FC930921

Overview
NameFC930921
Unique NameFC930921
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length707
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930921 vs. ExPASy Swiss-Prot
Match: FL3H_PETHY (Naringenin,2-oxoglutarate 3-dioxygenase (Fragment) OS=Petunia hybrida GN=AN3 PE=1 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 6.140e-17
Identity = 59/197 (29.95%), Postives = 92/197 (46.70%), Query Frame = 3
Query:  123 EPSTIPERFVRDLTERPSSLATALSPPGGIPIINLSKL--MKGNHDEFHNEILNLATACEEWGFFQVIDHGIELNLLENIEKVAKDFFMLPLEEKKKYPMLPGTVQGYGQAFVFSENQKLDWCNMFALGVEPHFIRNPKLWPAKPAEFSETLETYSRDVRKLCQCLLKYVAISLGLKAETFEEMFGVCCAAVRMNYY 707
            E  T+   F+RD  ERP       S    IPII+L  +    G   E  ++I+    ACE+WG FQV+DHG++  ++  +   AK+FF LP EEK ++ M  G   G+  +         DW  +      P   R+   WP KP  +    + YS  + +L   LL  ++ ++GL+ E   +        V +N+Y
Sbjct:   14 EEKTLQTSFIRDEDERPKVAYNQFS--NEIPIISLEGIDDETGKRAEICDKIVK---ACEDWGVFQVVDHGVDAEVISQMTTFAKEFFALPPEEKLRFDMSGGKKGGFIVSSHLQGEVVQDWREIVTYFSYPTRARDYSRWPDKPEGWIAVTQKYSEKLMELACKLLDVLSEAMGLEKEALTKACVDMDQKVVVNFY 205          
BLAST of FC930921 vs. ExPASy Swiss-Prot
Match: GAOX2_ORYSJ (Gibberellin 20 oxidase 2 OS=Oryza sativa subsp. japonica GN=20ox2 PE=1 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.047e-16
Identity = 61/209 (29.19%), Postives = 96/209 (45.93%), Query Frame = 3
Query:  117 KVEPSTIPERFVRDLTE-RPSSLATALSPPGGIPIINLSKLMKGNHDEFHNEILNLATACEEWGFFQVIDHGIELNLLENIEKVAKDFFMLPLEEKKKYPMLPGTVQGYGQAFVFSENQKLDWCNMFALGVEPHFIRNPKLWPAKPAEFSETL-----------ETYSRDVRKLCQCLLKYVAISLGLKAETFEEMFGVCCAAVRMNYY 707
            ++EP  IPE FV    + RP+S A        +P++++  L  G+ +        +A AC   GFFQV +HG++  L       A DFF LPL EK++   +PGTV GY  A       KL W    + G       +    P     FS TL           + Y  ++++L   +++ + +SLG++   + E F    + +R NYY
Sbjct:   37 RMEPK-IPEPFVWPNGDARPASAAEL-----DMPVVDVGVLRDGDAEGLRRAAAQVAAACATHGFFQVSEHGVDAALARAALDGASDFFRLPLAEKRRARRVPGTVSGYTSAHADRFASKLPWKETLSFG-----FHDRAAAPVVADYFSSTLGPDFAPMGRVYQKYCEEMKELSLTIMELLELSLGVERGYYREFFADSSSIMRCNYY 234          
BLAST of FC930921 vs. ExPASy Swiss-Prot
Match: GAOX2_ORYSI (Gibberellin 20 oxidase 2 OS=Oryza sativa subsp. indica GN=20ox2 PE=1 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.047e-16
Identity = 61/209 (29.19%), Postives = 96/209 (45.93%), Query Frame = 3
Query:  117 KVEPSTIPERFVRDLTE-RPSSLATALSPPGGIPIINLSKLMKGNHDEFHNEILNLATACEEWGFFQVIDHGIELNLLENIEKVAKDFFMLPLEEKKKYPMLPGTVQGYGQAFVFSENQKLDWCNMFALGVEPHFIRNPKLWPAKPAEFSETL-----------ETYSRDVRKLCQCLLKYVAISLGLKAETFEEMFGVCCAAVRMNYY 707
            ++EP  IPE FV    + RP+S A        +P++++  L  G+ +        +A AC   GFFQV +HG++  L       A DFF LPL EK++   +PGTV GY  A       KL W    + G       +    P     FS TL           + Y  ++++L   +++ + +SLG++   + E F    + +R NYY
Sbjct:   37 RMEPK-IPEPFVWPNGDARPASAAEL-----DMPVVDVGVLRDGDAEGLRRAAAQVAAACATHGFFQVSEHGVDAALARAALDGASDFFRLPLAEKRRARRVPGTVSGYTSAHADRFASKLPWKETLSFG-----FHDRAAAPVVADYFSSTLGPDFAPMGRVYQKYCEEMKELSLTIMELLELSLGVERGYYREFFADSSSIMRCNYY 234          
BLAST of FC930921 vs. ExPASy Swiss-Prot
Match: LDOX_PETHY (Leucoanthocyanidin dioxygenase OS=Petunia hybrida GN=ANT17 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 8.866e-16
Identity = 49/171 (28.65%), Postives = 82/171 (47.95%), Query Frame = 3
Query:  210 IPIINLSKLMKGNHDEFHNEILNLATACEEWGFFQVIDHGIELNLLENIEKVAKDFFMLPLEEKKKYP--MLPGTVQGYGQAFVFSENQKLDWCNMFALGVEPHFIRNPKLWPAKPAEFSETLETYSRDVRKLCQCLLKYVAISLGLKAETFEEMFG---VCCAAVRMNYY 707
            +P I+L ++      E   +   L  A  EWG   +++HGI   L+  ++   + FF  P+EEK+KY      G VQGYG     S   +L+W + F     P   R+  +WP  P +++     Y++ +R L   +L  ++I LGL+    E+  G        +++NYY
Sbjct:   52 VPTIDLKEI-DSEDKEIREKCHQLKKAAMEWGVMHLVNHGISDELINRVKVAGETFFDQPVEEKEKYANDQANGNVQGYGSKLANSACGQLEWEDYFFHCAFPEDKRDLSIWPKNPTDYTPATSEYAKQIRALATKILTVLSIGLGLEEGRLEKEVGGMEDLLLQMKINYY 221          
BLAST of FC930921 vs. ExPASy Swiss-Prot
Match: FLS_PETCR (Flavonol synthase/flavanone 3-hydroxylase OS=Petroselinum crispum GN=FLS PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.512e-15
Identity = 59/212 (27.83%), Postives = 103/212 (48.58%), Query Frame = 3
Query:   90 QIDDVQELRKVEP--STIPERFVRDLTERPSSLATALSPPGGIPIINLSKLMKGNHDEFHNEILNLATACEEWGFFQVIDHGIELNLLENIEKVAKDFFMLPLEEKKKYPMLPG--TVQGYGQAFVFSENQKLDWCNMFALGVEPHFIRNPKLWPAKPAEFSETLETYSRDVRKLCQCLLKYVAISLGLKAETFEEMFG--VCCAAVRMNYY 707
            +++ VQ + K+     TIP  ++R  +E+P+ + T       +P+I+L      N+ E  N +  +A A  EWG FQV++HGI  + +  ++KV K+FF LP +EK+      G   V+GYG         K  W +     + P    N   WP  P  + E  E Y+  +R +   L + +++ +GL+    ++  G       +++NYY
Sbjct:    2 EVERVQAISKMSRCMDTIPSEYIRSESEQPA-VTTMQGVVLQVPVIDLGS---SNNTE-ENLVELIAEASREWGIFQVVNHGIPDDAIAKLQKVGKEFFELPQQEKEVIAKPEGYQGVEGYGTKLQKELGGKKGWVDHLFHIIWPKSAVNYNFWPNNPPLYREANEEYAVALRGVVDKLFEALSLGIGLEKHELKKASGGDDLIYMLKINYY 208          
BLAST of FC930921 vs. ExPASy Swiss-Prot
Match: FL3H_VITVI (Naringenin,2-oxoglutarate 3-dioxygenase OS=Vitis vinifera GN=F3H PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.975e-15
Identity = 56/195 (28.72%), Postives = 91/195 (46.67%), Query Frame = 3
Query:  132 TIPERFVRDLTERPSSLATALSPPGGIPIINLSK---LMKGNHDEFHNEILNLATACEEWGFFQVIDHGIELNLLENIEKVAKDFFMLPLEEKKKYPMLPGTVQGYGQAFVFSENQKLDWCNMFALGVEPHFIRNPKLWPAKPAEFSETLETYSRDVRKLCQCLLKYVAISLGLKAETFEEMFGVCCAAVRMNYY 707
            T+   FVRD  ERP       S    IP+I+L+K    +    DE   +I+    ACE+WG FQV++HG++ NL+  + ++A++FF LP EE  ++ M  G   G+  +         DW  +      P   R+   WP KP  +    + YS  +  L   LL+ ++ ++ L  +            V +N+Y
Sbjct:   14 TLQSSFVRDEDERPKVAYNDFS--NEIPVISLTKESMKLAAVVDEICRKIVE---ACEDWGIFQVVNHGVDSNLISEMTRLAREFFALPPEENVRFDMSGGKKGGFIVSSHLQGEAVQDWREIVTYFSYPLRTRDYSRWPDKPEGWRSVTQEYSEKLMGLACKLLEVLSEAMDLDKDALTNACVDMDQKVVVNFY 203          
BLAST of FC930921 vs. ExPASy Swiss-Prot
Match: HY6H_HYONI (Hyoscyamine 6-dioxygenase OS=Hyoscyamus niger GN=H6H PE=1 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.580e-15
Identity = 59/188 (31.38%), Postives = 88/188 (46.81%), Query Frame = 3
Query:  132 TIPERFVRDLTERPSSLATALSPPGG-IPIINLSKLMKGNHDEFHNEILNLATACEEWGFFQVIDHGIELNLLENIEKVAKDFFMLPLEEKKKYP----------MLPGTVQGYGQAFVFSENQKLDWCNMFALGVEPHFIRNPKLWPAKPAEFSETLETYSRDVRKLCQCLLKYVAISLGLKAETFE 662
            ++ E F+  L +R    A    P G  +PII+L +         H  +  +  AC+++G FQVI+HG    L+    +V K+FF LP EEK+K+            L    + Y +    S  + L W +  A G  P        WP KPA++ E +  YS +VRKL   +L Y+   LGLK   F+
Sbjct:   12 SVSESFIAPLQKR----AEKDVPVGNDVPIIDLQQ-------HHHLLVQQITKACQDFGLFQVINHGFPEELMLETMEVCKEFFALPAEEKEKFKPKGEAAKFELPLEQKAKLYVEGEQLSNEEFLYWKDTLAHGCHPLDQDLVNSWPEKPAKYREVVAKYSVEVRKLTMRMLDYICEGLGLKLGYFD 188          
BLAST of FC930921 vs. ExPASy Swiss-Prot
Match: ACCO_MUSAC (1-aminocyclopropane-1-carboxylate oxidase OS=Musa acuminata GN=MAO1B PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.580e-15
Identity = 50/158 (31.65%), Postives = 86/158 (54.43%), Query Frame = 3
Query:  210 IPIINLSKLMKGNHDEFHNEILNLATACEEWGFFQVIDHGIELNLLENIEKVAKDFFMLPLE--EKKKYPMLPGTV--QGYGQAFVFSENQKLDWCNMFALGVEPHFIRNPKLWPAKPAEFSETLETYSRDVRKLCQCLLKYVAISLGLKAETFEEMF 671
            IP+I+ SKL   +  E    +  +A  CEEWGFFQ+++HGI + LLE ++KV+ + + L  E  E  K   L  T+  +G GQ         +DW ++F L       ++   WP+ P +F ET++ Y  ++RKL + +++ +  +LG +    ++ F
Sbjct:    3 IPVIDFSKL---DGKERAETMARIANGCEEWGFFQLVNHGIPVELLERVKKVSSECYKLREERFEGSKPVQLLDTLVKEGDGQRL-----DNVDWEDVFVL-------QDDNEWPSNPPDFEETMKEYREEIRKLAEKMMEVMDENLGFEKGCIKKAF 145          
BLAST of FC930921 vs. ExPASy Swiss-Prot
Match: LDOX_VITVI (Leucoanthocyanidin dioxygenase OS=Vitis vinifera PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 8.298e-14
Identity = 43/148 (29.05%), Postives = 74/148 (50.00%), Query Frame = 3
Query:  279 LATACEEWGFFQVIDHGIELNLLENIEKVAKDFFMLPLEEKKKY--PMLPGTVQGYGQAFVFSENQKLDWCNMFALGVEPHFIRNPKLWPAKPAEFSETLETYSRDVRKLCQCLLKYVAISLGLKAETFEEMFG---VCCAAVRMNYY 707
            L  A  EWG   +++HGI  +L+  ++   + FF LP+EEK+KY      G + GYG     + + +L+W + F   + P   R+  +WP  P+++      YS  +R L   +L  +++ LGL+    E+  G         ++NYY
Sbjct:   76 LKKAAMEWGVMHLVNHGISDDLINRVKVAGETFFNLPMEEKEKYANDQASGKIAGYGSKLANNASGQLEWEDYFFHLIFPEDKRDMTIWPKTPSDYVPATCEYSVKLRSLATKILSVLSLGLGLEEGRLEKEVGGMEELLLQKKINYY 223          
BLAST of FC930921 vs. ExPASy Swiss-Prot
Match: G3OX1_ARATH (Gibberellin 3-beta-dioxygenase 1 OS=Arabidopsis thaliana GN=GA4 PE=1 SV=2)

HSP 1 Score: 77.0258 bits (188), Expect = 1.084e-13
Identity = 64/215 (29.77%), Postives = 93/215 (43.26%), Query Frame = 3
Query:  126 PSTIPERFVRDLT---ERPSS----------LATALSPPG---GIPIINLSKLMKGNHDEFHNEILNLATACEEWGFFQVIDHGIELNLLENIEKVAKDFFMLPLEEKKKYPMLPGTVQGYGQAFVFSENQKLDWCNMFALGVEPHFIRNPKLWPAKPAEFSETLETYSRDVRKLCQCLLKYVAISLGLKAETFE-----EMFGVCCAAVRMNYY 707
            P  +P   + D T   E P S           + A SPP     IP+I+L      +H +  N+I     AC  WG FQ+ +HG+ L LL++IE +    F LP++ K K       V GYG A + S   K  W   F +   P      KLWP     + + +E Y   ++KL   L+     SLG+  E  E            AA+++N+Y
Sbjct:   13 PIHLPHSHIPDFTSLRELPDSYKWTPKDDLLFSAAPSPPATGENIPLIDL------DHPDATNQI---GHACRTWGAFQISNHGVPLGLLQDIEFLTGSLFGLPVQRKLKSARSETGVSGYGVARIASFFNKQMWSEGFTITGSP-LNDFRKLWPQHHLNYCDIVEEYEEHMKKLASKLMWLALNSLGVSEEDIEWASLSSDLNWAQAALQLNHY 217          
The following BLAST results are available for this feature:
BLAST of FC930921 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 42
Match NameE-valueIdentityDescription
FL3H_PETHY6.140e-1729.95Naringenin,2-oxoglutarate 3-dioxygenase (Fragment)... [more]
GAOX2_ORYSJ3.047e-1629.19Gibberellin 20 oxidase 2 OS=Oryza sativa subsp. ja... [more]
GAOX2_ORYSI3.047e-1629.19Gibberellin 20 oxidase 2 OS=Oryza sativa subsp. in... [more]
LDOX_PETHY8.866e-1628.65Leucoanthocyanidin dioxygenase OS=Petunia hybrida ... [more]
FLS_PETCR1.512e-1527.83Flavonol synthase/flavanone 3-hydroxylase OS=Petro... [more]
FL3H_VITVI1.975e-1528.72Naringenin,2-oxoglutarate 3-dioxygenase OS=Vitis v... [more]
HY6H_HYONI2.580e-1531.38Hyoscyamine 6-dioxygenase OS=Hyoscyamus niger GN=H... [more]
ACCO_MUSAC2.580e-1531.651-aminocyclopropane-1-carboxylate oxidase OS=Musa ... [more]
LDOX_VITVI8.298e-1429.05Leucoanthocyanidin dioxygenase OS=Vitis vinifera P... [more]
G3OX1_ARATH1.084e-1329.77Gibberellin 3-beta-dioxygenase 1 OS=Arabidopsis th... [more]

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Properties
Property NameValue
Genbank descriptionC34110E02EF PostHarvP1 Citrus clementina cDNA clone C34110E02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930921 ID=FC930921; Name=FC930921; organism=Citrus clementina; type=EST; length=707bp
TCATATATTTTTCTTTAGTTGCAGTTAGATTATCGCTTCAAAACTCTGTT
TCCATGGCTCCAGTACCAACTTTTCCCGTCAAAGTTGGTCAAATAGATGA
TGTTCAAGAGCTGAGAAAAGTCGAACCTAGCACAATTCCTGAAAGATTTG
TTAGAGACTTGACTGAAAGGCCATCGTCACTGGCTACAGCTCTTTCTCCA
CCTGGTGGCATTCCCATCATCAACCTCTCAAAACTCATGAAGGGCAACCA
CGATGAATTTCACAATGAAATTTTAAACCTCGCAACTGCCTGCGAAGAGT
GGGGATTCTTTCAGGTGATTGACCATGGGATTGAACTGAACTTACTCGAG
AACATAGAGAAGGTGGCCAAAGATTTTTTCATGCTACCTTTAGAAGAGAA
AAAGAAGTACCCCATGCTACCAGGGACAGTTCAAGGATATGGGCAAGCTT
TTGTGTTCTCGGAGAACCAAAAACTTGATTGGTGCAACATGTTTGCCCTT
GGTGTCGAGCCTCACTTTATCAGGAACCCAAAACTCTGGCCAGCAAAGCC
AGCTGAGTTCAGTGAAACTCTAGAGACTTACTCAAGAGATGTGAGAAAAC
TTTGCCAGTGTCTGCTCAAGTACGTAGCAATAAGCCTTGGCTTGAAAGCA
GAAACTTTTGAAGAAATGTTTGGGGTTTGCTGTGCAGCTGTGAGGATGAA
CTACTAC
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