FC930919

Overview
NameFC930919
Unique NameFC930919
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length683
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930919 vs. ExPASy Swiss-Prot
Match: CP17A_MESAU (Steroid 17-alpha-hydroxylase/17,20 lyase OS=Mesocricetus auratus GN=CYP17A1 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.758e-11
Identity = 38/153 (24.84%), Postives = 76/153 (49.67%), Query Frame = 3
Query:  189 IIGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSAKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVN-SFKVVLDEEVNRFMSRVKARCGLETDMSDLIFAFCTDFFCLAAFGVRF 644
            ++G L    +   PH +F KL EK GPI+ ++LG    V++   +LAK+VL    + F+ RP +++   +S     + F+ +G  W+  RK+ ++     +  N   + ++ ++ +     +        D+S+ IF   T+  C+  FG+ +
Sbjct:   36 LVGSLPFIPRHGHPHVNFFKLQEKYGPIYSLRLGSTTTVIIGQYQLAKEVLVKKGKEFSGRPHMVTLGLLSDQGKGIAFADSGGSWQLHRKLALSSFALFRDGNQKLEKIICQKASSLCDFLLTHNEESIDLSEPIFNSITNIICIICFGISY 188          
BLAST of FC930919 vs. ExPASy Swiss-Prot
Match: CP17A_SQUAC (Steroid 17-alpha-hydroxylase/17,20 lyase OS=Squalus acanthias GN=CYP17A1 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.602e-11
Identity = 44/161 (27.33%), Postives = 77/161 (47.83%), Query Frame = 3
Query:  189 IIGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSAKHVSVGPADVTFSPNGPYWRQARKICVTEL-LSPKRVNSFKVVLDEEVNRFMSRVKARCGLETDMSDLIFAFCTDFFCLAAFGVRFMEDEDEXQ 668
            +IG L     +  PH  F KL +  G +F + +G   AVV+++ + AK+VL    ++FA RPS+++   +S G  D+ F   GP W+  RK+ ++ L L        + ++ +E     S  +       DM   +    T+  CL  F   + +++ E Q
Sbjct:   41 LIGSLLSLRSDLPPHLLFQKLQKTYGNLFSLMMGPHYAVVINNHQHAKEVLLKKGKIFAGRPSMVTTDLLSRGGKDIAFGKYGPAWKFHRKLVLSALHLFGDGSAGIEKMICQEATSMCSTFERLNNAAHDMMPDVTRAVTNVICLLCFNSTYEKEDPEFQ 201          
BLAST of FC930919 vs. ExPASy Swiss-Prot
Match: CP17A_BOVIN (Steroid 17-alpha-hydroxylase/17,20 lyase OS=Bos taurus GN=CYP17A1 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.704e-11
Identity = 38/157 (24.20%), Postives = 75/157 (47.77%), Query Frame = 3
Query:  189 IIGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSAKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVN-SFKVVLDEEVNRFMSRVKARCGLETDMSDLIFAFCTDFFCLAAFGVRFMEDE 656
            ++G L    +  + HK+F KL EK GPI+  +LG    V++   +LA++VL    + F+ RP + +   +S     + F+ +G +W+  RK+ +      K  N   + ++++E N     +  + G   D+S+ +    T+      F   F  ++
Sbjct:   36 LVGSLPFLPRRGQQHKNFFKLQEKYGPIYSFRLGSKTTVMIGHHQLAREVLLKKGKEFSGRPKVATLDILSDNQKGIAFADHGAHWQLHRKLALNAFALFKDGNLKLEKIINQEANVLCDFLATQHGEAIDLSEPLSLAVTNIISFICFNFSFKNED 192          
BLAST of FC930919 vs. ExPASy Swiss-Prot
Match: CP17A_BISBI (Steroid 17-alpha-hydroxylase/17,20 lyase OS=Bison bison GN=CYP17A1 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.704e-11
Identity = 38/157 (24.20%), Postives = 75/157 (47.77%), Query Frame = 3
Query:  189 IIGHLHLFYKERKPHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSAKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVN-SFKVVLDEEVNRFMSRVKARCGLETDMSDLIFAFCTDFFCLAAFGVRFMEDE 656
            ++G L    +  + HK+F KL EK GPI+  +LG    V++   +LA++VL    + F+ RP + +   +S     + F+ +G +W+  RK+ +      K  N   + ++++E N     +  + G   D+S+ +    T+      F   F  ++
Sbjct:   36 LVGSLPFLPRRGQQHKNFFKLQEKYGPIYSFRLGSKTTVMIGHHQLAREVLLKKGKEFSGRPKVATLDILSDNQKGIAFADHGAHWQLHRKLALNAFALFKDGNLKLEKIINQEANVLCDFLATQHGEAIDLSEPLSLAVTNIISFICFNFSFKNED 192          
BLAST of FC930919 vs. ExPASy Swiss-Prot
Match: C75A1_PETHY (Flavonoid 3',5'-hydroxylase 1 OS=Petunia hybrida GN=CYP75A1 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.024e-11
Identity = 35/105 (33.33%), Postives = 56/105 (53.33%), Query Frame = 3
Query:  228 PHKSFAKLAEKLGPIFYIQLGRVPAVVVSSKELAKQVLKTHDQVFASRPSILSAKHVSVGPADVTFSPNGPYWRQARKICVTELLSPKRVNSFKVVLDEEVNRFM 542
            PH S AK+A+K G I Y+++G     V S+ + AK  LKT D  F++RP    A H++    D+ F+  GP W+  RK+    +L  K + ++  V   E+   +
Sbjct:   53 PHVSLAKMAKKYGAIMYLKVGTCGMAVASTPDAAKAFLKTLDINFSNRPPNAGATHLAYNAQDMVFAHYGPRWKLLRKLSNLHMLGGKALENWANVRANELGHML 157          
The following BLAST results are available for this feature:
BLAST of FC930919 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 115
Match NameE-valueIdentityDescription
CP17A_MESAU2.758e-1124.84Steroid 17-alpha-hydroxylase/17,20 lyase OS=Mesocr... [more]
CP17A_SQUAC3.602e-1127.33Steroid 17-alpha-hydroxylase/17,20 lyase OS=Squalu... [more]
CP17A_BOVIN4.704e-1124.20Steroid 17-alpha-hydroxylase/17,20 lyase OS=Bos ta... [more]
CP17A_BISBI4.704e-1124.20Steroid 17-alpha-hydroxylase/17,20 lyase OS=Bison ... [more]
C75A1_PETHY8.024e-1133.33Flavonoid 3',5'-hydroxylase 1 OS=Petunia hybrida G... [more]

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Properties
Property NameValue
Genbank descriptionC34110D12EF PostHarvP1 Citrus clementina cDNA clone C34110D12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930919 ID=FC930919; Name=FC930919; organism=Citrus clementina; type=EST; length=683bp
GGCACTTAAAGAGAACCACCGACAGCGAGTAGAGAGGAAATTAAGTTGAG
GGACTAATGGCCAACTTTAGCCCCGAAATCCTCTTTCTGTCATTCGTTGT
CTCGACGGCAATCCTCTACATGATTAATAATCGGCGAAGGTCACTGCCAA
ATTCACCGTCACTGCCGTCACCACCAAACAAACTTCCGATAATAGGTCAC
CTTCATCTCTTCTACAAAGAGCGCAAGCCACATAAAAGTTTCGCTAAACT
CGCAGAGAAGCTGGGTCCCATATTTTACATCCAGCTCGGCCGAGTCCCCG
CCGTTGTAGTCTCCTCTAAAGAGCTGGCCAAACAAGTTCTCAAAACTCAC
GACCAGGTCTTCGCCAGCCGCCCAAGCATCCTCAGCGCCAAGCACGTCTC
CGTCGGCCCCGCTGACGTCACCTTCTCCCCCAACGGCCCTTACTGGCGCC
AAGCTCGCAAGATCTGCGTCACCGAGTTACTCAGCCCAAAACGAGTCAAC
TCTTTCAAAGTCGTCCTAGATGAGGAAGTGAACCGGTTTATGAGCCGCGT
GAAAGCCCGCTGTGGGTTAGAAACAGACATGAGTGATCTTATTTTCGCCT
TCTGTACTGATTTCTTTTGCCTTGCAGCATTTGGGGTGAGGTTCATGGAA
GATGAAGACGAANGGCAAAAGAGTAAATACTTG
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