FC930925

Overview
NameFC930925
Unique NameFC930925
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length692
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930925 vs. ExPASy Swiss-Prot
Match: SAHH_CORGL (Adenosylhomocysteinase OS=Corynebacterium glutamicum GN=ahcY PE=3 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 8.159e-43
Identity = 92/184 (50.00%), Postives = 116/184 (63.04%), Query Frame = 1
Query:  163 EFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDH--------XXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKAD 690
            +FKV DLS A+ GR +I LAE EMPGLM  R EF   QP KGA+I GS+HMT+QTAVLIETLTALGAEVRW SCNIFSTQD                       WKGE+L+EYWWC  +   WG    P++I+DDGGDAT+ +  G +    YE+ G +P   + D+ E+   L ++R+ L A+
Sbjct:    2 DFKVADLSLAEAGRHQIRLAEYEMPGLMQLRKEFADEQPLKGARIAGSIHMTVQTAVLIETLTALGAEVRWASCNIFSTQDEAAAAIVVGSGTVEEPAGVPVFAWKGESLEEYWWCINQIFSWG-DELPNMILDDGGDATMAVIRGRE----YEQAGLVPPAEANDSDEYIAFLGMLREVLAAE 180          
BLAST of FC930925 vs. ExPASy Swiss-Prot
Match: SAHH_CORGB (Adenosylhomocysteinase OS=Corynebacterium glutamicum (strain R) GN=ahcY PE=3 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 8.159e-43
Identity = 92/184 (50.00%), Postives = 116/184 (63.04%), Query Frame = 1
Query:  163 EFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDH--------XXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKAD 690
            +FKV DLS A+ GR +I LAE EMPGLM  R EF   QP KGA+I GS+HMT+QTAVLIETLTALGAEVRW SCNIFSTQD                       WKGE+L+EYWWC  +   WG    P++I+DDGGDAT+ +  G +    YE+ G +P   + D+ E+   L ++R+ L A+
Sbjct:    6 DFKVADLSLAEAGRHQIRLAEYEMPGLMQLRKEFADEQPLKGARIAGSIHMTVQTAVLIETLTALGAEVRWASCNIFSTQDEAAAAIVVGSGTVEEPAGVPVFAWKGESLEEYWWCINQIFSWG-DELPNMILDDGGDATMAVIRGRE----YEQAGLVPPAEANDSDEYIAFLGMLREVLAAE 184          
BLAST of FC930925 vs. ExPASy Swiss-Prot
Match: SAHH_ACIAC (Adenosylhomocysteinase OS=Acidovorax avenae subsp. citrulli (strain AAC00-1) GN=ahcY PE=3 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 8.159e-43
Identity = 87/147 (59.18%), Postives = 107/147 (72.79%), Query Frame = 1
Query:  163 EFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWG----PGGGPDLIVDDGGDATLLIHEGVKAEE 591
            +  + D+S AD+GR EI++AE EMPGLMA R EF  +QP KGA+ITGSLHMTIQTAVLIETL ALGA+VRW SCNIFSTQDH               KGE+L++YW  T +  D+G    PG GP++I+DDGGDATLL+H G +AE+
Sbjct:   10 DLAIADISLADWGRKEIKIAETEMPGLMAIREEFAAAQPLKGARITGSLHMTIQTAVLIETLKALGADVRWASCNIFSTQDHAAAAIAAGGTPVFAIKGESLEDYWDYTHRIFDFGAKGTPGEGPNMILDDGGDATLLMHLGQRAEK 156          
BLAST of FC930925 vs. ExPASy Swiss-Prot
Match: SAHH_XYLFA (Adenosylhomocysteinase OS=Xylella fastidiosa GN=ahcY PE=3 SV=2)

HSP 1 Score: 173.326 bits (438), Expect = 1.066e-42
Identity = 89/180 (49.44%), Postives = 118/180 (65.56%), Query Frame = 1
Query:  145 KSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDW----GPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIR 672
            +++    +K+ D+S  D+GR EI++AE EMPGLM+ R ++   QP KG ++TGSLHMTIQTAVLIETL  +GA+VRW SCNIFSTQDH              WKGETL+EYW CT +AL +    G   GP+LIVDDGGDATLLIH+G + E      G       +D+ E Q++  +++
Sbjct:    6 QTSPNTHYKIADISLTDWGRKEIDIAEHEMPGLMSIRRKYASKQPLKGVRVTGSLHMTIQTAVLIETLKDIGADVRWASCNIFSTQDHAAAAIATSGTPVFAWKGETLEEYWDCTLQALTFTLSDGTLTGPELIVDDGGDATLLIHKGYELE-----NGSTWVDEPSDSLEEQVIKRLLK 180          
BLAST of FC930925 vs. ExPASy Swiss-Prot
Match: SAHH_TRIVA (Adenosylhomocysteinase OS=Trichomonas vaginalis PE=3 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 1.066e-42
Identity = 93/193 (48.19%), Postives = 117/193 (60.62%), Query Frame = 1
Query:  145 KSASGR--EFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQD---------HXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKAD 690
            KS +G   E+++ D++    GR E+ LAE EMPGLM  R  +  S+P KG +I+GSLHMT+QTAVLIETLTALGA+VRW SCNIFSTQD                        WKGETL EYW  T +AL W  G GP  +VDDGGDATLLI +G +    +E  G +P+P   DN E++ VL  ++     D
Sbjct:    4 KSPAGAPFEYRIADINLHVLGRKELTLAEKEMPGLMVLRERYSASKPLKGVRISGSLHMTVQTAVLIETLTALGADVRWASCNIFSTQDTAAAAIVVGPTGTPEKPAGIPVFAWKGETLPEYWENTYRALTWPDGQGPQQVVDDGGDATLLISKGFE----FETAGAVPEPTEADNLEYRCVLATLKQVFNQD 192          
BLAST of FC930925 vs. ExPASy Swiss-Prot
Match: SAHH_RHOCA (Adenosylhomocysteinase OS=Rhodobacter capsulatus GN=ahcY PE=3 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 1.066e-42
Identity = 91/158 (57.59%), Postives = 109/158 (68.99%), Query Frame = 1
Query:  163 EFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTD 636
            ++ VKD+  A+FGR E+++AE EMPGLMACR EFGPSQP KGA+I GSLHMTIQTAVLIETL ALGA+VRW SCNIFSTQDH               KGETL+EYW  T+K   + P G  ++I+DDGGDATL I  G + E    +T  +  P S D
Sbjct:    3 DYIVKDIKLAEFGRKELDIAETEMPGLMACREEFGPSQPLKGARIAGSLHMTIQTAVLIETLKALGADVRWASCNIFSTQDHAAAAIAAGGTPVFAVKGETLEEYWAYTDKIFQF-PEGTCNMILDDGGDATLYILLGARVEA--GETDLIATPTSED 157          
BLAST of FC930925 vs. ExPASy Swiss-Prot
Match: SAHH_METCA (Adenosylhomocysteinase OS=Methylococcus capsulatus GN=ahcY PE=3 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 1.066e-42
Identity = 88/152 (57.89%), Postives = 107/152 (70.39%), Query Frame = 1
Query:  136 SVQKSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEE 591
            +V  +AS  + KV DLS A +GR EI +AE EMPGLMA R E+  +QP KGA+I GSLHMTIQTAVLIETL ALGAEVRW SCNIFSTQDH              +KGE+L +YW  T + L+W    GP++I+DDGGDATLL+  G +AE+
Sbjct:    3 AVANAASFDDHKVADLSLAGWGRKEIAIAETEMPGLMAIREEYRAAQPLKGARIAGSLHMTIQTAVLIETLVALGAEVRWASCNIFSTQDHAAAAIAADGIPVFAYKGESLDDYWEYTHRILEWPGDVGPNMILDDGGDATLLVTLGARAEK 154          
BLAST of FC930925 vs. ExPASy Swiss-Prot
Match: SAHH_SYNPX (Adenosylhomocysteinase OS=Synechococcus sp. (strain WH8102) GN=ahcY PE=3 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 1.392e-42
Identity = 84/145 (57.93%), Postives = 103/145 (71.03%), Query Frame = 1
Query:  157 GREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEE 591
            G +  + D++QA FGR E+++AE EMPGLMA R ++G  +P KGA+I GSLHMTIQTA LIETL  LGAEVRW SCNIFSTQDH               KGETL+EYW  T + L+WG GG P++I+DDGGDAT L+  G KAE+
Sbjct:   14 GVDCVIADINQAAFGRKELDIAETEMPGLMALREKYGTEKPLKGARIAGSLHMTIQTACLIETLVELGAEVRWASCNIFSTQDHAAAAIAAQNIPVFAVKGETLEEYWEYTHRILEWGDGGSPNMILDDGGDATGLVMLGSKAEQ 158          
BLAST of FC930925 vs. ExPASy Swiss-Prot
Match: SAHH_AZOSE (Adenosylhomocysteinase OS=Azoarcus sp. (strain EbN1) GN=ahcY PE=3 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 1.818e-42
Identity = 94/176 (53.41%), Postives = 114/176 (64.77%), Query Frame = 1
Query:  163 EFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKAD 690
            ++ V DL+ A +GR EI +AE EMPGLMA R EF   QP KGA+ITGSLHMTIQTAVLIETLTALGAEVRW SCNIFSTQDH               KGE+L +YW  T +  +W  GG  ++I+DDGGDATLL+H G +AE   +    L  P S    E +++   IR  L +D
Sbjct:   10 DYVVADLALAGWGRKEIRIAETEMPGLMAIREEFAVVQPLKGARITGSLHMTIQTAVLIETLTALGAEVRWASCNIFSTQDHAAAAIAASGVPVFAVKGESLADYWDYTHRIFEWRDGGYSNMILDDGGDATLLLHLGARAE---KDVSVLAKPGS---EEERVLFAAIRAKLASD 179          
BLAST of FC930925 vs. ExPASy Swiss-Prot
Match: SAHH_ACISJ (Adenosylhomocysteinase OS=Acidovorax sp. (strain JS42) GN=ahcY PE=3 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 1.818e-42
Identity = 88/144 (61.11%), Postives = 103/144 (71.53%), Query Frame = 1
Query:  172 VKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGP----GGGPDLIVDDGGDATLLIHEGVKAEE 591
            + D+S AD+GR EI +AE EMPGLMA R EF   QP KGA+ITGSLHMTIQTAVLIETL ALGA+VRW SCNIFSTQDH               KGETL +YW  T +  D+GP    G GP++I+DDGGDATLL+H G +AE+
Sbjct:   13 IADISLADWGRKEIRIAETEMPGLMAIREEFAAKQPLKGARITGSLHMTIQTAVLIETLKALGADVRWASCNIFSTQDHAAAAIAATGTPVFAIKGETLVDYWDYTHRIFDFGPKGSEGEGPNMILDDGGDATLLMHLGKRAEK 156          
The following BLAST results are available for this feature:
BLAST of FC930925 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 235
Match NameE-valueIdentityDescription
SAHH_CORGL8.159e-4350.00Adenosylhomocysteinase OS=Corynebacterium glutamic... [more]
SAHH_CORGB8.159e-4350.00Adenosylhomocysteinase OS=Corynebacterium glutamic... [more]
SAHH_ACIAC8.159e-4359.18Adenosylhomocysteinase OS=Acidovorax avenae subsp.... [more]
SAHH_XYLFA1.066e-4249.44Adenosylhomocysteinase OS=Xylella fastidiosa GN=ah... [more]
SAHH_TRIVA1.066e-4248.19Adenosylhomocysteinase OS=Trichomonas vaginalis PE... [more]
SAHH_RHOCA1.066e-4257.59Adenosylhomocysteinase OS=Rhodobacter capsulatus G... [more]
SAHH_METCA1.066e-4257.89Adenosylhomocysteinase OS=Methylococcus capsulatus... [more]
SAHH_SYNPX1.392e-4257.93Adenosylhomocysteinase OS=Synechococcus sp. (strai... [more]
SAHH_AZOSE1.818e-4253.41Adenosylhomocysteinase OS=Azoarcus sp. (strain EbN... [more]
SAHH_ACISJ1.818e-4261.11Adenosylhomocysteinase OS=Acidovorax sp. (strain J... [more]

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Properties
Property NameValue
Genbank descriptionC34110E06EF PostHarvP1 Citrus clementina cDNA clone C34110E06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930925 ID=FC930925; Name=FC930925; organism=Citrus clementina; type=EST; length=692bp
GGCTCACACCCACTCTATCTCTCTCGCTTGTACAATCATTCACTTTGTTT
GGTTGGTTTCCAAAGAGAGAGTAGAGTGCCCTCTCTTCCTTCTTCCTTTT
AGATCTATCAATTCTATTAATAAGCCATGGCTTTGTCCGTCCAGAAATCC
GCTAGCGGTCGTGAATTCAAGGTGAAGGATCTGTCCCAGGCTGACTTCGG
CCGCCTCGAAATCGAGTTGGCCGAAGTCGAAATGCCGGGGCTCATGGCTT
GCCGCGCCGAGTTCGGCCCTTCACAGCCCTTCAAAGGAGCCAAGATCACC
GGTTCACTCCACATGACCATCCAGACCGCCGTCCTCATCGAGACCCTCAC
CGCTCTCGGCGCCGAAGTCCGCTGGTGCTCCTGCAACATCTTCTCAACCC
AAGACCACGCGGCCGCCGCCATCGCACGTGACTCCGCCTCCGTCTTTGCC
TGGAAGGGTGAGACCCTCCAGGAGTACTGGTGGTGCACGGAGAAAGCCCT
GGACTGGGGTCCCGGCGGCGGCCCAGATCTCATCGTCGATGACGGTGGTG
ACGCCACGTTGTTGATCCACGAGGGAGTCAAAGCTGAGGAGATCTACGAG
AAGACCGGGAAGTTGCCCGACCCGGCCTCCACCGACAACGCCGAGTTTCA
GATTGTTTTGACTATCATTAGAGATGGGTTGAAGGCCGATCC
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