FC930919

Overview
NameFC930919
Unique NameFC930919
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length683
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930919 vs. ExPASy Swiss-Prot
Match: C81E1_GLYEC (Isoflavone 2'-hydroxylase OS=Glycyrrhiza echinata GN=CYP81E1 PE=1 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 6.564e-13
Identity = 42/121 (34.71%), Postives = 67/121 (55.37%), Query Frame = 3
Query:  189 IIGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSAKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDEEVNRFMSRV 551
            IIG+LH  + +R  H++F  L+EK G +F +  G    VVVSS    +Q    +D V A+RP  LS K++      +  +  G +WR  R+I   ++LS  R+NSF  +  +E  R ++R+
Sbjct:   41 IIGNLH--HLKRPLHRTFKGLSEKYGHVFSLWFGSRLVVVVSSASEFQQCFTKNDVVLANRPRFLSGKYIFYNYTTLGSTSYGEHWRNLRRITALDVLSNHRINSFSGIRRDETQRLITRL 159          
BLAST of FC930919 vs. ExPASy Swiss-Prot
Match: C75A2_SOLME (Flavonoid 3',5'-hydroxylase OS=Solanum melongena GN=CYP75A2 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.120e-12
Identity = 37/105 (35.24%), Postives = 58/105 (55.24%), Query Frame = 3
Query:  228 PHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSAKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDEEVNRFM 542
            PH + AK+A+K GPI Y+++G    VV S+   AK  LKT D  F++RP    A H++    D+ F+P GP W+  RK+    +L  K + ++  V   E+   +
Sbjct:   56 PHVALAKMAKKYGPIMYLKVGTCGMVVASTPNAAKAFLKTLDINFSNRPPNAGATHMAYNAQDMVFAPYGPRWKLLRKLSNLHMLGGKALENWANVRANELGHML 160          
BLAST of FC930919 vs. ExPASy Swiss-Prot
Match: C80B2_ESCCA ((S)-N-methylcoclaurine 3'-hydroxylase isozyme 2 OS=Eschscholzia californica GN=CYP80B2 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.258e-12
Identity = 40/142 (28.17%), Postives = 69/142 (48.59%), Query Frame = 3
Query:  225 KPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSAKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDEEVNRFMSRVKARCGLETDMSDLIFAFCTDFFCLAAFGVRFME 650
            KPH  FA+LA+  G IF +++G    VV S+   A ++LKTHD++ ++R    S +        + +S     W+  RK+C TEL + K + S   V +++    +  +  + G E  + ++IF    + F    F     E
Sbjct:   48 KPHAQFAELAQTYGDIFTLKMGTETVVVASTSSAASEILKTHDRILSARYVFQSFRVKGHVENSIVWSDCTETWKNLRKVCRTELFTQKMIESQAHVREKKCEEMVEYLMKKQGEEVKIVEVIFGTLVNIFGNLIFSQNIFE 189          
BLAST of FC930919 vs. ExPASy Swiss-Prot
Match: C80B1_ESCCA ((S)-N-methylcoclaurine 3'-hydroxylase isozyme 1 (Fragment) OS=Eschscholzia californica GN=CYP80B1 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.258e-12
Identity = 40/142 (28.17%), Postives = 69/142 (48.59%), Query Frame = 3
Query:  225 KPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSAKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDEEVNRFMSRVKARCGLETDMSDLIFAFCTDFFCLAAFGVRFME 650
            KPH  FA+LA+  G IF +++G    VV S+   A ++LKTHD++ ++R    S +        + +S     W+  RK+C TEL + K + S   V +++    +  +  + G E  + ++IF    + F    F     E
Sbjct:   47 KPHAQFAELAQTYGDIFTLKMGTETVVVASTSSAASEILKTHDRILSARYVFQSFRVKGHVENSIVWSDCTETWKNLRKVCRTELFTQKMIESQAHVREKKCEEMVEYLMKKQGEEVKIVEVIFGTLVNIFGNLIFSQNIFE 188          
BLAST of FC930919 vs. ExPASy Swiss-Prot
Match: C75A3_PETHY (Flavonoid 3',5'-hydroxylase 2 OS=Petunia hybrida GN=CYP75A3 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.255e-12
Identity = 37/105 (35.24%), Postives = 58/105 (55.24%), Query Frame = 3
Query:  228 PHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSAKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDEEVNRFM 542
            PH S AK+A+K G I Y+++G    VV S+ + AK  LKT D  F++RP    A H++ G  D+ F+  GP W+  RK+    +L  K + ++  V   E+   +
Sbjct:   53 PHVSLAKMAKKYGAIMYLKVGTCGMVVASTPDAAKAFLKTLDLNFSNRPPNAGATHLAYGAQDMVFAHYGPRWKLLRKLSNLHMLGGKALENWANVRANELGHML 157          
BLAST of FC930919 vs. ExPASy Swiss-Prot
Match: C75A7_EUSGR (Flavonoid 3',5'-hydroxylase OS=Eustoma grandiflorum GN=CYP75A7 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 9.479e-12
Identity = 34/101 (33.66%), Postives = 56/101 (55.45%), Query Frame = 3
Query:  228 PHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSAKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDEEV 530
            PH + A +A+K GP+ Y+++G     V S+ E AK  LKT D  F++RP    A H++    D+ F+  GP W+  RK+    +L  K +  ++ V  +E+
Sbjct:   57 PHVALANMAKKYGPVMYLKVGSCGLAVASTPEAAKAFLKTLDMNFSNRPPNAGATHLAYNAQDMVFADYGPRWKLLRKLSNIHILGGKALQGWEEVRKKEL 157          
BLAST of FC930919 vs. ExPASy Swiss-Prot
Match: C75A5_EUSGR (Flavonoid 3',5'-hydroxylase OS=Eustoma grandiflorum GN=CYP75A5 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 9.479e-12
Identity = 34/101 (33.66%), Postives = 56/101 (55.45%), Query Frame = 3
Query:  228 PHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSAKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDEEV 530
            PH + A +A+K GP+ Y+++G     V S+ E AK  LKT D  F++RP    A H++    D+ F+  GP W+  RK+    +L  K +  ++ V  +E+
Sbjct:   57 PHVALANMAKKYGPVMYLKVGSCGLAVASTPEAAKAFLKTLDMNFSNRPPNAGATHLAYNAQDMVFADYGPRWKLLRKLSNIHILGGKALQGWEEVRKKEL 157          
BLAST of FC930919 vs. ExPASy Swiss-Prot
Match: C71BO_ARATH (Cytochrome P450 71B24 OS=Arabidopsis thaliana GN=CYP71B24 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 9.479e-12
Identity = 43/142 (30.28%), Postives = 70/142 (49.30%), Query Frame = 3
Query:  231 HKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSAKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDEEVNRFMSRVK--ARCGLETDMSDLIFAFCTDFFCLAAFGVRFME 650
            HK    L++K GP+  ++LG +  VV+SS E A++ LK HD    +RP       +     D+  +P G   R+ RK+   +  S  +V SF+ + +EE +  + ++K  A      D+S  +F         +AFG RF E
Sbjct:   47 HKCLHDLSKKHGPVLLLRLGFLDMVVISSTEAAEEALKVHDLECCTRPITNVTSKLWRDGQDIGLAPYGESLRELRKLSFLKFFSTTKVRSFRYIREEENDLMVKKLKEAALKKSSVDLSQTLFGLVGSIIFRSAFGQRFDE 188          
BLAST of FC930919 vs. ExPASy Swiss-Prot
Match: CP17A_FELCA (Steroid 17-alpha-hydroxylase/17,20 lyase OS=Felis catus GN=CYP17A1 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.238e-11
Identity = 41/153 (26.80%), Postives = 73/153 (47.71%), Query Frame = 3
Query:  189 IIGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSAKHVSVGPADVTFSPNGPYWRQARKICV-TELLSPKRVNSFKVVLDEEVNRFMSRVKARCGLETDMSDLIFAFCTDFFCLAAFGVRF 644
            ++G L    +   PHK+F KL +K GPI+  +LG    V+V   +LAK+VL    + F+ RP +++   +S     + F+ +G  W+  RK+ + T  L        + ++  E++     +  + G   D+   +F   T+  CL  F   F
Sbjct:   36 LVGSLLFLPRSGHPHKNFFKLQKKYGPIYSFRLGTKTTVMVGDHQLAKEVLVKKGKEFSGRPHVVTLDILSDNQKGIAFADHGASWQMHRKLALATFALFKDGDQRLEKIICREISLLCDNLAMQDGQSIDLYLPLFLAVTNIICLICFNSSF 188          
BLAST of FC930919 vs. ExPASy Swiss-Prot
Match: CP17A_MOUSE (Steroid 17-alpha-hydroxylase/17,20 lyase OS=Mus musculus GN=Cyp17a1 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.112e-11
Identity = 42/157 (26.75%), Postives = 75/157 (47.77%), Query Frame = 3
Query:  189 IIGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSAKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDEEVNRFMSRVKARCGLETDMSDLIFAFCTDFFCLAAFGVRFMEDED 659
            ++G L    +    H +F KL EK GPI+ ++LG   AV+V   +LA++VL    + F+ RP +++   +S     V F+ +   W+  RK+  +     +     + ++ +E N     +    G   D+S LIF    +  C   F + F E++D
Sbjct:   36 LVGSLPFLPRRGHMHANFFKLQEKYGPIYSLRLGTTTAVIVGHYQLAREVLVKKGKEFSGRPQMVTLGLLSDQGKGVAFADSSSSWQLHRKLVFSTFSLFRDDQKLEKMICQEANSLCDLILTYDGESRDLSTLIFKSVINIICTICFNISF-ENKD 191          
The following BLAST results are available for this feature:
BLAST of FC930919 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 115
Match NameE-valueIdentityDescription
C81E1_GLYEC6.564e-1334.71Isoflavone 2'-hydroxylase OS=Glycyrrhiza echinata ... [more]
C75A2_SOLME1.120e-1235.24Flavonoid 3',5'-hydroxylase OS=Solanum melongena G... [more]
C80B2_ESCCA3.258e-1228.17(S)-N-methylcoclaurine 3'-hydroxylase isozyme 2 OS... [more]
C80B1_ESCCA3.258e-1228.17(S)-N-methylcoclaurine 3'-hydroxylase isozyme 1 (F... [more]
C75A3_PETHY4.255e-1235.24Flavonoid 3',5'-hydroxylase 2 OS=Petunia hybrida G... [more]
C75A7_EUSGR9.479e-1233.66Flavonoid 3',5'-hydroxylase OS=Eustoma grandifloru... [more]
C75A5_EUSGR9.479e-1233.66Flavonoid 3',5'-hydroxylase OS=Eustoma grandifloru... [more]
C71BO_ARATH9.479e-1230.28Cytochrome P450 71B24 OS=Arabidopsis thaliana GN=C... [more]
CP17A_FELCA1.238e-1126.80Steroid 17-alpha-hydroxylase/17,20 lyase OS=Felis ... [more]
CP17A_MOUSE2.112e-1126.75Steroid 17-alpha-hydroxylase/17,20 lyase OS=Mus mu... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC34110D12EF PostHarvP1 Citrus clementina cDNA clone C34110D12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930919 ID=FC930919; Name=FC930919; organism=Citrus clementina; type=EST; length=683bp
GGCACTTAAAGAGAACCACCGACAGCGAGTAGAGAGGAAATTAAGTTGAG
GGACTAATGGCCAACTTTAGCCCCGAAATCCTCTTTCTGTCATTCGTTGT
CTCGACGGCAATCCTCTACATGATTAATAATCGGCGAAGGTCACTGCCAA
ATTCACCGTCACTGCCGTCACCACCAAACAAACTTCCGATAATAGGTCAC
CTTCATCTCTTCTACAAAGAGCGCAAGCCACATAAAAGTTTCGCTAAACT
CGCAGAGAAGCTGGGTCCCATATTTTACATCCAGCTCGGCCGAGTCCCCG
CCGTTGTAGTCTCCTCTAAAGAGCTGGCCAAACAAGTTCTCAAAACTCAC
GACCAGGTCTTCGCCAGCCGCCCAAGCATCCTCAGCGCCAAGCACGTCTC
CGTCGGCCCCGCTGACGTCACCTTCTCCCCCAACGGCCCTTACTGGCGCC
AAGCTCGCAAGATCTGCGTCACCGAGTTACTCAGCCCAAAACGAGTCAAC
TCTTTCAAAGTCGTCCTAGATGAGGAAGTGAACCGGTTTATGAGCCGCGT
GAAAGCCCGCTGTGGGTTAGAAACAGACATGAGTGATCTTATTTTCGCCT
TCTGTACTGATTTCTTTTGCCTTGCAGCATTTGGGGTGAGGTTCATGGAA
GATGAAGACGAANGGCAAAAGAGTAAATACTTG
back to top