FC930915
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930915 vs. ExPASy Swiss-Prot
Match: MDH_BRUSU (Malate dehydrogenase OS=Brucella suis GN=mdh PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 7.935e-11 Identity = 51/119 (42.86%), Postives = 68/119 (57.14%), Query Frame = 1 Query: 178 KVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN-TP-GVAADVGHINTRSEVAGYMG-----NDQLGQALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIV 513 K+A++G+ G IG LA L L L + L+DIA TP G D+ S V G+ ND A+E +DVVI+ AGVPRKPGM+RDDL IN +++ + + I KY P A V Sbjct: 5 KIALIGS-GMIGGTLAHLAGLKEL-GDVVLFDIAEGTPQGKGLDIAE---SSPVDGFDAKFTGANDYA--AIEGADVVIVTAGVPRKPGMSRDDLLGINLKVMEQVGAGIKKYAPEAFV 116
BLAST of FC930915 vs. ExPASy Swiss-Prot
Match: MDH_BRUO2 (Malate dehydrogenase OS=Brucella ovis (strain ATCC 25840 / 63/290 / NCTC 10512) GN=mdh PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 7.935e-11 Identity = 51/119 (42.86%), Postives = 68/119 (57.14%), Query Frame = 1 Query: 178 KVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN-TP-GVAADVGHINTRSEVAGYMG-----NDQLGQALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIV 513 K+A++G+ G IG LA L L L + L+DIA TP G D+ S V G+ ND A+E +DVVI+ AGVPRKPGM+RDDL IN +++ + + I KY P A V Sbjct: 5 KIALIGS-GMIGGTLAHLAGLKEL-GDVVLFDIAEGTPQGKGLDIAE---SSPVDGFDAKFTGANDYA--AIEGADVVIVTAGVPRKPGMSRDDLLGINLKVMEQVGAGIKKYAPEAFV 116
BLAST of FC930915 vs. ExPASy Swiss-Prot
Match: MDH_BRUME (Malate dehydrogenase OS=Brucella melitensis GN=mdh PE=3 SV=2) HSP 1 Score: 66.6254 bits (161), Expect = 7.935e-11 Identity = 51/119 (42.86%), Postives = 68/119 (57.14%), Query Frame = 1 Query: 178 KVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN-TP-GVAADVGHINTRSEVAGYMG-----NDQLGQALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIV 513 K+A++G+ G IG LA L L L + L+DIA TP G D+ S V G+ ND A+E +DVVI+ AGVPRKPGM+RDDL IN +++ + + I KY P A V Sbjct: 5 KIALIGS-GMIGGTLAHLAGLKEL-GDVVLFDIAEGTPQGKGLDIAE---SSPVDGFDAKFTGANDYA--AIEGADVVIVTAGVPRKPGMSRDDLLGINLKVMEQVGAGIKKYAPEAFV 116
BLAST of FC930915 vs. ExPASy Swiss-Prot
Match: MDH_BRUMB (Malate dehydrogenase OS=Brucella melitensis biotype 2 (strain ATCC 23457) GN=mdh PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 7.935e-11 Identity = 51/119 (42.86%), Postives = 68/119 (57.14%), Query Frame = 1 Query: 178 KVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN-TP-GVAADVGHINTRSEVAGYMG-----NDQLGQALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIV 513 K+A++G+ G IG LA L L L + L+DIA TP G D+ S V G+ ND A+E +DVVI+ AGVPRKPGM+RDDL IN +++ + + I KY P A V Sbjct: 5 KIALIGS-GMIGGTLAHLAGLKEL-GDVVLFDIAEGTPQGKGLDIAE---SSPVDGFDAKFTGANDYA--AIEGADVVIVTAGVPRKPGMSRDDLLGINLKVMEQVGAGIKKYAPEAFV 116
BLAST of FC930915 vs. ExPASy Swiss-Prot
Match: MDH_BRUC2 (Malate dehydrogenase OS=Brucella canis (strain ATCC 23365 / NCTC 10854) GN=mdh PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 7.935e-11 Identity = 51/119 (42.86%), Postives = 68/119 (57.14%), Query Frame = 1 Query: 178 KVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN-TP-GVAADVGHINTRSEVAGYMG-----NDQLGQALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIV 513 K+A++G+ G IG LA L L L + L+DIA TP G D+ S V G+ ND A+E +DVVI+ AGVPRKPGM+RDDL IN +++ + + I KY P A V Sbjct: 5 KIALIGS-GMIGGTLAHLAGLKEL-GDVVLFDIAEGTPQGKGLDIAE---SSPVDGFDAKFTGANDYA--AIEGADVVIVTAGVPRKPGMSRDDLLGINLKVMEQVGAGIKKYAPEAFV 116
BLAST of FC930915 vs. ExPASy Swiss-Prot
Match: MDH_BRUAB (Malate dehydrogenase OS=Brucella abortus GN=mdh PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 7.935e-11 Identity = 51/119 (42.86%), Postives = 68/119 (57.14%), Query Frame = 1 Query: 178 KVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN-TP-GVAADVGHINTRSEVAGYMG-----NDQLGQALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIV 513 K+A++G+ G IG LA L L L + L+DIA TP G D+ S V G+ ND A+E +DVVI+ AGVPRKPGM+RDDL IN +++ + + I KY P A V Sbjct: 5 KIALIGS-GMIGGTLAHLAGLKEL-GDVVLFDIAEGTPQGKGLDIAE---SSPVDGFDAKFTGANDYA--AIEGADVVIVTAGVPRKPGMSRDDLLGINLKVMEQVGAGIKKYAPEAFV 116
BLAST of FC930915 vs. ExPASy Swiss-Prot
Match: MDH_BRUA2 (Malate dehydrogenase OS=Brucella abortus (strain 2308) GN=mdh PE=1 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 7.935e-11 Identity = 51/119 (42.86%), Postives = 68/119 (57.14%), Query Frame = 1 Query: 178 KVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN-TP-GVAADVGHINTRSEVAGYMG-----NDQLGQALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIV 513 K+A++G+ G IG LA L L L + L+DIA TP G D+ S V G+ ND A+E +DVVI+ AGVPRKPGM+RDDL IN +++ + + I KY P A V Sbjct: 5 KIALIGS-GMIGGTLAHLAGLKEL-GDVVLFDIAEGTPQGKGLDIAE---SSPVDGFDAKFTGANDYA--AIEGADVVIVTAGVPRKPGMSRDDLLGINLKVMEQVGAGIKKYAPEAFV 116
BLAST of FC930915 vs. ExPASy Swiss-Prot
Match: MDH_BRUA1 (Malate dehydrogenase OS=Brucella abortus (strain S19) GN=mdh PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 7.935e-11 Identity = 51/119 (42.86%), Postives = 68/119 (57.14%), Query Frame = 1 Query: 178 KVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN-TP-GVAADVGHINTRSEVAGYMG-----NDQLGQALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIV 513 K+A++G+ G IG LA L L L + L+DIA TP G D+ S V G+ ND A+E +DVVI+ AGVPRKPGM+RDDL IN +++ + + I KY P A V Sbjct: 5 KIALIGS-GMIGGTLAHLAGLKEL-GDVVLFDIAEGTPQGKGLDIAE---SSPVDGFDAKFTGANDYA--AIEGADVVIVTAGVPRKPGMSRDDLLGINLKVMEQVGAGIKKYAPEAFV 116
BLAST of FC930915 vs. ExPASy Swiss-Prot
Match: MDH_BRASO (Malate dehydrogenase OS=Bradyrhizobium sp. (strain ORS278) GN=mdh PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 7.935e-11 Identity = 42/114 (36.84%), Postives = 66/114 (57.89%), Query Frame = 1 Query: 178 KVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN--TPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIV 513 K+A++G+ G IG LA L+ L L + ++DIA G A D+ + + +AL+++ V I+ AGVPRKPGM+RDDL +IN +++ + + I KY P+A V Sbjct: 5 KIALIGS-GQIGGTLAHLVGLKEL-GDVVMFDIAEGVPQGKALDIAQSSPVDGFDAHYTGANSYEALDNAKVCIVTAGVPRKPGMSRDDLLSINLKVMEQVGAGIKKYAPDAFV 116
BLAST of FC930915 vs. ExPASy Swiss-Prot
Match: MDH_BRAJA (Malate dehydrogenase OS=Bradyrhizobium japonicum GN=mdh PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 7.935e-11 Identity = 42/114 (36.84%), Postives = 66/114 (57.89%), Query Frame = 1 Query: 178 KVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN--TPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIV 513 K+A++G+ G IG LA L+ L L + ++DIA G A D+ + + +AL+++ V I+ AGVPRKPGM+RDDL +IN +++ + + I KY P+A V Sbjct: 5 KIALIGS-GQIGGTLAHLIGLKEL-GDVVMFDIAEGVPQGKALDIAQSSPVDGFDAHYTGANSYEALDNAKVCIVTAGVPRKPGMSRDDLLSINLKVMEQVGAGIKKYAPDAFV 116 The following BLAST results are available for this feature:
BLAST of FC930915 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 231
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930915 ID=FC930915; Name=FC930915; organism=Citrus clementina; type=EST; length=524bpback to top |