTVVGA-GNVGATCADVLAYREIVNEVILLDIKEGVAEGKALDIWQ---KAPITQYDTKTTGVTNDYSKTA--NSDVVVITSGLPRKPGMTRDDLISTNAGIVRAVTESVVKYSPNAIIIVV 118
BLAST of FC930915 vs. ExPASy Swiss-Prot
Match: MDH_PARD8 (Malate dehydrogenase OS=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) GN=mdh PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.889e-12 Identity = 42/119 (35.29%), Postives = 68/119 (57.14%), Query Frame = 1 Query: 178 KVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGY----MGNDQLGQALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMI 522 KV V+GA G +G A ++ N + + + D+ + + T +++ G+ +G + +SDVV+I +G+PRKPGMTR++L +NAGIVK + I KY PNAI+ +I Sbjct: 3 KVTVVGA-GNVGATCANVLAFNEVADEVVMLDVKEGVSEGKAMDMMQT-AQLLGFDTKVVGCTNDYEKTANSDVVVITSGIPRKPGMTREELIGVNAGIVKSVAQNILKYSPNAILVVI 119
BLAST of FC930915 vs. ExPASy Swiss-Prot
Match: MDH_BACTN (Malate dehydrogenase OS=Bacteroides thetaiotaomicron GN=mdh PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 2.467e-12 Identity = 47/121 (38.84%), Postives = 69/121 (57.02%), Query Frame = 1 Query: 178 KVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN--TPGVAADVGH----INTRSEVAGYMGNDQLGQALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMI 522 KV V+GA G +G A ++ N + + + D+ + G A D+ + + V G ND A +SDVV+I +G+PRKPGMTR++L +NAGIVK + I KY PNAI+ +I Sbjct: 3 KVTVVGA-GNVGATCANVLAFNEVADEVVMLDVKEGVSEGKAMDMMQTAQLLGFDTTVVGCT-NDYAQTA--NSDVVVITSGIPRKPGMTREELIGVNAGIVKSVAENILKYSPNAILVVI 119 The following BLAST results are available for this feature:
BLAST of FC930915 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 231
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930915 ID=FC930915; Name=FC930915; organism=Citrus clementina; type=EST; length=524bpback to top |